RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 SLC12A8A0AV02 714 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 OR6C65A6NJZ3 312 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 TTC34A8MYJ7 566 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 GPR89AB7ZAQ6 455 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 H0YIV9 168 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 ADAMTS3O15072 1205 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 ULK1O75385 1050 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 KRT34O76011 436 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 PGM3O95394 542 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 POP4O95707 220 aaKnown RBP6.95□□□□□ -1.3
COPS3-216ENST00000579716 ZFYP08048 801 aaPredicted RBP6.95□□□□□ -1.3
COPS3-216ENST00000579716 LTA4HP09960 611 aaKnown RBP6.95□□□□□ -1.3
COPS3-216ENST00000579716 GPR89BP0CG08 455 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 ATP5JP18859 108 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 CYP7A1P22680 504 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 EEF1DP29692 281 aaKnown RBP6.95□□□□□ -1.3
COPS3-216ENST00000579716 ID4P47928 161 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 NR1H2P55055 460 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 OLR1P78380 273 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 CYP4F8P98187 520 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 MTX1Q13505 466 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 TAF5Q15542 800 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 TOR1AIP1Q5JTV8 583 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 INTS3Q68E01 1043 aaKnown RBP6.95□□□□□ -1.3
COPS3-216ENST00000579716 NEK5Q6P3R8 708 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 TAOK1Q7L7X3 1001 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 PRPF39Q86UA1 669 aaKnown RBP6.95□□□□□ -1.3
COPS3-216ENST00000579716 LRRTM4Q86VH4 590 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 SESTD1Q86VW0 696 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 C10orf53Q8N6V4 93 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 ZNF527Q8NB42 609 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 GOLM1Q8NBJ4 401 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 PDZD8Q8NEN9 1154 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 EXOC2Q96KP1 924 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 RHOVQ96L33 236 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 DACH2Q96NX9 599 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 KIFC3Q9BVG8 833 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 MTFR1LQ9H019 292 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 NUP62CLQ9H1M0 184 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 SMOC1Q9H4F8 434 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.95□□□□□ -1.3
COPS3-216ENST00000579716 FKBP14Q9NWM8 211 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 IL19Q9UHD0 177 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 L1RE1Q9UN81 338 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 POLHQ9Y253 713 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 WDR19Q8NEZ3 1342 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 KANK1Q14678 1352 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 ROBO2Q9HCK4 1378 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 UPK3BL1B0FP48 263 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.94□□□□□ -1.3
COPS3-216ENST00000579716 UPK3BL2E5RIL1 263 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 STMND1H3BQB6 276 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 VWA5AO00534 786 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 DYNC1I1O14576 645 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 DNAJC8O75937 253 aaPredicted RBP6.94□□□□□ -1.3
COPS3-216ENST00000579716 TMIGD3P0DMS9 266 aaPredicted RBP6.94□□□□□ -1.3
COPS3-216ENST00000579716 CKMT1AP12532 417 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 PORP16435 677 aaPredicted RBP6.94□□□□□ -1.3
COPS3-216ENST00000579716 BMP7P18075 431 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 IL10P22301 178 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 TNFSF4P23510 183 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 CHMP24386 653 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 LONP1P36776 959 aaKnown RBP6.94□□□□□ -1.3
COPS3-216ENST00000579716 CRKP46108 304 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 PRIM2P49643 509 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 SCNN1BP51168 640 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 GALK1P51570 392 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 MAPK10P53779 464 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 SLC12A3P55017 1021 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 YWHAHQ04917 246 aaPredicted RBP6.94□□□□□ -1.3
COPS3-216ENST00000579716 RALGDSQ12967 914 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 COASYQ13057 564 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 KLF1Q13351 362 aaPredicted RBP6.94□□□□□ -1.3
COPS3-216ENST00000579716 MPP3Q13368 585 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 DHX34Q14147 1143 aaKnown RBP6.94□□□□□ -1.3
COPS3-216ENST00000579716 NR0B2Q15466 257 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 SMUG1Q53HV7 270 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 FOXB2Q5VYV0 432 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 MRM1Q6IN84 353 aaKnown RBP6.94□□□□□ -1.3
COPS3-216ENST00000579716 PGM2L1Q6PCE3 622 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 APOA5Q6Q788 366 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 MRPL10Q7Z7H8 261 aaKnown RBP6.94□□□□□ -1.3
COPS3-216ENST00000579716 ADCK1Q86TW2 530 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 TSPYL5Q86VY4 417 aaPredicted RBP6.94□□□□□ -1.3
COPS3-216ENST00000579716 CEP57Q86XR8 500 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 PALM2Q8IXS6 379 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 MARCH10Q8NA82 808 aaPredicted RBP6.94□□□□□ -1.3
COPS3-216ENST00000579716 DTWD2Q8NBA8 298 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 CEP70Q8NHQ1 597 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 SDCCAG3Q96C92 435 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 SGF29Q96ES7 293 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 RRP36Q96EU6 259 aaKnown RBP6.94□□□□□ -1.3
COPS3-216ENST00000579716 AK8Q96MA6 479 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 PSKH2Q96QS6 385 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 RUFY1Q96T51 708 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 ATP6V0BQ99437 205 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 COQ7Q99807 217 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 SPXQ9BT56 116 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 EPN3Q9H201 632 aa6.94□□□□□ -1.3
COPS3-216ENST00000579716 HPS4Q9NQG7 708 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms