RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 ARL5CA6NH57 179 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 H0YCG3 227 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 PDXKO00764 312 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 HNRNPDLO14979 420 aaKnown RBP4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 OGTO15294 1046 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 AKAP3O75969 853 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 MBD3O95983 291 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 AMHP03971 560 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 ITGB1P05556 798 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 KRT18P05783 430 aaKnown RBP4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 CA3P07451 260 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 GLI1P08151 1106 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 STAG3L1P0CL83 205 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 CXCL8P10145 99 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 KCNE1P15382 129 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 AKAP5P24588 427 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 DNAJB1P25685 340 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 ABCD1P33897 745 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 MLH1P40692 756 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 AARSP49588 968 aaKnown RBP eCLIP4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 SCNN1GP51170 649 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 KRTAP10-2P60368 255 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 ERVK-21P61565 698 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 SNRPFP62306 86 aaKnown RBP4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 POU5F1Q01860 360 aaKnown RBP4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 MYBPC2Q14324 1141 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 NCAPHQ15003 741 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 CAMK4Q16566 473 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 TPRNQ4KMQ1 711 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 ANKRD40Q6AI12 368 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 TWF2Q6IBS0 349 aaKnown RBP4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 DPY19L2P1Q6NXN4 242 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 C11orf57Q6ZUT1 292 aaPredicted RBP4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 APTXQ7Z2E3 356 aaKnown RBP4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 CBWD2Q8IUF1 395 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 BRSK2Q8IWQ3 736 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 NELFCDQ8IXH7 590 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 COLGALT2Q8IYK4 626 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 MYOCDQ8IZQ8 938 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 SLC39A11Q8N1S5 342 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 HELQQ8TDG4 1101 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 SMARCE1Q969G3 411 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 SAAL1Q96ER3 474 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 MYO19Q96H55 970 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 SCLT1Q96NL6 688 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 GUCD1Q96NT3 240 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 ACCSQ96QU6 501 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 GAD1Q99259 594 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 RAD9AQ99638 391 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 C17orf80Q9BSJ5 609 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 TMEM117Q9H0C3 514 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 GBP3Q9H0R5 595 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 NUP62CLQ9H1M0 184 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 NKX2-4Q9H2Z4 354 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 ZHX3Q9H4I2 956 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 ZCCHC4Q9H5U6 513 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 NRDE2Q9H7Z3 1164 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 TMEM206Q9H813 350 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 RSAD1Q9HA92 442 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 TYW1Q9NV66 732 aaKnown RBP4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 EXOC1Q9NV70 894 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 SNTG2Q9NY99 539 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 HSPBP1Q9NZL4 362 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 ANKFY1Q9P2R3 1169 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 DNAJB4Q9UDY4 337 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 KCNG1Q9UIX4 513 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 MAPK8IP1Q9UQF2 711 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 GIT1Q9Y2X7 761 aa4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 TCF20Q9UGU0 1960 aaKnown RBP4.12□□□□□ -1.75
SMARCE1-215ENST00000578995 MIA3Q5JRA6 1907 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 MYO10Q9HD67 2058 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 XIRP2A4UGR9 3374 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 TMEM265A0A087WTH1 108 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 SMIM28A0A1B0GU29 152 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 ANO9A1A5B4 782 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 GOLGA8IPA6NC78 632 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 GOLGA6L4A6NEF3 574 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 GOLGA8JA6NMD2 632 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 LACTBL1A8MY62 500 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 TMEM189-UBE2V1I3L0A0 370 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 PPEF2O14830 753 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 CLIC2O15247 247 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 MAPK13O15264 365 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 CLDN3O15551 220 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 EXTL3O43909 919 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 NUAK1O60285 661 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 LRRN2O75325 713 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 NR3C1P04150 777 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 GALTP07902 379 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 CLTAP09496 248 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 ITGA4P13612 1032 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 ZSCAN20P17040 1043 aaPredicted RBP4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 POU3F3P20264 500 aaPredicted RBP4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 CCNE1P24864 410 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 LRPAP1P30533 357 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 CD96P40200 585 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 PBX3P40426 434 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 KCNJ6P48051 423 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 SLC11A1P49279 550 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 ACOT2P49753 483 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms