RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 MARCKSL1P49006 195 aa21.4■■□□□ 1.02
SMG8-203ENST00000578922 MAMLD1Q13495 774 aa21.4■■□□□ 1.02
SMG8-203ENST00000578922 SV2CQ496J9 727 aa21.4■■□□□ 1.02
SMG8-203ENST00000578922 IFT81Q8WYA0 676 aa21.4■■□□□ 1.02
SMG8-203ENST00000578922 KRT35Q92764 455 aa21.4■■□□□ 1.02
SMG8-203ENST00000578922 RSAD1Q9HA92 442 aa21.4■■□□□ 1.02
SMG8-203ENST00000578922 O00370 1275 aa21.39■■□□□ 1.01
SMG8-203ENST00000578922 PQBP1O60828 265 aaKnown RBP21.39■■□□□ 1.01
SMG8-203ENST00000578922 RAB27AP51159 221 aa21.39■■□□□ 1.01
SMG8-203ENST00000578922 CLCNKBP51801 687 aa21.39■■□□□ 1.01
SMG8-203ENST00000578922 CDR1P51861 262 aa21.39■■□□□ 1.01
SMG8-203ENST00000578922 GNGT1P63211 74 aa21.39■■□□□ 1.01
SMG8-203ENST00000578922 CUL1Q13616 776 aa21.39■■□□□ 1.01
SMG8-203ENST00000578922 DAB2IPQ5VWQ8 1189 aa21.39■■□□□ 1.01
SMG8-203ENST00000578922 KBTBD7Q8WVZ9 684 aa21.39■■□□□ 1.01
SMG8-203ENST00000578922 CASKIN2Q8WXE0 1202 aa21.39■■□□□ 1.01
SMG8-203ENST00000578922 ARL8AQ96BM9 186 aa21.39■■□□□ 1.01
SMG8-203ENST00000578922 VCPIP1Q96JH7 1222 aa21.39■■□□□ 1.01
SMG8-203ENST00000578922 PAAF1Q9BRP4 392 aa21.39■■□□□ 1.01
SMG8-203ENST00000578922 ZNF518BQ9C0D4 1074 aa21.39■■□□□ 1.01
SMG8-203ENST00000578922 SLC38A7Q9NVC3 462 aa21.39■■□□□ 1.01
SMG8-203ENST00000578922 EBAG9O00559 213 aa21.38■■□□□ 1.01
SMG8-203ENST00000578922 ZNF623O75123 536 aa21.38■■□□□ 1.01
SMG8-203ENST00000578922 LMO2P25791 158 aa21.38■■□□□ 1.01
SMG8-203ENST00000578922 LRPAP1P30533 357 aa21.38■■□□□ 1.01
SMG8-203ENST00000578922 CDK7P50613 346 aa21.38■■□□□ 1.01
SMG8-203ENST00000578922 ZNF211Q13398 564 aaPredicted RBP21.38■■□□□ 1.01
SMG8-203ENST00000578922 PTPN20Q4JDL3 420 aa21.38■■□□□ 1.01
SMG8-203ENST00000578922 RTN4RL1Q86UN2 441 aaPredicted RBP21.38■■□□□ 1.01
SMG8-203ENST00000578922 FAM126BQ8IXS8 530 aa21.38■■□□□ 1.01
SMG8-203ENST00000578922 TTC39CQ8N584 583 aa21.38■■□□□ 1.01
SMG8-203ENST00000578922 APPL2Q8NEU8 664 aa21.38■■□□□ 1.01
SMG8-203ENST00000578922 TSPAN16Q9UKR8 245 aa21.38■■□□□ 1.01
SMG8-203ENST00000578922 CALB1P05937 261 aa21.38■■□□□ 1.01
SMG8-203ENST00000578922 CDH5P33151 784 aaPredicted RBP21.38■■□□□ 1.01
SMG8-203ENST00000578922 HSPA9P38646 679 aaKnown RBP21.38■■□□□ 1.01
SMG8-203ENST00000578922 CNGA2Q16280 664 aa21.38■■□□□ 1.01
SMG8-203ENST00000578922 PPP1R26Q5T8A7 1209 aaPredicted RBP21.38■■□□□ 1.01
SMG8-203ENST00000578922 DCAF12L1Q5VU92 463 aa21.38■■□□□ 1.01
SMG8-203ENST00000578922 PLEKHA7Q6IQ23 1121 aa21.38■■□□□ 1.01
SMG8-203ENST00000578922 LRRC8DQ7L1W4 858 aa21.38■■□□□ 1.01
SMG8-203ENST00000578922 PPM1EQ8WY54 764 aa21.38■■□□□ 1.01
SMG8-203ENST00000578922 ALG3Q92685 438 aa21.38■■□□□ 1.01
SMG8-203ENST00000578922 LHX5Q9H2C1 402 aa21.38■■□□□ 1.01
SMG8-203ENST00000578922 SNX25Q9H3E2 840 aa21.38■■□□□ 1.01
SMG8-203ENST00000578922 GDAP2Q9NXN4 497 aa21.38■■□□□ 1.01
SMG8-203ENST00000578922 GOLGA8SH3BPF8 625 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 CCDC188H7C350 402 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 MYO1FO00160 1098 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 PIK3R2O00459 728 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 RAD51CO43502 376 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 HUS1O60921 280 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 HSPA6P17066 643 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 GNL1P36915 607 aaPredicted RBP21.37■■□□□ 1.01
SMG8-203ENST00000578922 RPL7AP62424 266 aaKnown RBP21.37■■□□□ 1.01
SMG8-203ENST00000578922 GOLGA7BQ2TAP0 167 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 PPP1R2P3Q6NXS1 205 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 ECHDC2Q86YB7 292 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 CPXM1Q96SM3 734 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 TRAIPQ9BWF2 469 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 SYNCQ9H7C4 482 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 MRPL47Q9HD33 250 aaKnown RBP21.37■■□□□ 1.01
SMG8-203ENST00000578922 PARVAQ9NVD7 372 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 SQORQ9Y6N5 450 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 PODXLO00592 558 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 FAM153BP0C7A2 387 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 FAM153CQ494X1 144 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 DNAJC24Q6P3W2 148 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 KDM7AQ6ZMT4 941 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 ADGRF2Q8IZF7 708 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 C3orf58Q8NDZ4 430 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 BCAS4Q8TDM0 211 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 FAM153AQ9UHL3 310 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 SCINQ9Y6U3 715 aa21.37■■□□□ 1.01
SMG8-203ENST00000578922 PGRMC1O00264 195 aaKnown RBP21.36■■□□□ 1.01
SMG8-203ENST00000578922 CYB561D2O14569 222 aa21.36■■□□□ 1.01
SMG8-203ENST00000578922 SELPP16109 830 aa21.36■■□□□ 1.01
SMG8-203ENST00000578922 PAN2Q504Q3 1202 aaKnown RBP21.36■■□□□ 1.01
SMG8-203ENST00000578922 AADACL2Q6P093 401 aa21.36■■□□□ 1.01
SMG8-203ENST00000578922 LRIG3Q6UXM1 1119 aa21.36■■□□□ 1.01
SMG8-203ENST00000578922 LINC01599Q8WXQ3 324 aa21.36■■□□□ 1.01
SMG8-203ENST00000578922 PGBD4Q96DM1 585 aa21.36■■□□□ 1.01
SMG8-203ENST00000578922 MCEEQ96PE7 176 aa21.36■■□□□ 1.01
SMG8-203ENST00000578922 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.36■■□□□ 1.01
SMG8-203ENST00000578922 OGDHLQ9ULD0 1010 aa21.36■■□□□ 1.01
SMG8-203ENST00000578922 BHMG1C9JSJ3 638 aaPredicted RBP21.36■■□□□ 1.01
SMG8-203ENST00000578922 GPD2P43304 727 aa21.36■■□□□ 1.01
SMG8-203ENST00000578922 FEZF2Q8TBJ5 459 aa21.36■■□□□ 1.01
SMG8-203ENST00000578922 PIK3R5Q8WYR1 880 aa21.36■■□□□ 1.01
SMG8-203ENST00000578922 FAM124BQ9H5Z6 455 aaPredicted RBP21.36■■□□□ 1.01
SMG8-203ENST00000578922 TIMM13Q9Y5L4 95 aaPredicted RBP21.36■■□□□ 1.01
SMG8-203ENST00000578922 ESYT3A0FGR9 886 aa21.35■■□□□ 1.01
SMG8-203ENST00000578922 ZSCAN5CA6NGD5 496 aaPredicted RBP21.35■■□□□ 1.01
SMG8-203ENST00000578922 HMGB1P1B2RPK0 211 aaPredicted RBP21.35■■□□□ 1.01
SMG8-203ENST00000578922 ERBB2P04626 1255 aa21.35■■□□□ 1.01
SMG8-203ENST00000578922 WSCD1Q658N2 575 aa21.35■■□□□ 1.01
SMG8-203ENST00000578922 LCLAT1Q6UWP7 414 aa21.35■■□□□ 1.01
SMG8-203ENST00000578922 OSTM1Q86WC4 334 aa21.35■■□□□ 1.01
SMG8-203ENST00000578922 RASGEF1CQ8N431 466 aa21.35■■□□□ 1.01
SMG8-203ENST00000578922 UBL4BQ8N7F7 174 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms