RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 TCEAL5Q5H9L2 206 aa12.89□□□□□ -0.35
IFT20-207ENST00000578547 C4orf50Q6ZRC1 276 aa12.89□□□□□ -0.35
IFT20-207ENST00000578547 SPATA31D4Q6ZUB0 917 aa12.89□□□□□ -0.35
IFT20-207ENST00000578547 NOP9Q86U38 636 aaKnown RBP12.89□□□□□ -0.35
IFT20-207ENST00000578547 FAM35AQ86V20 835 aa12.89□□□□□ -0.35
IFT20-207ENST00000578547 MYCBPAPQ8TBZ2 947 aa12.89□□□□□ -0.35
IFT20-207ENST00000578547 SLC20A1Q8WUM9 679 aa12.89□□□□□ -0.35
IFT20-207ENST00000578547 TFAP2BQ92481 460 aa12.89□□□□□ -0.35
IFT20-207ENST00000578547 CYFIP2Q96F07 1278 aa12.89□□□□□ -0.35
IFT20-207ENST00000578547 PCED1BQ96HM7 432 aa12.89□□□□□ -0.35
IFT20-207ENST00000578547 B3GNT5Q9BYG0 378 aa12.89□□□□□ -0.35
IFT20-207ENST00000578547 NUCKS1Q9H1E3 243 aaKnown RBP12.89□□□□□ -0.35
IFT20-207ENST00000578547 NSUN3Q9H649 340 aaKnown RBP12.89□□□□□ -0.35
IFT20-207ENST00000578547 TLE6Q9H808 572 aa12.89□□□□□ -0.35
IFT20-207ENST00000578547 ABHD10Q9NUJ1 306 aa12.89□□□□□ -0.35
IFT20-207ENST00000578547 PCDHB5Q9Y5E4 795 aa12.89□□□□□ -0.35
IFT20-207ENST00000578547 ATP8B3O60423 1300 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 FAM170AA1A519 330 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 MTMR11A4FU01 709 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 M0QYV0 167 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 MED7O43513 233 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 CCDC172P0C7W6 258 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 SKILP12757 684 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 FOSL2P15408 326 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 CYP11B1P15538 503 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 ADCY1Q08828 1119 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 KLHL30Q0D2K2 578 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 GPR17Q13304 367 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 RAB33AQ14088 237 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 NFE2Q16621 373 aaPredicted RBP12.88□□□□□ -0.35
IFT20-207ENST00000578547 TDRD12Q587J7 1177 aaKnown RBP12.88□□□□□ -0.35
IFT20-207ENST00000578547 PPP1R26Q5T8A7 1209 aaPredicted RBP12.88□□□□□ -0.35
IFT20-207ENST00000578547 LLGL2Q6P1M3 1020 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 FAM171BQ6P995 826 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 PASD1Q8IV76 773 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 FMNL3Q8IVF7 1028 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 FUKQ8N0W3 1084 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 MICALL1Q8N3F8 863 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 TTC9BQ8N6N2 239 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 ATAD1Q8NBU5 361 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 OR8K1Q8NGG5 319 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 EPS8L1Q8TE68 723 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 DNAJC7Q99615 494 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 SEPT5Q99719 369 aaPredicted RBP12.88□□□□□ -0.35
IFT20-207ENST00000578547 ZSWIM1Q9BR11 485 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 ZNF518BQ9C0D4 1074 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 PDCL3Q9H2J4 239 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 IGFLR1Q9H665 355 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 KRT82Q9NSB4 513 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 SEPT11Q9NVA2 429 aaKnown RBP12.88□□□□□ -0.35
IFT20-207ENST00000578547 ZNHIT6Q9NWK9 470 aaKnown RBP12.88□□□□□ -0.35
IFT20-207ENST00000578547 IMPACTQ9P2X3 320 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 KIAA1257Q9ULG3 409 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 SLC27A5Q9Y2P5 690 aa12.88□□□□□ -0.35
IFT20-207ENST00000578547 PLXNA3P51805 1871 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 O00370 1275 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 PRRG1O14668 218 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 TGM5O43548 720 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 AP1G2O75843 785 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 SOAT2O75908 522 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 VNN2O95498 520 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 GLUD1P00367 558 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 CFHP08603 1231 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 BDNFP23560 247 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 CYP2F1P24903 491 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 ELF1P32519 619 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 HYAL1Q12794 435 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 DUSP4Q13115 394 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 ARID5BQ14865 1188 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 DUSP6Q16828 381 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 MGAT5BQ3V5L5 792 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 TPGS2Q68CL5 300 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 ARHGAP17Q68EM7 881 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 IRF2BP2Q7Z5L9 587 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 TC2NQ8N9U0 490 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 ZNF461Q8TAF7 563 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 SLC22A17Q8WUG5 538 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 ZNF606Q8WXB4 792 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 SYN2Q92777 582 aaPredicted RBP12.87□□□□□ -0.35
IFT20-207ENST00000578547 PPP2R3CQ969Q6 453 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 HNRNPABQ99729 332 aaKnown RBP12.87□□□□□ -0.35
IFT20-207ENST00000578547 CYP4F11Q9HBI6 524 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 AIPL1Q9NZN9 384 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 HESX1Q9UBX0 185 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 AFF4Q9UHB7 1163 aaKnown RBP12.87□□□□□ -0.35
IFT20-207ENST00000578547 NOCTQ9UK39 431 aaKnown RBP12.87□□□□□ -0.35
IFT20-207ENST00000578547 TSPAN16Q9UKR8 245 aa12.87□□□□□ -0.35
IFT20-207ENST00000578547 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.87□□□□□ -0.35
IFT20-207ENST00000578547 SPDYE4A6NLX3 237 aa12.86□□□□□ -0.35
IFT20-207ENST00000578547 MICAL2O94851 1124 aa12.86□□□□□ -0.35
IFT20-207ENST00000578547 ABLIM3O94929 683 aa12.86□□□□□ -0.35
IFT20-207ENST00000578547 SEC24AO95486 1093 aa12.86□□□□□ -0.35
IFT20-207ENST00000578547 SERPING1P05155 500 aa12.86□□□□□ -0.35
IFT20-207ENST00000578547 PTMAP06454 111 aaKnown RBP12.86□□□□□ -0.35
IFT20-207ENST00000578547 MMEP08473 750 aa12.86□□□□□ -0.35
IFT20-207ENST00000578547 FAM200BP0CF97 657 aa12.86□□□□□ -0.35
IFT20-207ENST00000578547 EPCAMP16422 314 aa12.86□□□□□ -0.35
IFT20-207ENST00000578547 CLCN4P51793 760 aa12.86□□□□□ -0.35
IFT20-207ENST00000578547 CACNA2D1P54289 1103 aa12.86□□□□□ -0.35
IFT20-207ENST00000578547 RBM10P98175 930 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms