RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 TMEM132DQ14C87 1099 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 MORF4L2Q15014 288 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ACAP1Q15027 740 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 CCDC142Q17RM4 750 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 SLC10A6Q3KNW5 377 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 LACTB2Q53H82 288 aaPredicted RBP9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 RNASEH2BQ5TBB1 312 aaKnown RBP9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 MTHFD1LQ6UB35 978 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 MAMDC4Q6UXC1 1216 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ZNF467Q7Z7K2 595 aaPredicted RBP9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 PRUNE1Q86TP1 453 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 AFG1LQ8WV93 481 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ACSF2Q96CM8 615 aaPredicted RBP9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 HAUS1Q96CS2 278 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 CPB2Q96IY4 423 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 C9orf72Q96LT7 481 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 TWNKQ96RR1 684 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 CPXM1Q96SM3 734 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 RBM15Q96T37 977 aaKnown RBP eCLIP9.83□□□□□ -0.846e-8■□□□□ 10.7
CDK5RAP3-208ENST00000578525 PRMT1Q99873 361 aaKnown RBP9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 PHACTR1Q9C0D0 580 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 MIS12Q9H081 205 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 SYNCQ9H7C4 482 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ZWILCHQ9H900 591 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 SAMD15Q9P1V8 674 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 TJP2Q9UDY2 1190 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 HMGXB4Q9UGU5 601 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ITGA11Q9UKX5 1188 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 AGAP1Q9UPQ3 857 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 SLC45A1Q9Y2W3 748 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 C2CD2Q9Y426 696 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ACTL7BQ9Y614 415 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 CAPN7Q9Y6W3 813 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 MGAMO43451 1857 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 PLXNA1Q9UIW2 1896 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 MCM3APO60318 1980 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 TMEM120BA0PK00 339 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 TSPAN1O60635 241 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 TRUB2O95900 331 aaKnown RBP9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 VTNP04004 478 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ZSCAN5DPP0CG00 497 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 CYP2C8P10632 490 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 CETPP11597 493 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ETS1P14921 441 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 PECAM1P16284 738 aaPredicted RBP9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 IL1R2P27930 398 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ADORA2AP29274 412 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 RDXP35241 583 aaKnown RBP9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 GRM5P41594 1212 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 OTUD4Q01804 1114 aaKnown RBP9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 INCA1Q0VD86 236 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 NR1H3Q13133 447 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ORC1Q13415 861 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 STILQ15468 1287 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 DCAF4L1Q3SXM0 396 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 GJC2Q5T442 439 aaPredicted RBP9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 CYP4F22Q6NT55 531 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 CENPUQ71F23 418 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ILDR2Q71H61 639 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 APBB1IPQ7Z5R6 666 aaPredicted RBP9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 PIGWQ7Z7B1 504 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 PCGF5Q86SE9 256 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ZNF410Q86VK4 478 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 TAX1BP1Q86VP1 789 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 PACS2Q86VP3 889 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 TDRPQ86YL5 185 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 RFX6Q8HWS3 928 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 CCDC13Q8IYE1 715 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 CNPY4Q8N129 248 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ARFGAP1Q8N6T3 406 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 GLIS1Q8NBF1 620 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 DYDC1Q8WWB3 177 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 PRCCQ92733 491 aaPredicted RBP9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 SLC10A4Q96EP9 437 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 HPDLQ96IR7 371 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ACAP3Q96P50 834 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 PPP1R16BQ96T49 567 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ADPGKQ9BRR6 497 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 KATNBL1Q9H079 304 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 PPCSQ9HAB8 311 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 SPON1Q9HCB6 807 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ASNSD1Q9NWL6 643 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 EURLQ9NYK6 297 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 CTNNAL1Q9UBT7 734 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 MORF4L1Q9UBU8 362 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 KIAA1257Q9ULG3 409 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 BARX2Q9UMQ3 279 aaPredicted RBP9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 NAALADL1Q9UQQ1 740 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 RALGAPA2Q2PPJ7 1873 aa9.82□□□□□ -0.84
CDK5RAP3-208ENST00000578525 UNCXA6NJT0 531 aa9.81□□□□□ -0.84
CDK5RAP3-208ENST00000578525 CCT8L1PA6NM43 557 aa9.81□□□□□ -0.84
CDK5RAP3-208ENST00000578525 SGK1O00141 431 aa9.81□□□□□ -0.84
CDK5RAP3-208ENST00000578525 SMAPO00193 183 aa9.81□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ALOX15BO15296 676 aa9.81□□□□□ -0.84
CDK5RAP3-208ENST00000578525 CST8O60676 142 aa9.81□□□□□ -0.84
CDK5RAP3-208ENST00000578525 RNF8O76064 485 aa9.81□□□□□ -0.84
CDK5RAP3-208ENST00000578525 VIMP08670 466 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ZNF286BP0CG31 522 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms