RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 DMAC2Q9NW81 257 aa4.79□□□□□ -1.64
PPP4R1-209ENST00000578329 ABI2Q9NYB9 513 aaPredicted RBP4.79□□□□□ -1.64
PPP4R1-209ENST00000578329 ASB3Q9Y575 518 aa4.79□□□□□ -1.64
PPP4R1-209ENST00000578329 WNT6Q9Y6F9 365 aa4.79□□□□□ -1.64
PPP4R1-209ENST00000578329 MYO18AQ92614 2054 aaKnown RBP4.79□□□□□ -1.64
PPP4R1-209ENST00000578329 H0YCG3 227 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 K7EQS6 105 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 CLDN5O00501 218 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 MAN2B1O00754 1011 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 TNFRSF10BO14763 440 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 TRIM24O15164 1050 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 ACTN4O43707 911 aaKnown RBP4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 TBCAO75347 108 aaKnown RBP4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 BEST1O76090 585 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 GCNT3O95395 438 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 OAS1P00973 400 aaKnown RBP4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 SCP2P22307 547 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 MATR3P43243 847 aaKnown RBP eCLIP4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 MAGEA9P43362 315 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 ALDH1A3P47895 512 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 CXCL12P48061 93 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 MCM2P49736 904 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 MCCD1P59942 119 aaPredicted RBP4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 DLG4P78352 724 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 CLDN10P78369 228 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 CUL4BQ13620 913 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 RUNX3Q13761 415 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 ZNF268Q14587 947 aaPredicted RBP4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 PUM1Q14671 1186 aaKnown RBP eCLIP4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 SF3A2Q15428 464 aaKnown RBP4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 KYAT1Q16773 422 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 BMT2Q1RMZ1 405 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 CFAP221Q4G0U5 840 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 ARHGAP29Q52LW3 1261 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 RRAGBQ5VZM2 374 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 HEATR6Q6AI08 1181 aaKnown RBP4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 SLFN12LQ6IEE8 588 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 IQCEQ6IPM2 695 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 TCEAL6Q6IPX3 200 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 TMEM92Q6UXU6 159 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 TRAPPC11Q7Z392 1133 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 USP37Q86T82 979 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 WDR5BQ86VZ2 330 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 ADGRF2Q8IZF7 708 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 CSGALNACT2Q8N6G5 542 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 CELF5Q8N6W0 485 aaKnown RBP4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 LRRC52Q8N7C0 313 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 ARL14EPQ8N8R7 260 aaPredicted RBP4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 SPPL2BQ8TCT7 592 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 KCNG4Q8TDN1 519 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 TCEAL3Q969E4 200 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 MYLPFQ96A32 169 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 PCED1BQ96HM7 432 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 INTS4Q96HW7 963 aaKnown RBP4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 CDK5RAP3Q96JB5 506 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 ACCSQ96QU6 501 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 TWNKQ96RR1 684 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 C7orf25Q9BPX7 421 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 TMEM121BQ9BXQ6 578 aaPredicted RBP4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 B3GNT5Q9BYG0 378 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 ZNF518BQ9C0D4 1074 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 GPR88Q9GZN0 384 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 DUSP15Q9H1R2 295 aaPredicted RBP4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 BLZF1Q9H2G9 400 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 KCTD10Q9H3F6 313 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 ECT2Q9H8V3 914 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 MRPL44Q9H9J2 332 aaKnown RBP4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 ABCB6Q9NP58 842 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 ZDHHC4Q9NPG8 344 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 AGPAT3Q9NRZ7 376 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 SEMA4GQ9NTN9 838 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 TDP1Q9NUW8 608 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 PANK4Q9NVE7 773 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 OSER1Q9NX31 292 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 DDX43Q9NXZ2 648 aaKnown RBP4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 RBAKQ9NYW8 714 aaPredicted RBP4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 IL37Q9NZH6 218 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 HSPBP1Q9NZL4 362 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 SEL1LQ9UBV2 794 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 HMGXB4Q9UGU5 601 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 KCNG1Q9UIX4 513 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 PCDHA7Q9UN72 937 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 SNX9Q9Y5X1 595 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 RALGAPA1Q6GYQ0 2036 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 ITPR1Q14643 2758 aa4.78□□□□□ -1.64
PPP4R1-209ENST00000578329 ASCC3Q8N3C0 2202 aaKnown RBP4.77□□□□□ -1.65
PPP4R1-209ENST00000578329 NUP205Q92621 2012 aa4.77□□□□□ -1.65
PPP4R1-209ENST00000578329 DMXL2Q8TDJ6 3036 aa4.77□□□□□ -1.65
PPP4R1-209ENST00000578329 PCDH15Q96QU1 1955 aa4.77□□□□□ -1.65
PPP4R1-209ENST00000578329 PKD1L2Q7Z442 2459 aa4.77□□□□□ -1.65
PPP4R1-209ENST00000578329 FAM92AA1XBS5 289 aa4.77□□□□□ -1.65
PPP4R1-209ENST00000578329 ZNF840PA6NDX5 716 aa4.77□□□□□ -1.65
PPP4R1-209ENST00000578329 HHLA1C9JL84 531 aa4.77□□□□□ -1.65
PPP4R1-209ENST00000578329 SLC30A4O14863 429 aa4.77□□□□□ -1.65
PPP4R1-209ENST00000578329 CLIC2O15247 247 aa4.77□□□□□ -1.65
PPP4R1-209ENST00000578329 STX6O43752 255 aa4.77□□□□□ -1.65
PPP4R1-209ENST00000578329 ADAM23O75077 832 aa4.77□□□□□ -1.65
PPP4R1-209ENST00000578329 RNF40O75150 1001 aa4.77□□□□□ -1.65
PPP4R1-209ENST00000578329 PRPF40AO75400 957 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms