RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 NFE2Q16621 373 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 MEA1Q16626 185 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 PTPROQ16827 1216 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 INTS6LQ5JSJ4 861 aaKnown RBP11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 SLC8B1Q6J4K2 584 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 ZNF677Q86XU0 584 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 SLC4A11Q8NBS3 891 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 SPC24Q8NBT2 197 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 B3GALNT2Q8NCR0 500 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 WHAMMQ8TF30 809 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 TCF25Q9BQ70 676 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 RTP3Q9BQQ7 232 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 EMILIN2Q9BXX0 1053 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 PRKD2Q9BZL6 878 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 ELOVL4Q9GZR5 314 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 ZCWPW1Q9H0M4 648 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 RXFP1Q9HBX9 757 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 ABHD10Q9NUJ1 306 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 HMGXB4Q9UGU5 601 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 BZW2Q9Y6E2 419 aaKnown RBP11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 CHD9Q3L8U1 2897 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 TRIOBPQ9H2D6 2365 aa11.9□□□□□ -0.51
TRAPPC8-204ENST00000578252 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 FSCN2O14926 492 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 GRM6O15303 877 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 CYP26A1O43174 497 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 LILRB3O75022 631 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 CXCL14O95715 111 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 C1RP00736 705 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 SERPING1P05155 500 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 CPB1P15086 417 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 CD19P15391 556 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 LMO2P25791 158 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 PRKCIP41743 596 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 CCDC173Q0VFZ6 552 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 ZNF394Q53GI3 561 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 SGO2Q562F6 1265 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 ARHGAP17Q68EM7 881 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 PRSS55Q6UWB4 352 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 C4orf50Q6ZRC1 276 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 SPRED2Q7Z698 418 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 ACOT1Q86TX2 421 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 OR10T2Q8NGX3 314 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 MYCBPAPQ8TBZ2 947 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 C2orf15Q8WU43 125 aaKnown RBP11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 PDLIM2Q96JY6 352 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 B3GALT6Q96L58 329 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 HEXIM2Q96MH2 286 aaKnown RBP11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 PANX2Q96RD6 677 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 TWNKQ96RR1 684 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 ZNF576Q9H609 170 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 MAFFQ9ULX9 164 aa11.89□□□□□ -0.51
TRAPPC8-204ENST00000578252 RNF225M0QZC1 329 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 C2CD2LO14523 706 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 THAP12O43422 761 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 ADH1AP07327 375 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 PNMA6AP0CW24 399 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 CYP11B1P15538 503 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 ACAT1P24752 427 aaKnown RBP11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 ANXA13P27216 316 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 CA8P35219 290 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 CLCN1P35523 988 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 ADKP55263 362 aaKnown RBP11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 ERVFC1P60507 584 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 CDK17Q00537 523 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 KLHL30Q0D2K2 578 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 GPR17Q13304 367 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 CNGA2Q16280 664 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 PUS10Q3MIT2 529 aaKnown RBP11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 PLPP4Q5VZY2 271 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 TPGS2Q68CL5 300 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 FAM171BQ6P995 826 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 IRF2BP2Q7Z5L9 587 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 VPS36Q86VN1 386 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 MRPL43Q8N983 215 aaKnown RBP11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 TC2NQ8N9U0 490 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 SPPL2BQ8TCT7 592 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 MICAL1Q8TDZ2 1067 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 EPS8L1Q8TE68 723 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 GDPD5Q8WTR4 605 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 PPP2R3CQ969Q6 453 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 FUBP3Q96I24 572 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 PKMYT1Q99640 499 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 CLSTN3Q9BQT9 956 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 DPEP3Q9H4B8 488 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 CERS4Q9HA82 394 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 ABCB6Q9NP58 842 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 HESX1Q9UBX0 185 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 NME7Q9Y5B8 376 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 CDY1Q9Y6F8 540 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 PTPRDP23468 1912 aa11.88□□□□□ -0.51
TRAPPC8-204ENST00000578252 C2orf71A6NGG8 1288 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 NRDCO43847 1150 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 DNAJB1P25685 340 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 OR1D2P34982 312 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 SLC8A3P57103 927 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 PSMC1P62191 440 aaKnown RBP11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 CDR2Q01850 454 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 ARID5AQ03989 594 aa11.87□□□□□ -0.51
TRAPPC8-204ENST00000578252 ORC1Q13415 861 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms