RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 TMLHEQ9NVH6 421 aa13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 RBAKQ9NYW8 714 aaPredicted RBP13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 ITGA11Q9UKX5 1188 aa13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 L1RE1Q9UN81 338 aa13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 ATP6V1DQ9Y5K8 247 aa13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 TRDMT1O14717 391 aaKnown RBP13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 EXTL3O43909 919 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 PPP6R2O75170 966 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 CCDC192P0DO97 292 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 IDEP14735 1019 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 STAT6P42226 847 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 ME1P48163 572 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 CASP5P51878 434 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 AMPD2Q01433 879 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 MYL7Q01449 175 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 BFSP1Q12934 665 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 RUNX3Q13761 415 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 TMEM196Q5HYL7 178 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 PPM1JQ5JR12 505 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 TXNDC8Q6A555 127 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 ATL3Q6DD88 541 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 IL31Q6EBC2 164 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 CC2D1AQ6P1N0 951 aaPredicted RBP13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 TRMT2BQ96GJ1 504 aaKnown RBP13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 SPATA32Q96LK8 384 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 MYRFLQ96LU7 910 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 PKMYT1Q99640 499 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 PANK2Q9BZ23 570 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 TMEM206Q9H813 350 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 PANK4Q9NVE7 773 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 C2orf42Q9NWW7 574 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 DDX43Q9NXZ2 648 aaKnown RBP13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 UXTQ9UBK9 157 aaPredicted RBP13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 SLC8A2Q9UPR5 921 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 CCL26Q9Y258 94 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 SPAG17Q6Q759 2223 aa13.49□□□□□ -0.25
SMARCD2-207ENST00000578234 CCDC163A0A0D9SF12 145 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 OTOL1A6NHN0 477 aaPredicted RBP13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 GABRDO14764 452 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 KIAA0391O15091 583 aaKnown RBP13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 GDF9O60383 454 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 FOXD2O60548 495 aaPredicted RBP13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 CUTAO60888 179 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 KRT37O76014 449 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 CYP2F1P24903 491 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 HOXC13P31276 330 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 LHX1P48742 406 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 GPR15P49685 360 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 RBP5P82980 135 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 GRSF1Q12849 480 aaKnown RBP eCLIP13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 PSMD2Q13200 908 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 ZNF268Q14587 947 aaPredicted RBP13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 CSRP2Q16527 193 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 DDR2Q16832 855 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 CFAP221Q4G0U5 840 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 INTS6LQ5JSJ4 861 aaKnown RBP13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 DPH6Q7L8W6 267 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 WDR5BQ86VZ2 330 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 TOP6BLQ8N6T0 577 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 C12orf50Q8NA57 414 aaPredicted RBP13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 NETO1Q8TDF5 533 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 CBWD1Q9BRT8 395 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 PDE11AQ9HCR9 933 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 HPS4Q9NQG7 708 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 RCOR1Q9UKL0 485 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 GTF3C4Q9UKN8 822 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 PCDHA7Q9UN72 937 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 SNX9Q9Y5X1 595 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 OBSL1O75147 1896 aa13.48□□□□□ -0.25
SMARCD2-207ENST00000578234 A0A087X0B3 334 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 GOLGA8IPA6NC78 632 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 GOLGA8JA6NMD2 632 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 ATG13O75143 517 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 NOL4O94818 638 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 TMEM191BP0C7N4 346 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 ACAT1P24752 427 aaKnown RBP13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 PCSK1P29120 753 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 PDGFRLQ15198 375 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 SOWAHAQ2M3V2 549 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 SCARA3Q6AZY7 606 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 FSTL4Q6MZW2 842 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 PRR23CQ6ZRP0 262 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 CCDC65Q8IXS2 484 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 GPD1LQ8N335 351 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 FAM160A2Q8N612 972 aaPredicted RBP13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 PDILTQ8N807 584 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 STKLD1Q8NE28 680 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 CHFRQ96EP1 664 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 FUBP3Q96I24 572 aaKnown RBP eCLIP13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 IPO9Q96P70 1041 aaKnown RBP13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 FGFBP2Q9BYJ0 223 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 ARRDC1-AS1Q9H2J1 176 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 EBF3Q9H4W6 596 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 PCIF1Q9H4Z3 704 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 TRPC7Q9HCX4 862 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 CHMP5Q9NZZ3 219 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 SIX4Q9UIU6 781 aa13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 CIZ1Q9ULV3 898 aaPredicted RBP13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 R3HCC1Q9Y3T6 440 aaKnown RBP13.47□□□□□ -0.25
SMARCD2-207ENST00000578234 SLC30A4O14863 429 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms