RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 LIMS2Q7Z4I7 341 aa17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 MAB21L3Q8N8X9 362 aa17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 IQUBQ8NA54 791 aa17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 KBTBD7Q8WVZ9 684 aa17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 USP13Q92995 863 aaPredicted RBP17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 TRMT2BQ96GJ1 504 aaKnown RBP17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 FAM83CQ9BQN1 747 aa17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 THG1LQ9NWX6 298 aaKnown RBP17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 MAGED2Q9UNF1 606 aaPredicted RBP17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 HELZP42694 1942 aaKnown RBP17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 UBE4BO95155 1302 aa17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 SOBPA7XYQ1 873 aa17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 PAPSS2O95340 614 aaPredicted RBP17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 EHHADHQ08426 723 aa17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 MYO1EQ12965 1108 aa17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 CCINQ13939 588 aa17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 PON2Q15165 354 aa17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 DUOXA2Q1HG44 320 aa17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 ITPRIPL2Q3MIP1 535 aa17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 FOXD4L5Q5VV16 416 aaPredicted RBP17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 MON1AQ86VX9 555 aa17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 WDR49Q8IV35 697 aa17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 RIN3Q8TB24 985 aa17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 ZNF507Q8TCN5 953 aa17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 FOXD4L4Q8WXT5 416 aaPredicted RBP17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 MRPS31Q92665 395 aaKnown RBP17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 FUBP3Q96I24 572 aaKnown RBP eCLIP17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 HPDLQ96IR7 371 aa17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 MYRFLQ96LU7 910 aa17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 C7orf25Q9BPX7 421 aa17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 KIF9Q9HAQ2 790 aa17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 MAGEF1Q9HAY2 307 aa17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 KIAA1586Q9HCI6 787 aa17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 HPS4Q9NQG7 708 aa17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 AGPAT3Q9NRZ7 376 aa17.84■□□□□ 0.45
CDK5RAP3-206ENST00000578018 TGFB1I1O43294 461 aa17.83■□□□□ 0.44
CDK5RAP3-206ENST00000578018 SNRNP35Q16560 246 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-206ENST00000578018 FAM171BQ6P995 826 aa17.83■□□□□ 0.44
CDK5RAP3-206ENST00000578018 UNC13DQ70J99 1090 aa17.83■□□□□ 0.44
CDK5RAP3-206ENST00000578018 DPH6Q7L8W6 267 aa17.83■□□□□ 0.44
CDK5RAP3-206ENST00000578018 SPATA2LQ8IUW3 424 aaPredicted RBP17.83■□□□□ 0.44
CDK5RAP3-206ENST00000578018 SYT15Q9BQS2 421 aa17.83■□□□□ 0.44
CDK5RAP3-206ENST00000578018 GKN1Q9NS71 199 aa17.83■□□□□ 0.44
CDK5RAP3-206ENST00000578018 TDP1Q9NUW8 608 aa17.83■□□□□ 0.44
CDK5RAP3-206ENST00000578018 C2orf42Q9NWW7 574 aa17.83■□□□□ 0.44
CDK5RAP3-206ENST00000578018 UXTQ9UBK9 157 aaPredicted RBP17.83■□□□□ 0.44
CDK5RAP3-206ENST00000578018 R3HCC1Q9Y3T6 440 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-206ENST00000578018 ATG2BQ96BY7 2078 aa17.83■□□□□ 0.44
CDK5RAP3-206ENST00000578018 K7ESF4 209 aa17.82■□□□□ 0.44
CDK5RAP3-206ENST00000578018 F13A1P00488 732 aa17.82■□□□□ 0.44
CDK5RAP3-206ENST00000578018 ZSCAN22P10073 491 aaPredicted RBP17.82■□□□□ 0.44
CDK5RAP3-206ENST00000578018 CASP1P29466 404 aa17.82■□□□□ 0.44
CDK5RAP3-206ENST00000578018 PSMC1P62191 440 aaKnown RBP17.82■□□□□ 0.44
CDK5RAP3-206ENST00000578018 DMWDQ09019 674 aa17.82■□□□□ 0.44
CDK5RAP3-206ENST00000578018 ZNF268Q14587 947 aaPredicted RBP17.82■□□□□ 0.44
CDK5RAP3-206ENST00000578018 TRIM68Q6AZZ1 485 aa17.82■□□□□ 0.44
CDK5RAP3-206ENST00000578018 SCFD1Q8WVM8 642 aa17.82■□□□□ 0.44
CDK5RAP3-206ENST00000578018 SECISBP2LQ93073 1101 aaKnown RBP17.82■□□□□ 0.44
CDK5RAP3-206ENST00000578018 CHFRQ96EP1 664 aa17.82■□□□□ 0.44
CDK5RAP3-206ENST00000578018 CRTAC1Q9NQ79 661 aa17.82■□□□□ 0.44
CDK5RAP3-206ENST00000578018 CDH9Q9ULB4 789 aa17.82■□□□□ 0.44
CDK5RAP3-206ENST00000578018 SPAG17Q6Q759 2223 aa17.82■□□□□ 0.44
CDK5RAP3-206ENST00000578018 OTOL1A6NHN0 477 aaPredicted RBP17.81■□□□□ 0.44
CDK5RAP3-206ENST00000578018 POLR2DO15514 142 aaKnown RBP17.81■□□□□ 0.44
CDK5RAP3-206ENST00000578018 ATP2C2O75185 946 aa17.81■□□□□ 0.44
CDK5RAP3-206ENST00000578018 LMO2P25791 158 aa17.81■□□□□ 0.44
CDK5RAP3-206ENST00000578018 MAGEA11P43364 429 aa17.81■□□□□ 0.44
CDK5RAP3-206ENST00000578018 CYP24A1Q07973 514 aa17.81■□□□□ 0.44
CDK5RAP3-206ENST00000578018 RUNX3Q13761 415 aa17.81■□□□□ 0.44
CDK5RAP3-206ENST00000578018 PSMD6Q15008 389 aa17.81■□□□□ 0.44
CDK5RAP3-206ENST00000578018 FOXD4L6Q3SYB3 417 aaPredicted RBP17.81■□□□□ 0.44
CDK5RAP3-206ENST00000578018 FOXD4L3Q6VB84 417 aaPredicted RBP17.81■□□□□ 0.44
CDK5RAP3-206ENST00000578018 C4orf50Q6ZRC1 276 aa17.81■□□□□ 0.44
CDK5RAP3-206ENST00000578018 TRAPPC11Q7Z392 1133 aa17.81■□□□□ 0.44
CDK5RAP3-206ENST00000578018 HSCBQ8IWL3 235 aa17.81■□□□□ 0.44
CDK5RAP3-206ENST00000578018 SCN4BQ8IWT1 228 aa17.81■□□□□ 0.44
CDK5RAP3-206ENST00000578018 NELFCDQ8IXH7 590 aa17.81■□□□□ 0.44
CDK5RAP3-206ENST00000578018 SYNPOQ8N3V7 929 aa17.81■□□□□ 0.44
CDK5RAP3-206ENST00000578018 MYLPFQ96A32 169 aa17.81■□□□□ 0.44
CDK5RAP3-206ENST00000578018 CGRRF1Q99675 332 aa17.81■□□□□ 0.44
CDK5RAP3-206ENST00000578018 BLZF1Q9H2G9 400 aa17.81■□□□□ 0.44
CDK5RAP3-206ENST00000578018 EBF3Q9H4W6 596 aa17.81■□□□□ 0.44
CDK5RAP3-206ENST00000578018 DLL3Q9NYJ7 618 aa17.81■□□□□ 0.44
CDK5RAP3-206ENST00000578018 CHURC1-FNTBB4DL54 471 aa17.8■□□□□ 0.44
CDK5RAP3-206ENST00000578018 DLATP10515 647 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-206ENST00000578018 PDIA4P13667 645 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-206ENST00000578018 ARSAP15289 507 aa17.8■□□□□ 0.44
CDK5RAP3-206ENST00000578018 WARSP23381 471 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-206ENST00000578018 FNTBP49356 437 aa17.8■□□□□ 0.44
CDK5RAP3-206ENST00000578018 CYP2J2P51589 502 aa17.8■□□□□ 0.44
CDK5RAP3-206ENST00000578018 SNRPFP62306 86 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-206ENST00000578018 USP4Q13107 963 aa17.8■□□□□ 0.44
CDK5RAP3-206ENST00000578018 PUM1Q14671 1186 aaKnown RBP eCLIP17.8■□□□□ 0.44
CDK5RAP3-206ENST00000578018 MAPRE1Q15691 268 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-206ENST00000578018 BMT2Q1RMZ1 405 aa17.8■□□□□ 0.44
CDK5RAP3-206ENST00000578018 TMEM196Q5HYL7 178 aa17.8■□□□□ 0.44
CDK5RAP3-206ENST00000578018 RESP18Q5W5W9 173 aa17.8■□□□□ 0.44
CDK5RAP3-206ENST00000578018 GPR161Q8N6U8 529 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-206ENST00000578018 RDH13Q8NBN7 331 aa17.8■□□□□ 0.44
CDK5RAP3-206ENST00000578018 SLC22A12Q96S37 553 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms