RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 ING5Q8WYH8 240 aa23.67■■□□□ 1.38
SMARCD2-206ENST00000577990 TCEAL4Q96EI5 215 aa23.67■■□□□ 1.38
SMARCD2-206ENST00000577990 BCO2Q9BYV7 579 aa23.67■■□□□ 1.38
SMARCD2-206ENST00000577990 NIF3L1Q9GZT8 377 aa23.67■■□□□ 1.38
SMARCD2-206ENST00000577990 RAB20Q9NX57 234 aa23.67■■□□□ 1.38
SMARCD2-206ENST00000577990 MAGEC2Q9UBF1 373 aaPredicted RBP23.67■■□□□ 1.38
SMARCD2-206ENST00000577990 LRRN2O75325 713 aa23.66■■□□□ 1.38
SMARCD2-206ENST00000577990 MICAL2O94851 1124 aa23.66■■□□□ 1.38
SMARCD2-206ENST00000577990 PDGFBP01127 241 aaPredicted RBP23.66■■□□□ 1.38
SMARCD2-206ENST00000577990 PTPN1P18031 435 aaKnown RBP23.66■■□□□ 1.38
SMARCD2-206ENST00000577990 MTMR3Q13615 1198 aa23.66■■□□□ 1.38
SMARCD2-206ENST00000577990 DPCR1Q3MIW9 517 aa23.66■■□□□ 1.38
SMARCD2-206ENST00000577990 B3GALNT2Q8NCR0 500 aa23.66■■□□□ 1.38
SMARCD2-206ENST00000577990 GIPC2Q8TF65 315 aa23.66■■□□□ 1.38
SMARCD2-206ENST00000577990 LRRC3Q9BY71 257 aa23.66■■□□□ 1.38
SMARCD2-206ENST00000577990 KCNK12Q9HB15 430 aa23.66■■□□□ 1.38
SMARCD2-206ENST00000577990 IGSF9Q9P2J2 1179 aa23.66■■□□□ 1.38
SMARCD2-206ENST00000577990 DACH1Q9UI36 760 aa23.66■■□□□ 1.38
SMARCD2-206ENST00000577990 COQ4Q9Y3A0 265 aa23.66■■□□□ 1.38
SMARCD2-206ENST00000577990 MAGEA11P43364 429 aa23.65■■□□□ 1.38
SMARCD2-206ENST00000577990 GPR15P49685 360 aa23.65■■□□□ 1.38
SMARCD2-206ENST00000577990 MARSP56192 900 aaKnown RBP23.65■■□□□ 1.38
SMARCD2-206ENST00000577990 RPL10AP62906 217 aaKnown RBP23.65■■□□□ 1.38
SMARCD2-206ENST00000577990 CYP27A1Q02318 531 aa23.65■■□□□ 1.38
SMARCD2-206ENST00000577990 RBM43Q6ZSC3 357 aaKnown RBP23.65■■□□□ 1.38
SMARCD2-206ENST00000577990 SUGP1Q8IWZ8 645 aaKnown RBP23.65■■□□□ 1.38
SMARCD2-206ENST00000577990 FBXL6Q8N531 539 aa23.65■■□□□ 1.38
SMARCD2-206ENST00000577990 PCED1BQ96HM7 432 aa23.65■■□□□ 1.38
SMARCD2-206ENST00000577990 MED15Q96RN5 788 aa23.65■■□□□ 1.38
SMARCD2-206ENST00000577990 CYP3A43Q9HB55 503 aa23.65■■□□□ 1.38
SMARCD2-206ENST00000577990 GDE1Q9NZC3 331 aa23.65■■□□□ 1.38
SMARCD2-206ENST00000577990 PTPRDP23468 1912 aa23.65■■□□□ 1.38
SMARCD2-206ENST00000577990 MOSPD3O75425 235 aa23.64■■□□□ 1.37
SMARCD2-206ENST00000577990 CCDC192P0DO97 292 aa23.64■■□□□ 1.37
SMARCD2-206ENST00000577990 FMO5P49326 533 aa23.64■■□□□ 1.37
SMARCD2-206ENST00000577990 TAF12Q16514 161 aa23.64■■□□□ 1.37
SMARCD2-206ENST00000577990 WDR44Q5JSH3 913 aa23.64■■□□□ 1.37
SMARCD2-206ENST00000577990 IER5LQ5T953 404 aa23.64■■□□□ 1.37
SMARCD2-206ENST00000577990 TRIM59Q8IWR1 403 aa23.64■■□□□ 1.37
SMARCD2-206ENST00000577990 GPR152Q8TDT2 470 aa23.64■■□□□ 1.37
SMARCD2-206ENST00000577990 NXPE3Q969Y0 559 aa23.64■■□□□ 1.37
SMARCD2-206ENST00000577990 MCRS1Q96EZ8 462 aa23.64■■□□□ 1.37
SMARCD2-206ENST00000577990 FAXDC2Q96IV6 333 aa23.64■■□□□ 1.37
SMARCD2-206ENST00000577990 TNIP3Q96KP6 325 aa23.64■■□□□ 1.37
SMARCD2-206ENST00000577990 ZNF334Q9HCZ1 680 aaPredicted RBP23.64■■□□□ 1.37
SMARCD2-206ENST00000577990 ANHXE9PGG2 379 aa23.63■■□□□ 1.37
SMARCD2-206ENST00000577990 NRG2O14511 850 aaPredicted RBP23.63■■□□□ 1.37
SMARCD2-206ENST00000577990 FGF19O95750 216 aa23.63■■□□□ 1.37
SMARCD2-206ENST00000577990 BDNFP23560 247 aa23.63■■□□□ 1.37
SMARCD2-206ENST00000577990 NDST1P52848 882 aa23.63■■□□□ 1.37
SMARCD2-206ENST00000577990 VCPP55072 806 aaKnown RBP23.63■■□□□ 1.37
SMARCD2-206ENST00000577990 INCA1Q0VD86 236 aa23.63■■□□□ 1.37
SMARCD2-206ENST00000577990 HTR4Q13639 388 aa23.63■■□□□ 1.37
SMARCD2-206ENST00000577990 DDR2Q16832 855 aa23.63■■□□□ 1.37
SMARCD2-206ENST00000577990 SDHAF4Q5VUM1 108 aa23.63■■□□□ 1.37
SMARCD2-206ENST00000577990 VSTM1Q6UX27 236 aa23.63■■□□□ 1.37
SMARCD2-206ENST00000577990 UNC93AQ86WB7 457 aa23.63■■□□□ 1.37
SMARCD2-206ENST00000577990 SCN4BQ8IWT1 228 aa23.63■■□□□ 1.37
SMARCD2-206ENST00000577990 SHKBP1Q8TBC3 707 aa23.63■■□□□ 1.37
SMARCD2-206ENST00000577990 HMGXB4Q9UGU5 601 aa23.63■■□□□ 1.37
SMARCD2-206ENST00000577990 CACNA1HO95180 2353 aa23.62■■□□□ 1.37
SMARCD2-206ENST00000577990 PMM2O15305 246 aa23.62■■□□□ 1.37
SMARCD2-206ENST00000577990 CSH1P0DML2 217 aa23.62■■□□□ 1.37
SMARCD2-206ENST00000577990 CSH2P0DML3 217 aa23.62■■□□□ 1.37
SMARCD2-206ENST00000577990 GJA1P17302 382 aa23.62■■□□□ 1.37
SMARCD2-206ENST00000577990 TDGQ13569 410 aa23.62■■□□□ 1.37
SMARCD2-206ENST00000577990 MTSS1LQ765P7 747 aa23.62■■□□□ 1.37
SMARCD2-206ENST00000577990 UBALD2Q8IYN6 164 aa23.62■■□□□ 1.37
SMARCD2-206ENST00000577990 RSAD2Q8WXG1 361 aa23.62■■□□□ 1.37
SMARCD2-206ENST00000577990 A0A1W2PRU2 124 aa23.61■■□□□ 1.37
SMARCD2-206ENST00000577990 GABRR2P28476 465 aa23.61■■□□□ 1.37
SMARCD2-206ENST00000577990 ERCC5P28715 1186 aaPredicted RBP23.61■■□□□ 1.37
SMARCD2-206ENST00000577990 ORC1Q13415 861 aa23.61■■□□□ 1.37
SMARCD2-206ENST00000577990 TEAD2Q15562 447 aa23.61■■□□□ 1.37
SMARCD2-206ENST00000577990 TPD52L1Q16890 204 aaPredicted RBP23.61■■□□□ 1.37
SMARCD2-206ENST00000577990 POTEHQ6S545 545 aa23.61■■□□□ 1.37
SMARCD2-206ENST00000577990 PARM1Q6UWI2 310 aa23.61■■□□□ 1.37
SMARCD2-206ENST00000577990 ACOT1Q86TX2 421 aa23.61■■□□□ 1.37
SMARCD2-206ENST00000577990 STKLD1Q8NE28 680 aa23.61■■□□□ 1.37
SMARCD2-206ENST00000577990 CNOT6LQ96LI5 555 aaKnown RBP23.61■■□□□ 1.37
SMARCD2-206ENST00000577990 B3GNT5Q9BYG0 378 aa23.61■■□□□ 1.37
SMARCD2-206ENST00000577990 ELOVL4Q9GZR5 314 aa23.61■■□□□ 1.37
SMARCD2-206ENST00000577990 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.61■■□□□ 1.37
SMARCD2-206ENST00000577990 NUMBLQ9Y6R0 609 aa23.61■■□□□ 1.37
SMARCD2-206ENST00000577990 ATP8B3O60423 1300 aa23.6■■□□□ 1.37
SMARCD2-206ENST00000577990 TRIM66O15016 1216 aa23.6■■□□□ 1.37
SMARCD2-206ENST00000577990 P4HA2O15460 535 aa23.6■■□□□ 1.37
SMARCD2-206ENST00000577990 NOL4O94818 638 aa23.6■■□□□ 1.37
SMARCD2-206ENST00000577990 HMGA1P17096 107 aaKnown RBP23.6■■□□□ 1.37
SMARCD2-206ENST00000577990 CD58P19256 250 aa23.6■■□□□ 1.37
SMARCD2-206ENST00000577990 GRIK1P39086 918 aa23.6■■□□□ 1.37
SMARCD2-206ENST00000577990 CETN1Q12798 172 aa23.6■■□□□ 1.37
SMARCD2-206ENST00000577990 CT47A1Q5JQC4 288 aaPredicted RBP23.6■■□□□ 1.37
SMARCD2-206ENST00000577990 CCDC183Q5T5S1 534 aa23.6■■□□□ 1.37
SMARCD2-206ENST00000577990 GAREM2Q75VX8 874 aa23.6■■□□□ 1.37
SMARCD2-206ENST00000577990 CRYBG2Q8N1P7 616 aa23.6■■□□□ 1.37
SMARCD2-206ENST00000577990 PRSS33Q8NF86 280 aa23.6■■□□□ 1.37
SMARCD2-206ENST00000577990 ST13P5Q8NFI4 369 aaPredicted RBP23.6■■□□□ 1.37
SMARCD2-206ENST00000577990 FGF14Q92915 247 aa23.6■■□□□ 1.37
SMARCD2-206ENST00000577990 TATDN2Q93075 761 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms