RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 MAGEF1Q9HAY2 307 aa16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 RBM12Q9NTZ6 932 aaKnown RBP16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 FAM13BQ9NYF5 915 aa16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 UXTQ9UBK9 157 aaPredicted RBP16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 GPR179Q6PRD1 2367 aa16.02■□□□□ 0.15
RN7SL560P-201ENST00000577943 SPAG17Q6Q759 2223 aa16.02■□□□□ 0.15
RN7SL560P-201ENST00000577943 ZNF292O60281 2723 aa16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 CLIC2O15247 247 aa16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 HCRTO43612 131 aa16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 TNNI1P19237 187 aa16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 CXCL12P48061 93 aa16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 ME1P48163 572 aa16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 PON2Q15165 354 aa16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 SNRNP35Q16560 246 aaKnown RBP16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 ITPRIPL2Q3MIP1 535 aa16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 DGKKQ5KSL6 1271 aa16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 TXNDC8Q6A555 127 aa16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 TXNDC11Q6PKC3 985 aa16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 UNC13DQ70J99 1090 aa16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 WDR49Q8IV35 697 aa16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 SCN4BQ8IWT1 228 aa16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 SECISBP2LQ93073 1101 aaKnown RBP16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 FNBP1Q96RU3 617 aa16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 PKMYT1Q99640 499 aa16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 BLZF1Q9H2G9 400 aa16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 AGPAT3Q9NRZ7 376 aa16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 GKN1Q9NS71 199 aa16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 TDP1Q9NUW8 608 aa16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 PCDHA7Q9UN72 937 aa16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 SMG5Q9UPR3 1016 aaKnown RBP16.01■□□□□ 0.15
RN7SL560P-201ENST00000577943 UBE4BO95155 1302 aa16■□□□□ 0.15
RN7SL560P-201ENST00000577943 DLATP10515 647 aaKnown RBP16■□□□□ 0.15
RN7SL560P-201ENST00000577943 CASP1P29466 404 aa16■□□□□ 0.15
RN7SL560P-201ENST00000577943 CYP2J2P51589 502 aa16■□□□□ 0.15
RN7SL560P-201ENST00000577943 FOXK2Q01167 660 aa16■□□□□ 0.15
RN7SL560P-201ENST00000577943 SATB1Q01826 763 aa16■□□□□ 0.15
RN7SL560P-201ENST00000577943 GAS6Q14393 721 aa16■□□□□ 0.15
RN7SL560P-201ENST00000577943 CCDC142Q17RM4 750 aa16■□□□□ 0.15
RN7SL560P-201ENST00000577943 CFAP221Q4G0U5 840 aa16■□□□□ 0.15
RN7SL560P-201ENST00000577943 C4orf50Q6ZRC1 276 aa16■□□□□ 0.15
RN7SL560P-201ENST00000577943 HS2ST1Q7LGA3 356 aa16■□□□□ 0.15
RN7SL560P-201ENST00000577943 SPEM1Q8N4L4 309 aa16■□□□□ 0.15
RN7SL560P-201ENST00000577943 SPRYD3Q8NCJ5 442 aa16■□□□□ 0.15
RN7SL560P-201ENST00000577943 USP13Q92995 863 aaPredicted RBP16■□□□□ 0.15
RN7SL560P-201ENST00000577943 FUBP3Q96I24 572 aaKnown RBP eCLIP16■□□□□ 0.15
RN7SL560P-201ENST00000577943 MMS19Q96T76 1030 aa16■□□□□ 0.15
RN7SL560P-201ENST00000577943 SYT15Q9BQS2 421 aa16■□□□□ 0.15
RN7SL560P-201ENST00000577943 EPC1Q9H2F5 836 aa16■□□□□ 0.15
RN7SL560P-201ENST00000577943 KIF9Q9HAQ2 790 aa16■□□□□ 0.15
RN7SL560P-201ENST00000577943 CDH9Q9ULB4 789 aa16■□□□□ 0.15
RN7SL560P-201ENST00000577943 CCL26Q9Y258 94 aa16■□□□□ 0.15
RN7SL560P-201ENST00000577943 SOBPA7XYQ1 873 aa15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 TGFB1I1O43294 461 aa15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 ATP2C2O75185 946 aa15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 NOL4O94818 638 aa15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 TDGF1P13385 188 aa15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 LMO2P25791 158 aa15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 AFMP43652 599 aa15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 PSMC1P62191 440 aaKnown RBP15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 SNRPFP62306 86 aaKnown RBP15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 MAPRE1Q15691 268 aaKnown RBP15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 ATL3Q6DD88 541 aa15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 CC2D1AQ6P1N0 951 aaPredicted RBP15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 FAM171BQ6P995 826 aa15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 Q6ZS52 159 aa15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 ERMP1Q7Z2K6 904 aa15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 TRAPPC11Q7Z392 1133 aa15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 MON1AQ86VX9 555 aa15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 XXYLT1Q8NBI6 393 aa15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 SCFD1Q8WVM8 642 aa15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 KBTBD7Q8WVZ9 684 aa15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 TRMT2BQ96GJ1 504 aaKnown RBP15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 TRPC7Q9HCX4 862 aa15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 SLC39A2Q9NP94 309 aa15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 MAGEC2Q9UBF1 373 aaPredicted RBP15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 CFAP45Q9UL16 551 aa15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 RAB23Q9ULC3 237 aa15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 SDK1Q7Z5N4 2213 aa15.99■□□□□ 0.15
RN7SL560P-201ENST00000577943 PVALEFA0A1B0GWK0 134 aa15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 TADA3O75528 432 aa15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 PDGFRBP09619 1106 aa15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 WARSP23381 471 aaKnown RBP15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 MAGEA11P43364 429 aa15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 CYP24A1Q07973 514 aa15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 EHHADHQ08426 723 aa15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 RUNX3Q13761 415 aa15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 PSMD6Q15008 389 aa15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 WDR44Q5JSH3 913 aa15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 RESP18Q5W5W9 173 aa15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 TRIM68Q6AZZ1 485 aa15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 LIMS2Q7Z4I7 341 aa15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 CEP57L1Q8IYX8 460 aa15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 FSIP1Q8NA03 581 aa15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 MYLPFQ96A32 169 aa15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 CCDC127Q96BQ5 260 aa15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 RMDN1Q96DB5 314 aa15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 MYRFLQ96LU7 910 aa15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 CGRRF1Q99675 332 aa15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 FAM83CQ9BQN1 747 aa15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 EBF3Q9H4W6 596 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms