RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 PSMC6P62333 389 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 PLA2G4FQ68DD2 849 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 PRR5LQ6MZQ0 368 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 AGR3Q8TD06 166 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 TCP10LQ8TDR4 215 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 TSPAN17Q96FV3 270 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 EFCAB1Q9HAE3 211 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 ZBBXA8MT70 800 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 SLCO1B7G3V0H7 640 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 AKAP10O43572 662 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 SRP72O76094 671 aaKnown RBP10.8□□□□□ -0.68
PTPRM-205ENST00000577827 NR3C2P08235 984 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 PAEPP09466 180 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 STAT5BP51692 787 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 NCALDP61601 193 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 CYP24A1Q07973 514 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 CCDC15Q0P6D6 951 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 PDK4Q16654 411 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 TMEM259Q4ZIN3 620 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 SLC44A4Q53GD3 710 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 WLSQ5T9L3 541 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 RWDD4Q6NW29 188 aaKnown RBP10.8□□□□□ -0.68
PTPRM-205ENST00000577827 KCNV1Q6PIU1 500 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 SV2AQ7L0J3 742 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 APTXQ7Z2E3 356 aaKnown RBP10.8□□□□□ -0.68
PTPRM-205ENST00000577827 ABRAQ8N0Z2 381 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 GMCL1P1Q8NEA9 526 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 ETNPPLQ8TBG4 499 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 TMEM237Q96Q45 408 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 SH2D3AQ9BRG2 576 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 NEMP1O14524 444 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 PECAM1P16284 738 aaPredicted RBP10.8□□□□□ -0.68
PTPRM-205ENST00000577827 TSHRP16473 764 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 ATP4AP20648 1035 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 INPP1P49441 399 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 PRKCEQ02156 737 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 SLC12A1Q13621 1099 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 SMTNL2Q2TAL5 461 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 HGSNATQ68CP4 663 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 ARHGAP22Q7Z5H3 698 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 EXOC3L1Q86VI1 746 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 KATNAL2Q8IYT4 538 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 RNF149Q8NC42 400 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 PRCCQ92733 491 aaPredicted RBP10.8□□□□□ -0.68
PTPRM-205ENST00000577827 TNIP3Q96KP6 325 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 ZFRQ96KR1 1074 aaKnown RBP10.8□□□□□ -0.68
PTPRM-205ENST00000577827 TASP1Q9H6P5 420 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 C20orf96Q9NUD7 363 aaPredicted RBP10.8□□□□□ -0.68
PTPRM-205ENST00000577827 AURKCQ9UQB9 309 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 ROBO3Q96MS0 1386 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 C3orf70A6NLC5 250 aaPredicted RBP10.79□□□□□ -0.68
PTPRM-205ENST00000577827 PSMG1O95456 288 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 CBX6O95503 412 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 BGNP21810 368 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 TKFCQ3LXA3 575 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 CIAPIN1Q6FI81 312 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.79□□□□□ -0.68
PTPRM-205ENST00000577827 EEPD1Q7L9B9 569 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 MYLK4Q86YV6 388 aaPredicted RBP10.79□□□□□ -0.68
PTPRM-205ENST00000577827 GALNT4Q8N4A0 578 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 TERB1Q8NA31 727 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 GPRASP2Q96D09 838 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 CEP19Q96LK0 163 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 ZNF560Q96MR9 790 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 KCNK4Q9NYG8 393 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 OPLAHO14841 1288 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 ATP9BO43861 1147 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 MMP10P09238 476 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 PSMC3P17980 439 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 NUDT2P50583 147 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 USP10Q14694 798 aaKnown RBP10.79□□□□□ -0.68
PTPRM-205ENST00000577827 PKN2Q16513 984 aaKnown RBP10.79□□□□□ -0.68
PTPRM-205ENST00000577827 AASDHQ4L235 1098 aaPredicted RBP10.79□□□□□ -0.68
PTPRM-205ENST00000577827 BNC2Q6ZN30 1099 aaPredicted RBP10.79□□□□□ -0.68
PTPRM-205ENST00000577827 C4orf19Q8IY42 314 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 ACTL9Q8TC94 416 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 EXT2Q93063 718 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 EPAS1Q99814 870 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 TMEM121Q9BTD3 319 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 TBC1D10AQ9BXI6 508 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 CHCHD3Q9NX63 227 aaKnown RBP10.79□□□□□ -0.68
PTPRM-205ENST00000577827 MYO5BQ9ULV0 1848 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 KCNQ2O43526 872 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 TMCC1O94876 653 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 ATP6V1B1P15313 513 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 NPTX2P47972 431 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 PRAMEP78395 509 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 BMT2Q1RMZ1 405 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 RSPH3Q86UC2 560 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 SLC9A9Q8IVB4 645 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 TMEM143Q96AN5 459 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 FAR2Q96K12 515 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 MED15Q96RN5 788 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 PHACTR1Q9C0D0 580 aa10.79□□□□□ -0.68
PTPRM-205ENST00000577827 SNX2O60749 519 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 CYP1A2P05177 515 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 CYP2C8P10632 490 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 HYIQ5T013 277 aa10.78□□□□□ -0.68
PTPRM-205ENST00000577827 PPHLN1Q8NEY8 458 aaKnown RBP10.78□□□□□ -0.68
PTPRM-205ENST00000577827 LNX1Q8TBB1 728 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms