RNA–Protein interactions for RNA: ENST00000577549.1

DHX40-204, Transcript of DEAH-box helicase 40, human

TSL 2

Gene DHX40, Length 2,654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DHX40-204	ENST00000577549	TXLNGY	Q9BZA5	131 aa		4.88	□□□□□ -1.63
DHX40-204	ENST00000577549	MKNK2	Q9HBH9	465 aa		4.88	□□□□□ -1.63
DHX40-204	ENST00000577549	LMCD1	Q9NZU5	365 aa		4.88	□□□□□ -1.63
DHX40-204	ENST00000577549	KCND3	Q9UK17	655 aa		4.88	□□□□□ -1.63
DHX40-204	ENST00000577549	GPATCH8	Q9UKJ3	1502 aa	Known RBP	4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	CIC	Q96RK0	1608 aa	Predicted RBP	4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	QSER1	Q2KHR3	1735 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	SPATA31C1	P0DKV0	1188 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	GAA	P10253	952 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	MTHFD1	P11586	935 aa	Known RBP	4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	POR	P16435	677 aa	Predicted RBP	4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	IL1R2	P27930	398 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	TRHR	P34981	398 aa	Predicted RBP	4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	HK2	P52789	917 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	ERVFC1	P60507	584 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	MEF2A	Q02078	507 aa	Predicted RBP	4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	CUL4A	Q13619	759 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	MAPKAPK3	Q16644	382 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	CR1L	Q2VPA4	569 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	RPUSD3	Q6P087	351 aa	Known RBP	4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	NFRKB	Q6P4R8	1299 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	TEX11	Q8IYF3	940 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	GALNT4	Q8N4A0	578 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	TBC1D22A	Q8WUA7	517 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	RNF125	Q96EQ8	232 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	MPHOSPH8	Q99549	860 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	RTKN	Q9BST9	563 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	NELFA	Q9H3P2	528 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	SLAMF8	Q9P0V8	285 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	AGAP1	Q9UPQ3	857 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	PIAS3	Q9Y6X2	628 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	ABCA3	Q99758	1704 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	NWD2	Q9ULI1	1742 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	CCDC196	A0A1B0GTZ2	297 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549		F8W031	263 aa	Predicted RBP	4.87	□□□□□ -1.63
DHX40-204	ENST00000577549		H7C4K7	107 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	ALAD	P13716	330 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	BTF3	P20290	206 aa	Known RBP	4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	KLRC1	P26715	233 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	GGT5	P36269	586 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	KIR2DL1	P43626	348 aa	Predicted RBP	4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	KIR2DL2	P43627	348 aa	Predicted RBP	4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	CLK1	P49759	484 aa	Known RBP	4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	SCAP	Q12770	1279 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	VWA3B	Q502W6	1294 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	HECTD3	Q5T447	861 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	ARL6IP4	Q66PJ3	421 aa	Known RBP	4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	SLC30A6	Q6NXT4	461 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	KRT28	Q7Z3Y7	464 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	ZFPM1	Q8IX07	1006 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	NGEF	Q8N5V2	710 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	NETO2	Q8NC67	525 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	NSUN4	Q96CB9	384 aa	Known RBP	4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	LIN37	Q96GY3	246 aa	Predicted RBP	4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	SIL1	Q9H173	461 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	IL21R	Q9HBE5	538 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	PRDM7	Q9NQW5	492 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	SLC23A1	Q9UHI7	598 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	ACAD8	Q9UKU7	415 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	CNTNAP5	Q8WYK1	1306 aa		4.87	□□□□□ -1.63
DHX40-204	ENST00000577549	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	MBD3L3	A6NE82	208 aa	Predicted RBP	4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	STX16-NPEPL1	H3BU86	382 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	STX16	O14662	325 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	GRM6	O15303	877 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	ITGA10	O75578	1167 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	PGM3	O95394	542 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	STARD3NL	O95772	234 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	CYP21A2	P08686	494 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	ATIC	P31939	592 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	ACSL1	P33121	698 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	RGS2	P41220	211 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	KCNC1	P48547	511 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	STAT5B	P51692	787 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	RTP5	Q14D33	572 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	LAPTM4A	Q15012	233 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	LCE2A	Q5TA79	106 aa	Predicted RBP	4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	PLBD1	Q6P4A8	553 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	BRWD3	Q6RI45	1802 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	FAM180A	Q6UWF9	173 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	TMTC3	Q6ZXV5	915 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	ANKS1B	Q7Z6G8	1248 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	CCDC150	Q8NCX0	1101 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	OR7D4	Q8NG98	312 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	IPCEF1	Q8WWN9	437 aa	Predicted RBP	4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	GOLGA1	Q92805	767 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	TRAPPC9	Q96Q05	1148 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	BAG1	Q99933	345 aa	Predicted RBP	4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	DESI2	Q9BSY9	194 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	MXD3	Q9BW11	206 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	BTBD2	Q9BX70	525 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	ABHD16B	Q9H3Z7	469 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	CHODL	Q9H9P2	273 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	A1CF	Q9NQ94	594 aa	Known RBP	4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	POLR3B	Q9NW08	1133 aa	Predicted RBP	4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	STOML1	Q9UBI4	398 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	MKL2	Q9ULH7	1088 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	HSF4	Q9ULV5	492 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	NAALADL1	Q9UQQ1	740 aa		4.86	□□□□□ -1.63
DHX40-204	ENST00000577549	CYP46A1	Q9Y6A2	500 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms