RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 NEFLP07196 543 aa12.53□□□□□ -0.4
CTDNEP1-212ENST00000576613 DGKEP52429 567 aa12.53□□□□□ -0.4
CTDNEP1-212ENST00000576613 ZNF252P-AS1Q0IIN9 211 aa12.53□□□□□ -0.4
CTDNEP1-212ENST00000576613 ZNF77Q15935 545 aa12.53□□□□□ -0.4
CTDNEP1-212ENST00000576613 USP39Q53GS9 565 aaKnown RBP12.53□□□□□ -0.4
CTDNEP1-212ENST00000576613 UNQ6494/PRO21346Q6UXR6 183 aa12.53□□□□□ -0.4
CTDNEP1-212ENST00000576613 FSIP1Q8NA03 581 aa12.53□□□□□ -0.4
CTDNEP1-212ENST00000576613 TSTD1Q8NFU3 115 aa12.53□□□□□ -0.4
CTDNEP1-212ENST00000576613 RIN3Q8TB24 985 aa12.53□□□□□ -0.4
CTDNEP1-212ENST00000576613 POMGNT1Q8WZA1 660 aa12.53□□□□□ -0.4
CTDNEP1-212ENST00000576613 PI4K2AQ9BTU6 479 aa12.53□□□□□ -0.4
CTDNEP1-212ENST00000576613 ANKRD63C9JTQ0 380 aa12.52□□□□□ -0.41
CTDNEP1-212ENST00000576613 DCLK1O15075 740 aa12.52□□□□□ -0.41
CTDNEP1-212ENST00000576613 HUS1O60921 280 aa12.52□□□□□ -0.41
CTDNEP1-212ENST00000576613 NOL4O94818 638 aa12.52□□□□□ -0.41
CTDNEP1-212ENST00000576613 GPR15P49685 360 aa12.52□□□□□ -0.41
CTDNEP1-212ENST00000576613 PDE6CP51160 858 aa12.52□□□□□ -0.41
CTDNEP1-212ENST00000576613 MYL7Q01449 175 aa12.52□□□□□ -0.41
CTDNEP1-212ENST00000576613 FOXC1Q12948 553 aa12.52□□□□□ -0.41
CTDNEP1-212ENST00000576613 KCNB1Q14721 858 aa12.52□□□□□ -0.41
CTDNEP1-212ENST00000576613 EFCAB13Q8IY85 973 aa12.52□□□□□ -0.41
CTDNEP1-212ENST00000576613 TMEM86AQ8N2M4 240 aa12.52□□□□□ -0.41
CTDNEP1-212ENST00000576613 HVCN1Q96D96 273 aa12.52□□□□□ -0.41
CTDNEP1-212ENST00000576613 MYRFLQ96LU7 910 aa12.52□□□□□ -0.41
CTDNEP1-212ENST00000576613 ACBD6Q9BR61 282 aa12.52□□□□□ -0.41
CTDNEP1-212ENST00000576613 ST6GALNAC4Q9H4F1 302 aa12.52□□□□□ -0.41
CTDNEP1-212ENST00000576613 TMEM9BQ9NQ34 198 aa12.52□□□□□ -0.41
CTDNEP1-212ENST00000576613 TMLHEQ9NVH6 421 aa12.52□□□□□ -0.41
CTDNEP1-212ENST00000576613 DDX43Q9NXZ2 648 aaKnown RBP12.52□□□□□ -0.41
CTDNEP1-212ENST00000576613 WNT6Q9Y6F9 365 aa12.52□□□□□ -0.41
CTDNEP1-212ENST00000576613 STYXL1Q9Y6J8 313 aa12.52□□□□□ -0.41
CTDNEP1-212ENST00000576613 HELZP42694 1942 aaKnown RBP12.52□□□□□ -0.41
CTDNEP1-212ENST00000576613 NUP205Q92621 2012 aa12.52□□□□□ -0.41
CTDNEP1-212ENST00000576613 ZZEF1O43149 2961 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 TISP43B9A030 160 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 H3BQV1 296 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 TADA3O75528 432 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 SEC24BO95487 1268 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 NFATC1O95644 943 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 CEACAM1P13688 526 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 PLCG1P19174 1290 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 USP4Q13107 963 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 MCM6Q14566 821 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 POSTNQ15063 836 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 DDR2Q16832 855 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 EML3Q32P44 896 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 ZC2HC1CQ53FD0 456 aaPredicted RBP12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 INTS6LQ5JSJ4 861 aaKnown RBP12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 SH3PXD2AQ5TCZ1 1133 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 SDHAF4Q5VUM1 108 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 PMS2CLQ68D20 193 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 NAIF1Q69YI7 327 aaPredicted RBP12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 CYP2U1Q7Z449 544 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 SPATA2LQ8IUW3 424 aaPredicted RBP12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 PDCL2Q8N4E4 241 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 KRI1Q8N9T8 703 aaKnown RBP12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 STKLD1Q8NE28 680 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 RAD54LQ92698 747 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 EZH1Q92800 747 aaPredicted RBP12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 FIZ1Q96SL8 496 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 BLOC1S4Q9NUP1 217 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 ZMIZ1Q9ULJ6 1067 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 ASPMQ8IZT6 3477 aa12.51□□□□□ -0.41
CTDNEP1-212ENST00000576613 CACNA1GO43497 2377 aa12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 TMEM8BA6NDV4 472 aa12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 C1QTNF9BB2RNN3 333 aa12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 TULP1O00294 542 aaPredicted RBP12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 GIPC1O14908 333 aa12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 ITGB3P05106 788 aa12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 C1QTNF9P0C862 333 aa12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 CSRP1P21291 193 aaKnown RBP12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 CYP2F1P24903 491 aa12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 POLR2BP30876 1174 aaKnown RBP12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 LONP1P36776 959 aaKnown RBP12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 TFAMQ00059 246 aaKnown RBP12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 CFAP221Q4G0U5 840 aa12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 ANO7Q6IWH7 933 aa12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 CRELD2Q6UXH1 353 aaPredicted RBP12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 LRRC52Q8N7C0 313 aa12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 KDF1Q8NAX2 398 aaPredicted RBP12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 SPATA18Q8TC71 538 aa12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 SH3RF2Q8TEC5 729 aa12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 CACTINQ8WUQ7 758 aaKnown RBP12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 LARP4BQ92615 738 aaKnown RBP12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 FUBP3Q96I24 572 aaKnown RBP eCLIP12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 CNOT6LQ96LI5 555 aaKnown RBP12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 SLC22A12Q96S37 553 aa12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 CYP2S1Q96SQ9 504 aa12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 ADAM33Q9BZ11 813 aa12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 TPSD1Q9BZJ3 242 aa12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 RALYQ9UKM9 306 aaKnown RBP12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 GTF3C4Q9UKN8 822 aa12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 L1RE1Q9UN81 338 aa12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 AGAP1Q9UPQ3 857 aa12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 EXOC7Q9UPT5 735 aa12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 INVSQ9Y283 1065 aa12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 THADAQ6YHU6 1953 aa12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 SPEGQ15772 3267 aa12.5□□□□□ -0.41
CTDNEP1-212ENST00000576613 ANAPC1Q9H1A4 1944 aa12.49□□□□□ -0.41
CTDNEP1-212ENST00000576613 ALDH1A2O94788 518 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms