RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 LRMDAQ9H2I8 198 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 TASP1Q9H6P5 420 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 LRRC19Q9H756 370 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 CIITAP33076 1130 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 TBL3Q12788 808 aaKnown RBP13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 KCNT1Q5JUK3 1230 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 PPP1R16BQ96T49 567 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 MXRA8Q9BRK3 442 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 NMRK1Q9NWW6 199 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 IVNS1ABPQ9Y6Y0 642 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 FAM58BPP0C7Q3 252 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 RGS2P41220 211 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 PLOD1Q02809 727 aaPredicted RBP13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 SGSM1Q2NKQ1 1148 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 MFSD5Q6N075 450 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 BNC2Q6ZN30 1099 aaPredicted RBP13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 ARMCX2Q7L311 632 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 PODNQ7Z5L7 613 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 NOP9Q86U38 636 aaKnown RBP13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 KIAA2013Q8IYS2 634 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 ZNF786Q8N393 782 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 FAM81AQ8TBF8 368 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 NSUN6Q8TEA1 469 aaKnown RBP13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 CNKSR1Q969H4 720 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 APOPT1Q96IL0 206 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 AGAP3Q96P47 875 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 ZNF302Q9NR11 478 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 MEGF6O75095 1541 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 ARHGEF37A1IGU5 675 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 S100BP04271 92 aaPredicted RBP13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 SERPINB5P36952 375 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 SLC12A3P55017 1021 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 KCNA1Q09470 495 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 POU5F2Q8N7G0 328 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 ERVK-5Q9HDB9 667 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 EXTL3O43909 919 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 ADARP55265 1226 aaKnown RBP13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 CWF19L1Q69YN2 538 aaKnown RBP13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 MARK2Q7KZI7 788 aaKnown RBP13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 ILKAPQ9H0C8 392 aaPredicted RBP13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 DNPEPQ9ULA0 475 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 AP4S1Q9Y587 144 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 ANKRD26Q9UPS8 1709 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 WDR46O15213 610 aaKnown RBP13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 PMLP29590 882 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 INPP1P49441 399 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 BMPR2Q13873 1038 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 TAF12Q16514 161 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 Q4G0T1 1027 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 PIGWQ7Z7B1 504 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 ARHGEF1Q92888 912 aaKnown RBP13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 FAM210AQ96ND0 272 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 COMMD3-BMI1R4GMX3 469 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 ANGPT2O15123 496 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 ZC3H11AO75152 810 aaKnown RBP eCLIP13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 MUTP22033 750 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 SERPINB10P48595 397 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 NEK2P51955 445 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 USP10Q14694 798 aaKnown RBP13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 ITPRIPL1Q6GPH6 555 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 SV2AQ7L0J3 742 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 ECHDC2Q86YB7 292 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 HACE1Q8IYU2 909 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 PYDC1Q8WXC3 89 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 NCLNQ969V3 563 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 ZFRQ96KR1 1074 aaKnown RBP13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 SRPK1Q96SB4 655 aaKnown RBP13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 EFCAB1Q9HAE3 211 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 GPRC5CQ9NQ84 441 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 RNF146Q9NTX7 359 aa13.65□□□□□ -0.22
PCDHGB3-201ENST00000576222 MROH7Q68CQ1 1323 aa13.65□□□□□ -0.23
PCDHGB3-201ENST00000576222 C16orf96A6NNT2 1141 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 MEI4A8MW99 385 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 C2CD2LO14523 706 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 EDF1O60869 148 aaKnown RBP13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 NOL4O94818 638 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 TNFAIP8O95379 198 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 TPP2P29144 1249 aaPredicted RBP13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 ELK3P41970 407 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 TRIM16LQ309B1 348 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 IFNEQ86WN2 208 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 NR1H4Q96RI1 486 aaPredicted RBP13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 KCNH7Q9NS40 1196 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 C1orf167Q5SNV9 1468 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 POLBP06746 335 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 RAG1P15918 1043 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 RPL10AP62906 217 aaKnown RBP13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 NFIXQ14938 502 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 TCHHL1Q5QJ38 904 aaPredicted RBP13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 RNF220Q5VTB9 566 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 SMIM5Q71RC9 77 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 PCYOX1LQ8NBM8 494 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 TMEM143Q96AN5 459 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 EML4Q9HC35 981 aaKnown RBP13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 MRGBPQ9NV56 204 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 DCDC2Q9UHG0 476 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 ADGRA3Q8IWK6 1321 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 GRAP2O75791 330 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 PDPK2PQ6A1A2 396 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 CDC42EP5Q6NZY7 148 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms