RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 GRID1Q9ULK0 1009 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 CLUHO75153 1309 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 IGF2BP3O00425 579 aaKnown RBP eCLIP9.4□□□□□ -0.9
NCBP3-204ENST00000574911 SOCS7O14512 581 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 TYROBPO43914 113 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 ARIH2O95376 493 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 IFNB1P01574 187 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 MARK3P27448 753 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 SKIV2L2P42285 1042 aaKnown RBP9.4□□□□□ -0.9
NCBP3-204ENST00000574911 RAD23BP54727 409 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 PSMC1P62191 440 aaKnown RBP9.4□□□□□ -0.9
NCBP3-204ENST00000574911 LACTBP83111 547 aaPredicted RBP9.4□□□□□ -0.9
NCBP3-204ENST00000574911 PLCB3Q01970 1234 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 HADHQ16836 314 aaKnown RBP9.4□□□□□ -0.9
NCBP3-204ENST00000574911 ATF7IP2Q5U623 682 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 PLPPR4Q7Z2D5 763 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 PPIL6Q8IXY8 311 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 CPT1BQ92523 772 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 SMC6Q96SB8 1091 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 PAIP2Q9BPZ3 127 aaKnown RBP9.4□□□□□ -0.9
NCBP3-204ENST00000574911 SPATC1LQ9H0A9 340 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 SDCBP2Q9H190 292 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 PSMC3IPQ9P2W1 217 aaPredicted RBP9.4□□□□□ -0.9
NCBP3-204ENST00000574911 BAIAP2L1Q9UHR4 511 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 RABGEF1Q9UJ41 708 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 MCM8Q9UJA3 840 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 AGTPBP1Q9UPW5 1226 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 CST8O60676 142 aa9.4□□□□□ -0.91
NCBP3-204ENST00000574911 CCNB1P14635 433 aa9.4□□□□□ -0.91
NCBP3-204ENST00000574911 KRT15P19012 456 aa9.4□□□□□ -0.91
NCBP3-204ENST00000574911 RPA3P35244 121 aaPredicted RBP9.4□□□□□ -0.91
NCBP3-204ENST00000574911 RPL22P35268 128 aaKnown RBP9.4□□□□□ -0.91
NCBP3-204ENST00000574911 RAP1GAPP47736 663 aa9.4□□□□□ -0.91
NCBP3-204ENST00000574911 CTCFP49711 727 aaPredicted RBP9.4□□□□□ -0.91
NCBP3-204ENST00000574911 GDF10P55107 478 aa9.4□□□□□ -0.91
NCBP3-204ENST00000574911 DYNLT1P63172 113 aa9.4□□□□□ -0.91
NCBP3-204ENST00000574911 GAD2Q05329 585 aa9.4□□□□□ -0.91
NCBP3-204ENST00000574911 PDK4Q16654 411 aa9.4□□□□□ -0.91
NCBP3-204ENST00000574911 HIF1AQ16665 826 aa9.4□□□□□ -0.91
NCBP3-204ENST00000574911 ZC3H12AQ5D1E8 599 aaKnown RBP9.4□□□□□ -0.91
NCBP3-204ENST00000574911 FNBP1LQ5T0N5 605 aa9.4□□□□□ -0.91
NCBP3-204ENST00000574911 ANKRD22Q5VYY1 191 aa9.4□□□□□ -0.91
NCBP3-204ENST00000574911 EEF1DP3Q658K8 133 aa9.4□□□□□ -0.91
NCBP3-204ENST00000574911 FAM47EQ6ZV65 393 aa9.4□□□□□ -0.91
NCBP3-204ENST00000574911 NCAPG2Q86XI2 1143 aa9.4□□□□□ -0.91
NCBP3-204ENST00000574911 XYLT1Q86Y38 959 aa9.4□□□□□ -0.91
NCBP3-204ENST00000574911 RHPN2Q8IUC4 686 aa9.4□□□□□ -0.91
NCBP3-204ENST00000574911 ANKMY2Q8IV38 441 aa9.4□□□□□ -0.91
NCBP3-204ENST00000574911 FAXDC2Q96IV6 333 aa9.4□□□□□ -0.91
NCBP3-204ENST00000574911 DHRS4Q9BTZ2 278 aa9.4□□□□□ -0.91
NCBP3-204ENST00000574911 SSU72Q9NP77 194 aaKnown RBP9.4□□□□□ -0.91
NCBP3-204ENST00000574911 WDR35Q9P2L0 1181 aa9.4□□□□□ -0.91
NCBP3-204ENST00000574911 SAE1Q9UBE0 346 aaPredicted RBP9.4□□□□□ -0.91
NCBP3-204ENST00000574911 NXF1Q9UBU9 619 aaKnown RBP9.4□□□□□ -0.91
NCBP3-204ENST00000574911 RGS17Q9UGC6 210 aaPredicted RBP9.4□□□□□ -0.91
NCBP3-204ENST00000574911 SIX4Q9UIU6 781 aa9.4□□□□□ -0.91
NCBP3-204ENST00000574911 A0A1W2PPM1 405 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 E7ESA3 106 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 GOLGA8MH3BSY2 632 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 B4GALT5O43286 388 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 BANF1O75531 89 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 IL18RAPO95256 599 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 ERBB2P04626 1255 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 CD19P15391 556 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 PSMC4P43686 418 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 BAG6P46379 1132 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 HIRAP54198 1017 aaPredicted RBP9.39□□□□□ -0.91
NCBP3-204ENST00000574911 ARL4CP56559 192 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 GEMIN4P57678 1058 aaKnown RBP9.39□□□□□ -0.91
NCBP3-204ENST00000574911 MYO1EQ12965 1108 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 MOGSQ13724 837 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 PRKG1Q13976 671 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 VGLL4Q14135 290 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 SLC1A5Q15758 541 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 SMTNL2Q2TAL5 461 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 HSDL1Q3SXM5 330 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 MSS51Q4VC12 460 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 KCNT1Q5JUK3 1230 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 CELF3Q5SZQ8 465 aaKnown RBP9.39□□□□□ -0.91
NCBP3-204ENST00000574911 CAPN12Q6ZSI9 719 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 EEPD1Q7L9B9 569 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 PNMA8AQ86V59 439 aaPredicted RBP9.39□□□□□ -0.91
NCBP3-204ENST00000574911 CEP57Q86XR8 500 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 TRIM50Q86XT4 487 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 C4orf33Q8N1A6 199 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 CEP120Q8N960 986 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 CMASQ8NFW8 434 aaPredicted RBP9.39□□□□□ -0.91
NCBP3-204ENST00000574911 KLHL29Q96CT2 875 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 CPXM1Q96SM3 734 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 WDR83Q9BRX9 315 aaKnown RBP9.39□□□□□ -0.91
NCBP3-204ENST00000574911 TACO1Q9BSH4 297 aaKnown RBP9.39□□□□□ -0.91
NCBP3-204ENST00000574911 MAK16Q9BXY0 300 aaKnown RBP9.39□□□□□ -0.91
NCBP3-204ENST00000574911 C10orf88Q9H8K7 445 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 PHTF1Q9UMS5 762 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 CNMDO75829 334 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 ZBTB7AO95365 584 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 KRT16P08779 473 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 CD48P09326 243 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 PHBP35232 272 aa9.39□□□□□ -0.91
NCBP3-204ENST00000574911 GABRB2P47870 512 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms