RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 RTP3Q9BQQ7 232 aa7.12□□□□□ -1.27
PRPF8-210ENST00000574217 SYT15Q9BQS2 421 aa7.12□□□□□ -1.27
PRPF8-210ENST00000574217 ACBD6Q9BR61 282 aa7.12□□□□□ -1.27
PRPF8-210ENST00000574217 EMILIN2Q9BXX0 1053 aa7.12□□□□□ -1.27
PRPF8-210ENST00000574217 DPEP3Q9H4B8 488 aa7.12□□□□□ -1.27
PRPF8-210ENST00000574217 RXFP1Q9HBX9 757 aa7.12□□□□□ -1.27
PRPF8-210ENST00000574217 CLDND1Q9NY35 253 aa7.12□□□□□ -1.27
PRPF8-210ENST00000574217 CDH9Q9ULB4 789 aa7.12□□□□□ -1.27
PRPF8-210ENST00000574217 KIAA1257Q9ULG3 409 aa7.12□□□□□ -1.27
PRPF8-210ENST00000574217 SSX2IPQ9Y2D8 614 aa7.12□□□□□ -1.27
PRPF8-210ENST00000574217 NME7Q9Y5B8 376 aa7.12□□□□□ -1.27
PRPF8-210ENST00000574217 EYSQ5T1H1 3165 aa7.12□□□□□ -1.27
PRPF8-210ENST00000574217 MED7O43513 233 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 NRDCO43847 1150 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 TBC1D4O60343 1298 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 ATP2C2O75185 946 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 ADH1AP07327 375 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 VDRP11473 427 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 SKILP12757 684 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 CPB1P15086 417 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 EPCAMP16422 314 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 PTPN1P18031 435 aaKnown RBP7.11□□□□□ -1.27
PRPF8-210ENST00000574217 BRD2P25440 801 aaKnown RBP7.11□□□□□ -1.27
PRPF8-210ENST00000574217 LTBRP36941 435 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 ARPP19P56211 112 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 CDK17Q00537 523 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 DLX2Q07687 328 aaPredicted RBP7.11□□□□□ -1.27
PRPF8-210ENST00000574217 KCNC3Q14003 757 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 COL19A1Q14993 1142 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 STILQ15468 1287 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 CTC1Q2NKJ3 1217 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 MDH1BQ5I0G3 518 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 HGSNATQ68CP4 663 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 SLC8B1Q6J4K2 584 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 WDR59Q6PJI9 974 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 CYP26C1Q6V0L0 522 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 NOP9Q86U38 636 aaKnown RBP7.11□□□□□ -1.27
PRPF8-210ENST00000574217 VPS36Q86VN1 386 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 ZNF677Q86XU0 584 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 PALB2Q86YC2 1186 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 LRRC8AQ8IWT6 810 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 DCP1BQ8IZD4 617 aaKnown RBP7.11□□□□□ -1.27
PRPF8-210ENST00000574217 EFHBQ8N7U6 833 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 C12orf29Q8N999 325 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 CCDC112Q8NEF3 446 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 MYCBPAPQ8TBZ2 947 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 SLC22A17Q8WUG5 538 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 PABPC5Q96DU9 382 aaKnown RBP7.11□□□□□ -1.27
PRPF8-210ENST00000574217 CYFIP2Q96F07 1278 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 PCED1BQ96HM7 432 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 BAG1Q99933 345 aaPredicted RBP7.11□□□□□ -1.27
PRPF8-210ENST00000574217 CLSTN3Q9BQT9 956 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 ZCWPW1Q9H0M4 648 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 PDCL3Q9H2J4 239 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 DEF6Q9H4E7 631 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 HAUS4Q9H6D7 363 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 ACP6Q9NPH0 428 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 CRTAC1Q9NQ79 661 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.11□□□□□ -1.27
PRPF8-210ENST00000574217 FAM49BQ9NUQ9 324 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 SEPT11Q9NVA2 429 aaKnown RBP7.11□□□□□ -1.27
PRPF8-210ENST00000574217 FNIP2Q9P278 1114 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 ARHGAP20Q9P2F6 1191 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 MTRRQ9UBK8 725 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 NOCTQ9UK39 431 aaKnown RBP7.11□□□□□ -1.27
PRPF8-210ENST00000574217 GTF3C4Q9UKN8 822 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 CEP83Q9Y592 693 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 BACE2Q9Y5Z0 518 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 HCFC2Q9Y5Z7 792 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 CDY1Q9Y6F8 540 aa7.11□□□□□ -1.27
PRPF8-210ENST00000574217 ATP8B3O60423 1300 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.1□□□□□ -1.27
PRPF8-210ENST00000574217 SSU72P8A0A1W2PR75 194 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 MYBPHLA2RUH7 354 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 O00370 1275 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 TGM5O43548 720 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 NCK2O43639 380 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 TBX10O75333 385 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 CALCAP01258 141 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 MMEP08473 750 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 PLEKP08567 350 aaPredicted RBP7.1□□□□□ -1.27
PRPF8-210ENST00000574217 OR4Q2P0C623 313 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 SPATA31D3P0C874 917 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 CCDC130P13994 396 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 FECHP22830 423 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 ANXA13P27216 316 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 OR1D2P34982 312 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 EIF4A3P38919 411 aaKnown RBP7.1□□□□□ -1.27
PRPF8-210ENST00000574217 NDUFV1P49821 464 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 CLCN4P51793 760 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 SLC8A3P57103 927 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 CDR2Q01850 454 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 ROR1Q01973 937 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 CYP27A1Q02318 531 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 SMARCB1Q12824 385 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 GPR17Q13304 367 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 CNGA2Q16280 664 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 NFE2Q16621 373 aaPredicted RBP7.1□□□□□ -1.27
PRPF8-210ENST00000574217 CCDC142Q17RM4 750 aa7.1□□□□□ -1.27
PRPF8-210ENST00000574217 GOLGA7BQ2TAP0 167 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms