RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 TMEM86AQ8N2M4 240 aa23.62■■□□□ 1.37
SNF8-216ENST00000573795 MRPS31Q92665 395 aaKnown RBP23.62■■□□□ 1.37
SNF8-216ENST00000573795 TRMT2BQ96GJ1 504 aaKnown RBP23.62■■□□□ 1.37
SNF8-216ENST00000573795 CNTNAP3BQ96NU0 1288 aa23.62■■□□□ 1.37
SNF8-216ENST00000573795 CNTNAP3Q9BZ76 1288 aa23.62■■□□□ 1.37
SNF8-216ENST00000573795 MTMR12Q9C0I1 747 aa23.62■■□□□ 1.37
SNF8-216ENST00000573795 PCIF1Q9H4Z3 704 aa23.62■■□□□ 1.37
SNF8-216ENST00000573795 POLR3BQ9NW08 1133 aaPredicted RBP23.62■■□□□ 1.37
SNF8-216ENST00000573795 GTF3C4Q9UKN8 822 aa23.62■■□□□ 1.37
SNF8-216ENST00000573795 PCDHB13Q9Y5F0 798 aa23.62■■□□□ 1.37
SNF8-216ENST00000573795 MORC2Q9Y6X9 1032 aaPredicted RBP23.62■■□□□ 1.37
SNF8-216ENST00000573795 PTPRDP23468 1912 aa23.62■■□□□ 1.37
SNF8-216ENST00000573795 HELZP42694 1942 aaKnown RBP23.62■■□□□ 1.37
SNF8-216ENST00000573795 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.61■■□□□ 1.37
SNF8-216ENST00000573795 GABRDO14764 452 aa23.61■■□□□ 1.37
SNF8-216ENST00000573795 HUS1O60921 280 aa23.61■■□□□ 1.37
SNF8-216ENST00000573795 EGFP01133 1207 aa23.61■■□□□ 1.37
SNF8-216ENST00000573795 IDEP14735 1019 aa23.61■■□□□ 1.37
SNF8-216ENST00000573795 PDCP20941 246 aa23.61■■□□□ 1.37
SNF8-216ENST00000573795 SYT1P21579 422 aa23.61■■□□□ 1.37
SNF8-216ENST00000573795 TXLNAP40222 546 aa23.61■■□□□ 1.37
SNF8-216ENST00000573795 PXNP49023 591 aaPredicted RBP23.61■■□□□ 1.37
SNF8-216ENST00000573795 CSGALNACT2Q8N6G5 542 aa23.61■■□□□ 1.37
SNF8-216ENST00000573795 GLIS3Q8NEA6 775 aa23.61■■□□□ 1.37
SNF8-216ENST00000573795 CACTINQ8WUQ7 758 aaKnown RBP23.61■■□□□ 1.37
SNF8-216ENST00000573795 MYRFLQ96LU7 910 aa23.61■■□□□ 1.37
SNF8-216ENST00000573795 USP28Q96RU2 1077 aa23.61■■□□□ 1.37
SNF8-216ENST00000573795 SLC22A12Q96S37 553 aa23.61■■□□□ 1.37
SNF8-216ENST00000573795 PANK2Q9BZ23 570 aa23.61■■□□□ 1.37
SNF8-216ENST00000573795 SNX9Q9Y5X1 595 aa23.61■■□□□ 1.37
SNF8-216ENST00000573795 TULP1O00294 542 aaPredicted RBP23.6■■□□□ 1.37
SNF8-216ENST00000573795 PRPF6O94906 941 aaKnown RBP23.6■■□□□ 1.37
SNF8-216ENST00000573795 STAT6P42226 847 aa23.6■■□□□ 1.37
SNF8-216ENST00000573795 RPL10AP62906 217 aaKnown RBP23.6■■□□□ 1.37
SNF8-216ENST00000573795 MYL7Q01449 175 aa23.6■■□□□ 1.37
SNF8-216ENST00000573795 ALCAMQ13740 583 aa23.6■■□□□ 1.37
SNF8-216ENST00000573795 ZNF77Q15935 545 aa23.6■■□□□ 1.37
SNF8-216ENST00000573795 SOWAHAQ2M3V2 549 aa23.6■■□□□ 1.37
SNF8-216ENST00000573795 CFAP221Q4G0U5 840 aa23.6■■□□□ 1.37
SNF8-216ENST00000573795 LMBRD2Q68DH5 695 aaPredicted RBP23.6■■□□□ 1.37
SNF8-216ENST00000573795 CCDC73Q6ZRK6 1079 aa23.6■■□□□ 1.37
SNF8-216ENST00000573795 CEP68Q76N32 757 aa23.6■■□□□ 1.37
SNF8-216ENST00000573795 LIMS2Q7Z4I7 341 aa23.6■■□□□ 1.37
SNF8-216ENST00000573795 ADGRF2Q8IZF7 708 aa23.6■■□□□ 1.37
SNF8-216ENST00000573795 SYCP3Q8IZU3 236 aa23.6■■□□□ 1.37
SNF8-216ENST00000573795 TOP6BLQ8N6T0 577 aa23.6■■□□□ 1.37
SNF8-216ENST00000573795 SPATA18Q8TC71 538 aa23.6■■□□□ 1.37
SNF8-216ENST00000573795 PANK4Q9NVE7 773 aa23.6■■□□□ 1.37
SNF8-216ENST00000573795 LAMA1P25391 3075 aa23.6■■□□□ 1.37
SNF8-216ENST00000573795 CACNA1BQ00975 2339 aa23.59■■□□□ 1.37
SNF8-216ENST00000573795 RNF40O75150 1001 aa23.59■■□□□ 1.37
SNF8-216ENST00000573795 KRT19P08727 400 aa23.59■■□□□ 1.37
SNF8-216ENST00000573795 GRSF1Q12849 480 aaKnown RBP eCLIP23.59■■□□□ 1.371e-7■■■□□ 16.4
SNF8-216ENST00000573795 USP4Q13107 963 aa23.59■■□□□ 1.37
SNF8-216ENST00000573795 MTF1Q14872 753 aa23.59■■□□□ 1.37
SNF8-216ENST00000573795 OR5B17Q8NGF7 314 aa23.59■■□□□ 1.37
SNF8-216ENST00000573795 KBTBD7Q8WVZ9 684 aa23.59■■□□□ 1.37
SNF8-216ENST00000573795 GAB3Q8WWW8 586 aa23.59■■□□□ 1.37
SNF8-216ENST00000573795 EZH1Q92800 747 aaPredicted RBP23.59■■□□□ 1.37
SNF8-216ENST00000573795 UXTQ9UBK9 157 aaPredicted RBP23.59■■□□□ 1.37
SNF8-216ENST00000573795 CCDC163A0A0D9SF12 145 aa23.58■■□□□ 1.37
SNF8-216ENST00000573795 GJA4P35212 333 aa23.58■■□□□ 1.37
SNF8-216ENST00000573795 GALK1P51570 392 aa23.58■■□□□ 1.37
SNF8-216ENST00000573795 RBP5P82980 135 aa23.58■■□□□ 1.37
SNF8-216ENST00000573795 FAM160A1Q05DH4 1040 aa23.58■■□□□ 1.37
SNF8-216ENST00000573795 SLC39A14Q15043 492 aa23.58■■□□□ 1.37
SNF8-216ENST00000573795 PDGFRLQ15198 375 aa23.58■■□□□ 1.37
SNF8-216ENST00000573795 FAM171BQ6P995 826 aa23.58■■□□□ 1.37
SNF8-216ENST00000573795 GPD1LQ8N335 351 aa23.58■■□□□ 1.37
SNF8-216ENST00000573795 HPS3Q969F9 1004 aa23.58■■□□□ 1.37
SNF8-216ENST00000573795 CYP2S1Q96SQ9 504 aa23.58■■□□□ 1.37
SNF8-216ENST00000573795 INTS13Q9NVM9 706 aa23.58■■□□□ 1.37
SNF8-216ENST00000573795 GCNT4Q9P109 453 aa23.58■■□□□ 1.37
SNF8-216ENST00000573795 MTMR6Q9Y217 621 aa23.58■■□□□ 1.37
SNF8-216ENST00000573795 CHD8Q9HCK8 2581 aa23.57■■□□□ 1.36
SNF8-216ENST00000573795 ATP2C2O75185 946 aa23.57■■□□□ 1.36
SNF8-216ENST00000573795 ADRB1P08588 477 aa23.57■■□□□ 1.36
SNF8-216ENST00000573795 TMEM191BP0C7N4 346 aa23.57■■□□□ 1.36
SNF8-216ENST00000573795 HOXD13P35453 343 aa23.57■■□□□ 1.36
SNF8-216ENST00000573795 LHX1P48742 406 aa23.57■■□□□ 1.36
SNF8-216ENST00000573795 NOC3LQ8WTT2 800 aaKnown RBP23.57■■□□□ 1.36
SNF8-216ENST00000573795 FUBP3Q96I24 572 aaKnown RBP eCLIP23.57■■□□□ 1.36
SNF8-216ENST00000573795 TMEM206Q9H813 350 aa23.57■■□□□ 1.36
SNF8-216ENST00000573795 ECT2Q9H8V3 914 aa23.57■■□□□ 1.36
SNF8-216ENST00000573795 TRPC7Q9HCX4 862 aa23.57■■□□□ 1.36
SNF8-216ENST00000573795 C2orf78A6NCI8 922 aa23.56■■□□□ 1.36
SNF8-216ENST00000573795 RPP40O75818 363 aaKnown RBP23.56■■□□□ 1.36
SNF8-216ENST00000573795 LMO2P25791 158 aa23.56■■□□□ 1.36
SNF8-216ENST00000573795 PCSK1P29120 753 aa23.56■■□□□ 1.36
SNF8-216ENST00000573795 RAP1GAPP47736 663 aa23.56■■□□□ 1.36
SNF8-216ENST00000573795 PPM1JQ5JR12 505 aa23.56■■□□□ 1.36
SNF8-216ENST00000573795 CC2D1AQ6P1N0 951 aaPredicted RBP23.56■■□□□ 1.36
SNF8-216ENST00000573795 KBTBD6Q86V97 674 aa23.56■■□□□ 1.36
SNF8-216ENST00000573795 CBWD2Q8IUF1 395 aa23.56■■□□□ 1.36
SNF8-216ENST00000573795 SPATA2LQ8IUW3 424 aaPredicted RBP23.56■■□□□ 1.36
SNF8-216ENST00000573795 PDILTQ8N807 584 aa23.56■■□□□ 1.36
SNF8-216ENST00000573795 OSCP1Q8WVF1 389 aa23.56■■□□□ 1.36
SNF8-216ENST00000573795 P2RY13Q9BPV8 354 aa23.56■■□□□ 1.36
SNF8-216ENST00000573795 CRTAC1Q9NQ79 661 aa23.56■■□□□ 1.36
SNF8-216ENST00000573795 WNT6Q9Y6F9 365 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms