RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 CCDC127Q96BQ5 260 aa13.26□□□□□ -0.29
CTDNEP1-205ENST00000570828 SPATA32Q96LK8 384 aa13.26□□□□□ -0.29
CTDNEP1-205ENST00000570828 CGRRF1Q99675 332 aa13.26□□□□□ -0.29
CTDNEP1-205ENST00000570828 TASP1Q9H6P5 420 aa13.26□□□□□ -0.29
CTDNEP1-205ENST00000570828 ABCB6Q9NP58 842 aa13.26□□□□□ -0.29
CTDNEP1-205ENST00000570828 TMLHEQ9NVH6 421 aa13.26□□□□□ -0.29
CTDNEP1-205ENST00000570828 SERTAD1Q9UHV2 236 aa13.26□□□□□ -0.29
CTDNEP1-205ENST00000570828 ZMYM5Q9UJ78 669 aa13.26□□□□□ -0.29
CTDNEP1-205ENST00000570828 PIAS3Q9Y6X2 628 aa13.26□□□□□ -0.29
CTDNEP1-205ENST00000570828 DMDP11532 3685 aa13.26□□□□□ -0.29
CTDNEP1-205ENST00000570828 SCN1AP35498 2009 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 ANK1P16157 1881 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 CFAP54Q96N23 3096 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 LAMTOR5O43504 91 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 ACTN4O43707 911 aaKnown RBP13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 PFKFB1P16118 471 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 CMA1P23946 247 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 RPL10AP62906 217 aaKnown RBP13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 FCHO2Q0JRZ9 810 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 PSMD6Q15008 389 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 LAPTM4AQ15012 233 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 KNOP1Q1ED39 458 aaKnown RBP13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 SOWAHAQ2M3V2 549 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 SCARA3Q6AZY7 606 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 DPH6Q7L8W6 267 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 TRAPPC11Q7Z392 1133 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 OSTM1Q86WC4 334 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 SPATA2LQ8IUW3 424 aaPredicted RBP13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 C12orf56Q8IXR9 622 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 CSGALNACT1Q8TDX6 532 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 RSPRY1Q96DX4 576 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 PAGE5Q96GU1 130 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 MMS19Q96T76 1030 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 MKNK1Q9BUB5 465 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 IL21Q9HBE4 155 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 USP25Q9UHP3 1055 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 GTF3C4Q9UKN8 822 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 NDRG2Q9UN36 371 aaKnown RBP13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 PCDHGA10Q9Y5H3 936 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 ATP6V1DQ9Y5K8 247 aa13.25□□□□□ -0.29
CTDNEP1-205ENST00000570828 COL4A3Q01955 1670 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 A0A1B0GVL5 298 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 GABRDO14764 452 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 CHADO15335 359 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 EXOC3O60645 756 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 PRAMEF12O95522 483 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 MYL1P05976 194 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 SP9P0CG40 484 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 CSH1P0DML2 217 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 CSH2P0DML3 217 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 DDX6P26196 483 aaKnown RBP eCLIP13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 RPS9P46781 194 aaKnown RBP13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 GPR15P49685 360 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 CFAP221Q4G0U5 840 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 ARHGAP29Q52LW3 1261 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 C1orf228Q6PIY5 440 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 C4orf50Q6ZRC1 276 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 GPIHBP1Q8IV16 184 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 FAM3CQ92520 227 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 MRPS31Q92665 395 aaKnown RBP13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 CLDN23Q96B33 292 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 MSANTD3Q96H12 275 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 FUBP3Q96I24 572 aaKnown RBP eCLIP13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 PKMYT1Q99640 499 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 SYT15Q9BQS2 421 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 SEMA4AQ9H3S1 761 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 OBP2AQ9NY56 170 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 UXTQ9UBK9 157 aaPredicted RBP13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 MAGED2Q9UNF1 606 aaPredicted RBP13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 R4GN57 208 aa13.24□□□□□ -0.29
CTDNEP1-205ENST00000570828 ARNTLO00327 626 aa13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 HCRTO43612 131 aa13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 CLSTN1O94985 981 aa13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 HMGA1P17096 107 aaKnown RBP13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 CYP2F1P24903 491 aa13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 WEE1P30291 646 aa13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 AVPR1AP37288 418 aa13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 KPNA1P52294 538 aaPredicted RBP13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 NLRP12P59046 1061 aa13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 PSMC1P62191 440 aaKnown RBP13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 TNNC1P63316 161 aa13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 PSMD2Q13200 908 aa13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 TRPC3Q13507 836 aa13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 MAPRE1Q15691 268 aaKnown RBP13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 DDR2Q16832 855 aa13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 CCDC142Q17RM4 750 aa13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 KMT5BQ4FZB7 885 aa13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 SDHAF4Q5VUM1 108 aa13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 SCN4BQ8IWT1 228 aa13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 CMTM8Q8IZV2 173 aa13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 STKLD1Q8NE28 680 aa13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 BPIFB1Q8TDL5 484 aa13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 KBTBD7Q8WVZ9 684 aa13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 ZFRQ96KR1 1074 aaKnown RBP13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 C8orf33Q9H7E9 229 aaPredicted RBP13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 THG1LQ9NWX6 298 aaKnown RBP13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 FBXO4Q9UKT5 387 aa13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 CDH9Q9ULB4 789 aa13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 ZDHHC9Q9Y397 364 aa13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 RIF1Q5UIP0 2472 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms