RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 CEP76Q8TAP6 659 aa11.31□□□□□ -0.6
CTDNEP1-202ENST00000570380 WHAMMQ8TF30 809 aa11.31□□□□□ -0.6
CTDNEP1-202ENST00000570380 MRPS31Q92665 395 aaKnown RBP11.31□□□□□ -0.6
CTDNEP1-202ENST00000570380 ATP2A3Q93084 1043 aa11.31□□□□□ -0.6
CTDNEP1-202ENST00000570380 SLC22A12Q96S37 553 aa11.31□□□□□ -0.6
CTDNEP1-202ENST00000570380 LINC00597Q9H2U6 94 aa11.31□□□□□ -0.6
CTDNEP1-202ENST00000570380 PLEKHA5Q9HAU0 1116 aa11.31□□□□□ -0.6
CTDNEP1-202ENST00000570380 KMT5AQ9NQR1 393 aa11.31□□□□□ -0.6
CTDNEP1-202ENST00000570380 DNAAF2Q9NVR5 837 aaKnown RBP11.31□□□□□ -0.6
CTDNEP1-202ENST00000570380 UBQLN1Q9UMX0 589 aaKnown RBP11.31□□□□□ -0.6
CTDNEP1-202ENST00000570380 BTBD18B2RXH4 712 aa11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 SGK1O00141 431 aa11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 ARHGAP33O14559 1287 aa11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 TADA3O75528 432 aa11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 TOM1L1O75674 476 aa11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 GJB3O75712 270 aa11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 CDKL5O76039 1030 aa11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 CHRM1P11229 460 aaPredicted RBP11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 ODC1P11926 461 aa11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 GPR15P49685 360 aa11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 MRPS21P82921 87 aaKnown RBP11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 USP4Q13107 963 aa11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 NR1H3Q13133 447 aa11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 NBR1Q14596 966 aa11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 GAB4Q2WGN9 574 aa11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 LMBRD2Q68DH5 695 aaPredicted RBP11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 SLCO6A1Q86UG4 719 aa11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 SFTPA1Q8IWL2 248 aa11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 EFCAB13Q8IY85 973 aa11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 DEFB119Q8N690 84 aa11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 ALLCQ8N6M5 410 aa11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 TXNDC5Q8NBS9 432 aaKnown RBP11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 CYP2S1Q96SQ9 504 aa11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 HAPLN2Q9GZV7 340 aa11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 DKK4Q9UBT3 224 aa11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 MAGED2Q9UNF1 606 aaPredicted RBP11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 PCDHB9Q9Y5E1 797 aa11.3□□□□□ -0.6
CTDNEP1-202ENST00000570380 LACTBL1A8MY62 500 aa11.29□□□□□ -0.6
CTDNEP1-202ENST00000570380 SLC16A4O15374 487 aa11.29□□□□□ -0.6
CTDNEP1-202ENST00000570380 HIP1RO75146 1068 aa11.29□□□□□ -0.6
CTDNEP1-202ENST00000570380 CTDNEP1O95476 244 aa11.29□□□□□ -0.6
CTDNEP1-202ENST00000570380 KLF8O95600 359 aaPredicted RBP11.29□□□□□ -0.6
CTDNEP1-202ENST00000570380 CYP11A1P05108 521 aa11.29□□□□□ -0.6
CTDNEP1-202ENST00000570380 MCM7P33993 719 aa11.29□□□□□ -0.6
CTDNEP1-202ENST00000570380 TNFSF9P41273 254 aa11.29□□□□□ -0.6
CTDNEP1-202ENST00000570380 IL17RCQ8NAC3 791 aa11.29□□□□□ -0.6
CTDNEP1-202ENST00000570380 ERMNQ8TAM6 284 aa11.29□□□□□ -0.6
CTDNEP1-202ENST00000570380 SPPL2BQ8TCT7 592 aa11.29□□□□□ -0.6
CTDNEP1-202ENST00000570380 C2orf15Q8WU43 125 aaKnown RBP11.29□□□□□ -0.6
CTDNEP1-202ENST00000570380 HMGB4Q8WW32 186 aa11.29□□□□□ -0.6
CTDNEP1-202ENST00000570380 UBL7Q96S82 380 aaPredicted RBP11.29□□□□□ -0.6
CTDNEP1-202ENST00000570380 BRMS1Q9HCU9 246 aa11.29□□□□□ -0.6
CTDNEP1-202ENST00000570380 POLMQ9NP87 494 aaPredicted RBP11.29□□□□□ -0.6
CTDNEP1-202ENST00000570380 ABI2Q9NYB9 513 aaPredicted RBP11.29□□□□□ -0.6
CTDNEP1-202ENST00000570380 BCCIPQ9P287 314 aaKnown RBP eCLIP11.29□□□□□ -0.6
CTDNEP1-202ENST00000570380 ORC3Q9UBD5 711 aaPredicted RBP11.29□□□□□ -0.6
CTDNEP1-202ENST00000570380 RBM19Q9Y4C8 960 aaKnown RBP11.29□□□□□ -0.6
CTDNEP1-202ENST00000570380 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.29□□□□□ -0.6
CTDNEP1-202ENST00000570380 CYP46A1Q9Y6A2 500 aa11.29□□□□□ -0.6
CTDNEP1-202ENST00000570380 CLDN3O15551 220 aa11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 ADAM23O75077 832 aa11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 SYPP08247 313 aa11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 CLTAP09496 248 aa11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 FDPSP14324 419 aaKnown RBP11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 PLA2G2AP14555 144 aa11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 MUTP22033 750 aa11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 TIE1P35590 1138 aa11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 RPL6Q02878 288 aaKnown RBP11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 ZNF33AQ06730 810 aa11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 MCL1Q07820 350 aa11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 MESP2Q0VG99 397 aa11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 MAPK7Q13164 816 aa11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 SLC14A1Q13336 389 aa11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 BYSLQ13895 437 aaKnown RBP11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 ZC2HC1CQ53FD0 456 aaPredicted RBP11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 EMC10Q5UCC4 262 aa11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 SDHAF4Q5VUM1 108 aa11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 SPATA1Q5VX52 437 aa11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 TOGARAM2Q6ZUX3 1019 aa11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 NAXDQ8IW45 347 aa11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 LRRC15Q8TF66 581 aa11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 SLC39A7Q92504 469 aa11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 TMEM206Q9H813 350 aa11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 TRPC7Q9HCX4 862 aa11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 ZDHHC4Q9NPG8 344 aa11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 KIAA1024Q9UPX6 916 aa11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 APOBEC2Q9Y235 224 aaKnown RBP11.28□□□□□ -0.6
CTDNEP1-202ENST00000570380 CFAP46Q8IYW2 2715 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 A0A087WV48 116 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 TRAV19A0A0A6YYK7 116 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 SFI1A8K8P3 1242 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 TK2O00142 265 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 PIRO00625 290 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 AP5Z1O43299 807 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 XPOTO43592 962 aaKnown RBP11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 CBFA2T3O75081 653 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 CKMP06732 381 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 USP17L7P0C7H9 530 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 CSH1P0DML2 217 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 CSH2P0DML3 217 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms