RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 TXLNBQ8N3L3 684 aa16.34■□□□□ 0.21
HERPUD1-219ENST00000570273 UBA3Q8TBC4 463 aa16.34■□□□□ 0.21
HERPUD1-219ENST00000570273 PKMYT1Q99640 499 aa16.34■□□□□ 0.21
HERPUD1-219ENST00000570273 HNRNPABQ99729 332 aaKnown RBP16.34■□□□□ 0.21
HERPUD1-219ENST00000570273 C17orf80Q9BSJ5 609 aa16.34■□□□□ 0.21
HERPUD1-219ENST00000570273 B3GNT5Q9BYG0 378 aa16.34■□□□□ 0.21
HERPUD1-219ENST00000570273 CHST7Q9NS84 486 aa16.34■□□□□ 0.21
HERPUD1-219ENST00000570273 GTF3C4Q9UKN8 822 aa16.34■□□□□ 0.21
HERPUD1-219ENST00000570273 YBX2Q9Y2T7 364 aaKnown RBP16.34■□□□□ 0.21
HERPUD1-219ENST00000570273 CLDN5O00501 218 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 ZSCAN12O43309 604 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 RTN2O75298 545 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 H2AFZP0C0S5 128 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 GZMAP12544 262 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 UNGP13051 313 aaPredicted RBP16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 CPB1P15086 417 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 CDR1P51861 262 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 VAV2P52735 878 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 BCAT1P54687 386 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 ARPP19P56211 112 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 DSG1Q02413 1049 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 CENPCQ03188 943 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 SLC39A12Q504Y0 691 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 ACAD10Q6JQN1 1059 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 PPP1R2P3Q6NXS1 205 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 FAM171BQ6P995 826 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 H2AFVQ71UI9 128 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 TTC30AQ86WT1 665 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 DNAAF5Q86Y56 855 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 FUKQ8N0W3 1084 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 C17orf53Q8N3J3 647 aaPredicted RBP16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 KIAA1524Q8TCG1 905 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 CPA5Q8WXQ8 436 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 SECISBP2LQ93073 1101 aaKnown RBP16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 PCED1BQ96HM7 432 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 PLVAPQ9BX97 442 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 PACSIN1Q9BY11 444 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 OXCT2Q9BYC2 517 aaPredicted RBP16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 ZNF518BQ9C0D4 1074 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 LHX5Q9H2C1 402 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 KRT82Q9NSB4 513 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 TMLHEQ9NVH6 421 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 MTRRQ9UBK8 725 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 MTUS1Q9ULD2 1270 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 VWA8A3KMH1 1905 aa16.33■□□□□ 0.2
HERPUD1-219ENST00000570273 TRIOBPQ9H2D6 2365 aa16.32■□□□□ 0.2
HERPUD1-219ENST00000570273 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.32■□□□□ 0.2
HERPUD1-219ENST00000570273 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.32■□□□□ 0.2
HERPUD1-219ENST00000570273 CCP110O43303 1012 aa16.32■□□□□ 0.2
HERPUD1-219ENST00000570273 FTLP02792 175 aaPredicted RBP16.32■□□□□ 0.2
HERPUD1-219ENST00000570273 FAM200BP0CF97 657 aa16.32■□□□□ 0.2
HERPUD1-219ENST00000570273 SETSIPP0DME0 302 aa16.32■□□□□ 0.2
HERPUD1-219ENST00000570273 DNAJB2P25686 324 aa16.32■□□□□ 0.2
HERPUD1-219ENST00000570273 CDH5P33151 784 aaPredicted RBP16.32■□□□□ 0.2
HERPUD1-219ENST00000570273 BST2Q10589 180 aaKnown RBP16.32■□□□□ 0.2
HERPUD1-219ENST00000570273 RAB30Q15771 203 aa16.32■□□□□ 0.2
HERPUD1-219ENST00000570273 C4orf50Q6ZRC1 276 aa16.32■□□□□ 0.2
HERPUD1-219ENST00000570273 LRRTM3Q86VH5 581 aa16.32■□□□□ 0.2
HERPUD1-219ENST00000570273 SPATA2LQ8IUW3 424 aaPredicted RBP16.32■□□□□ 0.2
HERPUD1-219ENST00000570273 CCAR2Q8N163 923 aaKnown RBP16.32■□□□□ 0.2
HERPUD1-219ENST00000570273 ANKRD52Q8NB46 1076 aa16.32■□□□□ 0.2
HERPUD1-219ENST00000570273 SAMD11Q96NU1 681 aa16.32■□□□□ 0.2
HERPUD1-219ENST00000570273 NOX5Q96PH1 765 aa16.32■□□□□ 0.2
HERPUD1-219ENST00000570273 TGS1Q96RS0 853 aaKnown RBP16.32■□□□□ 0.2
HERPUD1-219ENST00000570273 ISCUQ9H1K1 167 aa16.32■□□□□ 0.2
HERPUD1-219ENST00000570273 TRMT1Q9NXH9 659 aaKnown RBP16.32■□□□□ 0.2
HERPUD1-219ENST00000570273 MSRAQ9UJ68 235 aa16.32■□□□□ 0.2
HERPUD1-219ENST00000570273 BACE2Q9Y5Z0 518 aa16.32■□□□□ 0.2
HERPUD1-219ENST00000570273 TBC1D4O60343 1298 aa16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 AP1G2O75843 785 aa16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 RPL17P18621 184 aaKnown RBP16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 ABCB4P21439 1286 aa16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 MSNP26038 577 aaKnown RBP16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 CA8P35219 290 aa16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 PBX2P40425 430 aa16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 SLC8A3P57103 927 aa16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 NFE2Q16621 373 aaPredicted RBP16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 PKDCCQ504Y2 493 aa16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 MMS22LQ6ZRQ5 1243 aa16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 PAQR9Q6ZVX9 377 aa16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 SPRED2Q7Z698 418 aa16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 TDHQ8IZJ6 230 aa16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 MSANTD4Q8NCY6 345 aa16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 SMARCD1Q96GM5 515 aa16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 C11orf70Q9BRQ4 267 aa16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 C11orf84Q9BUA3 381 aaPredicted RBP16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 PBX4Q9BYU1 374 aa16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 ZBP1Q9H171 429 aa16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 NKX2-4Q9H2Z4 354 aa16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 TFR2Q9UP52 801 aa16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 LZTS1Q9Y250 596 aa16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 CDY1Q9Y6F8 540 aa16.31■□□□□ 0.2
HERPUD1-219ENST00000570273 A0A0U1RQJ8 604 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 USP27XA6NNY8 438 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 NPR3P17342 541 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 GPD2P43304 727 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 GALCP54803 685 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 TAP1Q03518 808 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 PDE4CQ08493 712 aa16.3■□□□□ 0.2
HERPUD1-219ENST00000570273 PDCLQ13371 301 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms