RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 TSPY2A6NKD2 308 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 ISM1B1AKI9 464 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 PRRT4C9JH25 899 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 F8W031 263 aaPredicted RBP7.95□□□□□ -1.14
CNOT1-222ENST00000570139 PSMD14O00487 310 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 NFIBO00712 420 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 ADAMTS3O15072 1205 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 ZBTB43O43298 467 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 PDIA3P30101 505 aaKnown RBP7.95□□□□□ -1.14
CNOT1-222ENST00000570139 MC4RP32245 332 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 CHRNA4P43681 627 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 METAP2P50579 478 aaKnown RBP eCLIP7.95□□□□□ -1.14
CNOT1-222ENST00000570139 RBM5P52756 815 aaKnown RBP eCLIP7.95□□□□□ -1.14
CNOT1-222ENST00000570139 HK3P52790 923 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 MAPK10P53779 464 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 DSC2Q02487 901 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 ZNF543Q08ER8 600 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 NOGQ13253 232 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 NOLC1Q14978 699 aaKnown RBP eCLIP7.95□□□□□ -1.14
CNOT1-222ENST00000570139 DLGAP5Q15398 846 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 SLC4A8Q2Y0W8 1093 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 JAKMIP3Q5VZ66 844 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 CD276Q5ZPR3 534 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 CDC42EP5Q6NZY7 148 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 NFXL1Q6ZNB6 911 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 CLEC17AQ6ZS10 378 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 TMC6Q7Z403 805 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 MAPKAPK5Q8IW41 473 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 CCDC83Q8IWF9 413 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 ZNF444Q8N0Y2 327 aaPredicted RBP7.95□□□□□ -1.14
CNOT1-222ENST00000570139 C3orf20Q8ND61 904 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 WDR48Q8TAF3 677 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 SMARCC2Q8TAQ2 1214 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 IGDCC4Q8TDY8 1250 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 NSUN6Q8TEA1 469 aaKnown RBP7.95□□□□□ -1.14
CNOT1-222ENST00000570139 DPF2Q92785 391 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 PLCD4Q9BRC7 762 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 COLEC11Q9BWP8 271 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 LY9Q9HBG7 655 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 TCP11L1Q9NUJ3 509 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 RBM28Q9NW13 759 aaKnown RBP7.95□□□□□ -1.14
CNOT1-222ENST00000570139 DTLQ9NZJ0 730 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 HSPBP1Q9NZL4 362 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 KCMF1Q9P0J7 381 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 OGDHLQ9ULD0 1010 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 PCDHGB3Q9Y5G1 929 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 GREB1LQ9C091 1923 aaPredicted RBP7.94□□□□□ -1.14
CNOT1-222ENST00000570139 A0A0A6YYJ9 748 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 POM121BA6NF01 834 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 CPLX1O14810 134 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 NCK2O43639 380 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 RANBP6O60518 1105 aaKnown RBP7.94□□□□□ -1.14
CNOT1-222ENST00000570139 MPIG6BO95866 241 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 CYBBP04839 570 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 TSPY3P0CV98 308 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 TSPY8P0CW00 308 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 FUT4P22083 530 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 APEX1P27695 318 aaKnown RBP7.94□□□□□ -1.14
CNOT1-222ENST00000570139 GJB2P29033 226 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 GATA4P43694 442 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 CXCL9Q07325 125 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 NFATC3Q12968 1075 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 TNFAIP1Q13829 316 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 CCDC38Q502W7 563 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 RALGPS1Q5JS13 557 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 CYB5R4Q7L1T6 521 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 FAM83AQ86UY5 434 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 MYCT1Q8N699 235 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 FAM184AQ8NB25 1140 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 WASF1Q92558 559 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 SLC35A4Q96G79 324 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 TMEM41AQ96HV5 264 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 MPP4Q96JB8 637 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 TCEANC2Q96MN5 208 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 ZMAT3Q9HA38 289 aaKnown RBP7.94□□□□□ -1.14
CNOT1-222ENST00000570139 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.94□□□□□ -1.14
CNOT1-222ENST00000570139 HERC5Q9UII4 1024 aaKnown RBP7.94□□□□□ -1.14
CNOT1-222ENST00000570139 DBR1Q9UK59 544 aaKnown RBP7.94□□□□□ -1.14
CNOT1-222ENST00000570139 MAGED2Q9UNF1 606 aaPredicted RBP7.94□□□□□ -1.14
CNOT1-222ENST00000570139 STK36Q9NRP7 1315 aa7.94□□□□□ -1.14
CNOT1-222ENST00000570139 H3BUI4 141 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 STX6O43752 255 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 CUTAO60888 179 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 ADAM23O75077 832 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 RAD17O75943 681 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 FGF18O76093 207 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 LARGE1O95461 756 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 KIF5BP33176 963 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 PPFIA1Q13136 1202 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 STARD3Q14849 445 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 PAQR3Q6TCH7 311 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 GAREM2Q75VX8 874 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 BMP8AQ7Z5Y6 402 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 CD163Q86VB7 1156 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 PPHLN1Q8NEY8 458 aaKnown RBP7.93□□□□□ -1.14
CNOT1-222ENST00000570139 UBE2Q2Q8WVN8 375 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 ANKS1AQ92625 1134 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 TOE1Q96GM8 510 aaKnown RBP7.93□□□□□ -1.14
CNOT1-222ENST00000570139 CCDC17Q96LX7 622 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 LRRC2Q9BYS8 371 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms