RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 LHX1P48742 406 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 FMO5P49326 533 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 MXI1P50539 228 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 EPHB3P54753 998 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 NOP14P78316 857 aaKnown RBP10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 MYL7Q01449 175 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 TSPY1Q01534 308 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 PTPN21Q16825 1174 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 CCDC40Q4G0X9 1142 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 KRT39Q6A163 491 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 RRAGAQ7L523 313 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 DPH6Q7L8W6 267 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 OTOP3Q7RTS5 596 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 FRMD5Q7Z6J6 570 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 DCP1BQ8IZD4 617 aaKnown RBP10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 FUKQ8N0W3 1084 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 ZMIZ2Q8NF64 920 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 SCAMP5Q8TAC9 235 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 MYCBPAPQ8TBZ2 947 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 FAM200AQ8TCP9 573 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 CEP63Q96MT8 703 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 SLC22A12Q96S37 553 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 CYP2S1Q96SQ9 504 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 ZSWIM1Q9BR11 485 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 EPS15L1Q9UBC2 864 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 CDH9Q9ULB4 789 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 R3HCC1Q9Y3T6 440 aaKnown RBP10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 NUMBLQ9Y6R0 609 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 DOCK8Q8NF50 2099 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 FAM170AA1A519 330 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 F8VP50 259 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 F11P03951 625 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 PAX3P23760 479 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 GABRR2P28476 465 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 ADORA2BP29275 332 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 AP3M2P53677 418 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 EPHA5P54756 1037 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 GPC5P78333 572 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 KCNH2Q12809 1159 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 STIM1Q13586 685 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 GRM2Q14416 872 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 TXNDC8Q6A555 127 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 DPY19L2P1Q6NXN4 242 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 RBM43Q6ZSC3 357 aaKnown RBP10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 HFE2Q6ZVN8 426 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 GPRIN1Q7Z2K8 1008 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 SPATA2LQ8IUW3 424 aaPredicted RBP10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 TRIML1Q8N9V2 468 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 MLKLQ8NB16 471 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 B3GALNT2Q8NCR0 500 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 FBXL13Q8NEE6 735 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 NDRG1Q92597 394 aaKnown RBP10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 EDAQ92838 391 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 PSMG2Q969U7 264 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 JAKMIP2Q96AA8 810 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 ASIC4Q96FT7 647 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 CNOT6LQ96LI5 555 aaKnown RBP10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 KREMEN1Q96MU8 473 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 SMOQ99835 787 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 LRFN3Q9BTN0 628 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 SLC46A2Q9BY10 475 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 ACP6Q9NPH0 428 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 MAGEC2Q9UBF1 373 aaPredicted RBP10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 USTQ9Y2C2 406 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 COQ4Q9Y3A0 265 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 NR2E1Q9Y466 385 aa10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.46□□□□□ -0.73
GTF3C1-212ENST00000570129 KRBA1A5PL33 1030 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 TULP2O00295 520 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 SCAMP3O14828 347 aaKnown RBP10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 CILPO75339 1184 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 GABBR2O75899 941 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 PRAMEF12O95522 483 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 CFHP08603 1231 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 POU2F2P09086 479 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 SLC9A1P19634 815 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 ACO1P21399 889 aaKnown RBP10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 PCSK1P29120 753 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 GTF2H1P32780 548 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 GRIK1P39086 918 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 RAD23BP54727 409 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 IFRD2Q12894 506 aaPredicted RBP10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 PHLDB3Q6NSJ2 640 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 CAVIN1Q6NZI2 390 aaKnown RBP10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 CYP26C1Q6V0L0 522 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 TRIM67Q6ZTA4 783 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 PDZD4Q76G19 769 aaPredicted RBP10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 CRYBG2Q8N1P7 616 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 UBR7Q8N806 425 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 SLC4A11Q8NBS3 891 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 EHBP1Q8NDI1 1231 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 TTC8Q8TAM2 541 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 SPPL2BQ8TCT7 592 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 SLC2A14Q8TDB8 520 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 TFAP2BQ92481 460 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 WBP2Q969T9 261 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 ACSF2Q96CM8 615 aaPredicted RBP10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 NIF3L1Q9GZT8 377 aa10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 INTS2Q9H0H0 1204 aaKnown RBP10.45□□□□□ -0.74
GTF3C1-212ENST00000570129 ATXN3LQ9H3M9 355 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms