RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 GNL1P36915 607 aaPredicted RBP13.92□□□□□ -0.18
CNOT1-220ENST00000569916 PIK3CAP42336 1068 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 MAGEA11P43364 429 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 RAP1GAPP47736 663 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 GCLMP48507 274 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 CDH8P55286 799 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 RPL10AP62906 217 aaKnown RBP13.92□□□□□ -0.18
CNOT1-220ENST00000569916 CYP4F8P98187 520 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 MAPRE1Q15691 268 aaKnown RBP13.92□□□□□ -0.18
CNOT1-220ENST00000569916 DDR2Q16832 855 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 IER5LQ5T953 404 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 ISM2Q6H9L7 571 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 ASTLQ6HA08 431 aaPredicted RBP13.92□□□□□ -0.18
CNOT1-220ENST00000569916 SCARA5Q6ZMJ2 495 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 C4orf50Q6ZRC1 276 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 TMEM150AQ86TG1 271 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 TMEM105Q8N8V8 129 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 FLCNQ8NFG4 579 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 MYCBPAPQ8TBZ2 947 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 TAF4BQ92750 862 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 PCED1BQ96HM7 432 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 SDCBP2Q9H190 292 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 KCNH6Q9H252 994 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 SLITRK6Q9H5Y7 841 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 ZFP14Q9HCL3 533 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 ARHGEF3Q9NR81 526 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 CETN3O15182 167 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 TADA3O75528 432 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 NOL4O94818 638 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 CLSTN1O94985 981 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 F11P03951 625 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 CSH1P0DML2 217 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 CSH2P0DML3 217 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 EPB41P11171 864 aaKnown RBP13.91□□□□□ -0.18
CNOT1-220ENST00000569916 CD44P16070 742 aaKnown RBP13.91□□□□□ -0.18
CNOT1-220ENST00000569916 AOC1P19801 751 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 BMP6P22004 513 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 VIPR2P41587 438 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 CLCN5P51795 746 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 UBE2HP62256 183 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 CYP27A1Q02318 531 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 GRM2Q14416 872 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 TAF12Q16514 161 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 SGSM1Q2NKQ1 1148 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 MDH1BQ5I0G3 518 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 GPR158Q5T848 1215 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 ANKRD40Q6AI12 368 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 SPOPLQ6IQ16 392 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 VITQ6UXI7 678 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 SCN4BQ8IWT1 228 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 PRSS33Q8NF86 280 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 TAS1R2Q8TE23 839 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 RSPRY1Q96DX4 576 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 TSG101Q99816 390 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 TMEM8AQ9HCN3 771 aa13.91□□□□□ -0.18
CNOT1-220ENST00000569916 MAGEC2Q9UBF1 373 aaPredicted RBP13.91□□□□□ -0.18
CNOT1-220ENST00000569916 SLC38A8A6NNN8 435 aa13.9□□□□□ -0.18
CNOT1-220ENST00000569916 A8MXQ7 604 aa13.9□□□□□ -0.18
CNOT1-220ENST00000569916 SLC16A3O15427 465 aaKnown RBP13.9□□□□□ -0.18
CNOT1-220ENST00000569916 PTPN1P18031 435 aaKnown RBP13.9□□□□□ -0.18
CNOT1-220ENST00000569916 BDNFP23560 247 aa13.9□□□□□ -0.18
CNOT1-220ENST00000569916 CCNE1P24864 410 aa13.9□□□□□ -0.18
CNOT1-220ENST00000569916 ASPAP45381 313 aa13.9□□□□□ -0.18
CNOT1-220ENST00000569916 NLRP12P59046 1061 aa13.9□□□□□ -0.18
CNOT1-220ENST00000569916 FKBP3Q00688 224 aaKnown RBP13.9□□□□□ -0.18
CNOT1-220ENST00000569916 PFKPQ01813 784 aa13.9□□□□□ -0.18
CNOT1-220ENST00000569916 LRRC63Q05C16 580 aa13.9□□□□□ -0.18
CNOT1-220ENST00000569916 MORC3Q14149 939 aa13.9□□□□□ -0.18
CNOT1-220ENST00000569916 ARHGAP15Q53QZ3 475 aa13.9□□□□□ -0.18
CNOT1-220ENST00000569916 VSTM1Q6UX27 236 aa13.9□□□□□ -0.18
CNOT1-220ENST00000569916 B3GALNT2Q8NCR0 500 aa13.9□□□□□ -0.18
CNOT1-220ENST00000569916 TRMT2BQ96GJ1 504 aaKnown RBP13.9□□□□□ -0.18
CNOT1-220ENST00000569916 MYRFLQ96LU7 910 aa13.9□□□□□ -0.18
CNOT1-220ENST00000569916 GCNAQ96QF7 691 aa13.9□□□□□ -0.18
CNOT1-220ENST00000569916 MMRN2Q9H8L6 949 aa13.9□□□□□ -0.18
CNOT1-220ENST00000569916 TBC1D17Q9HA65 648 aa13.9□□□□□ -0.18
CNOT1-220ENST00000569916 MAGED2Q9UNF1 606 aaPredicted RBP13.9□□□□□ -0.18
CNOT1-220ENST00000569916 MUC6Q6W4X9 2439 aa13.9□□□□□ -0.18
CNOT1-220ENST00000569916 WDFY4Q6ZS81 3184 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 HEPACAM2A8MVW5 462 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 PSMA7O14818 248 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 PI15O43692 258 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 PRAMEF12O95522 483 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 P4HA1P13674 534 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 PSMC3P17980 439 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 WEE1P30291 646 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 GTF2H1P32780 548 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 PPP1R2P41236 205 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 CACNA2D1P54289 1103 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 NOP14P78316 857 aaKnown RBP13.89□□□□□ -0.19
CNOT1-220ENST00000569916 STIM1Q13586 685 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 MLF2Q15773 248 aaPredicted RBP13.89□□□□□ -0.19
CNOT1-220ENST00000569916 KRT39Q6A163 491 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 PHLDB3Q6NSJ2 640 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 ARID3BQ8IVW6 561 aaPredicted RBP13.89□□□□□ -0.19
CNOT1-220ENST00000569916 DEPDC1BQ8WUY9 529 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 DNASE1L2Q92874 299 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 E2F7Q96AV8 911 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 DHTKD1Q96HY7 919 aaPredicted RBP13.89□□□□□ -0.19
CNOT1-220ENST00000569916 SPATA17Q96L03 361 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms