RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 NELFCDQ8IXH7 590 aa14.86□□□□□ -0.03
GTF3C1-211ENST00000569653 YAF2Q8IY57 180 aa14.86□□□□□ -0.03
GTF3C1-211ENST00000569653 TMEM86AQ8N2M4 240 aa14.86□□□□□ -0.03
GTF3C1-211ENST00000569653 TOP6BLQ8N6T0 577 aa14.86□□□□□ -0.03
GTF3C1-211ENST00000569653 CSGALNACT1Q8TDX6 532 aa14.86□□□□□ -0.03
GTF3C1-211ENST00000569653 CACTINQ8WUQ7 758 aaKnown RBP14.86□□□□□ -0.03
GTF3C1-211ENST00000569653 ZNF516Q92618 1163 aa14.86□□□□□ -0.03
GTF3C1-211ENST00000569653 ZNF396Q96N95 335 aaPredicted RBP14.86□□□□□ -0.03
GTF3C1-211ENST00000569653 TMEM30AQ9NV96 361 aa14.86□□□□□ -0.03
GTF3C1-211ENST00000569653 MAGED2Q9UNF1 606 aaPredicted RBP14.86□□□□□ -0.03
GTF3C1-211ENST00000569653 SMG5Q9UPR3 1016 aaKnown RBP14.86□□□□□ -0.03
GTF3C1-211ENST00000569653 RALGAPA1Q6GYQ0 2036 aa14.86□□□□□ -0.03
GTF3C1-211ENST00000569653 MYOFQ9NZM1 2061 aa14.85□□□□□ -0.03
GTF3C1-211ENST00000569653 EIF3DO15371 548 aaKnown RBP eCLIP14.85□□□□□ -0.03
GTF3C1-211ENST00000569653 POLR2DO15514 142 aaKnown RBP14.85□□□□□ -0.03
GTF3C1-211ENST00000569653 KLRC4O43908 158 aa14.85□□□□□ -0.03
GTF3C1-211ENST00000569653 HUS1O60921 280 aa14.85□□□□□ -0.03
GTF3C1-211ENST00000569653 CST3P01034 146 aaPredicted RBP14.85□□□□□ -0.03
GTF3C1-211ENST00000569653 TMEM191BP0C7N4 346 aa14.85□□□□□ -0.03
GTF3C1-211ENST00000569653 ARSAP15289 507 aa14.85□□□□□ -0.03
GTF3C1-211ENST00000569653 ID4P47928 161 aa14.85□□□□□ -0.03
GTF3C1-211ENST00000569653 KPNA1P52294 538 aaPredicted RBP14.85□□□□□ -0.03
GTF3C1-211ENST00000569653 SRSF5Q13243 272 aaKnown RBP14.85□□□□□ -0.03
GTF3C1-211ENST00000569653 CUL4BQ13620 913 aa14.85□□□□□ -0.03
GTF3C1-211ENST00000569653 NFE2Q16621 373 aaPredicted RBP14.85□□□□□ -0.03
GTF3C1-211ENST00000569653 RESP18Q5W5W9 173 aa14.85□□□□□ -0.03
GTF3C1-211ENST00000569653 MYLPFQ96A32 169 aa14.85□□□□□ -0.03
GTF3C1-211ENST00000569653 HPDLQ96IR7 371 aa14.85□□□□□ -0.03
GTF3C1-211ENST00000569653 MRPL45Q9BRJ2 306 aaKnown RBP14.85□□□□□ -0.03
GTF3C1-211ENST00000569653 CUEDC2Q9H467 287 aa14.85□□□□□ -0.03
GTF3C1-211ENST00000569653 ABCB6Q9NP58 842 aa14.85□□□□□ -0.03
GTF3C1-211ENST00000569653 PARD6AQ9NPB6 346 aa14.85□□□□□ -0.03
GTF3C1-211ENST00000569653 GKN1Q9NS71 199 aa14.85□□□□□ -0.03
GTF3C1-211ENST00000569653 LAMA1P25391 3075 aa14.85□□□□□ -0.03
GTF3C1-211ENST00000569653 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 ZNF233A6NK53 670 aa14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 DPYSL4O14531 572 aa14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 CYP2J2P51589 502 aa14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 CACNA2D1P54289 1103 aa14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 USP46P62068 366 aa14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 CYP24A1Q07973 514 aa14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 SNRNP35Q16560 246 aaKnown RBP14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 LPAL2Q16609 132 aa14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 CFAP221Q4G0U5 840 aa14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 UNC13DQ70J99 1090 aa14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 TRAPPC11Q7Z392 1133 aa14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 MON1AQ86VX9 555 aa14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 RALGPS2Q86X27 583 aaPredicted RBP14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 WDR49Q8IV35 697 aa14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 CELF5Q8N6W0 485 aaKnown RBP14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 IQUBQ8NA54 791 aa14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 RDH13Q8NBN7 331 aa14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 SPRYD3Q8NCJ5 442 aa14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 ATRIPQ8WXE1 791 aa14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 ELMO3Q96BJ8 720 aa14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 MYRFLQ96LU7 910 aa14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 CYP2S1Q96SQ9 504 aa14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 SYT15Q9BQS2 421 aa14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 EBF3Q9H4W6 596 aa14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 C8orf33Q9H7E9 229 aaPredicted RBP14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 FBRSL1Q9HCM7 1045 aaKnown RBP14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 POLR3BQ9NW08 1133 aaPredicted RBP14.84□□□□□ -0.03
GTF3C1-211ENST00000569653 C2orf78A6NCI8 922 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 CHURC1-FNTBB4DL54 471 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 KIAA0391O15091 583 aaKnown RBP14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 PDGFRBP09619 1106 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 CSH1P0DML2 217 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 CSH2P0DML3 217 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 WARSP23381 471 aaKnown RBP14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 FNTBP49356 437 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 CASP4P49662 377 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 ZXDBP98169 803 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 MYL7Q01449 175 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 DNM1Q05193 864 aaKnown RBP14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 PSMD6Q15008 389 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 BMT2Q1RMZ1 405 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 ITPRIPL2Q3MIP1 535 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 FSTL4Q6MZW2 842 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 SPEM1Q8N4L4 309 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 SPATA18Q8TC71 538 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 EZH1Q92800 747 aaPredicted RBP14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 CCDC127Q96BQ5 260 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 TRMT2BQ96GJ1 504 aaKnown RBP14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 MSANTD3Q96H12 275 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 ANKRD36BP1Q96IX9 119 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 GCNAQ96QF7 691 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 CGRRF1Q99675 332 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 HINFPQ9BQA5 517 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 DPEP3Q9H4B8 488 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 SLC39A2Q9NP94 309 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 GCNT4Q9P109 453 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 ZDHHC9Q9Y397 364 aa14.83□□□□□ -0.04
GTF3C1-211ENST00000569653 ANTXRLA6NF34 631 aa14.82□□□□□ -0.04
GTF3C1-211ENST00000569653 HRO43593 1189 aa14.82□□□□□ -0.04
GTF3C1-211ENST00000569653 ACTN4O43707 911 aaKnown RBP14.82□□□□□ -0.04
GTF3C1-211ENST00000569653 PAPSS2O95340 614 aaPredicted RBP14.82□□□□□ -0.04
GTF3C1-211ENST00000569653 TNNC2P02585 160 aa14.82□□□□□ -0.04
GTF3C1-211ENST00000569653 DLATP10515 647 aaKnown RBP14.82□□□□□ -0.04
GTF3C1-211ENST00000569653 BDNFP23560 247 aa14.82□□□□□ -0.04
GTF3C1-211ENST00000569653 MAGEA11P43364 429 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms