RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 MRPS25P82663 173 aaKnown RBP23.8■■□□□ 1.4
VCPKMT-205ENST00000569518 GRIK3Q13003 919 aa23.8■■□□□ 1.4
VCPKMT-205ENST00000569518 SEL1L2Q5TEA6 688 aa23.8■■□□□ 1.4
VCPKMT-205ENST00000569518 FNIP1Q8TF40 1166 aa23.8■■□□□ 1.4
VCPKMT-205ENST00000569518 SLC35F5Q8WV83 523 aa23.8■■□□□ 1.4
VCPKMT-205ENST00000569518 SENP8Q96LD8 212 aa23.8■■□□□ 1.4
VCPKMT-205ENST00000569518 KRT3P12035 628 aa23.79■■□□□ 1.4
VCPKMT-205ENST00000569518 CCL5P13501 91 aa23.79■■□□□ 1.4
VCPKMT-205ENST00000569518 RFC1P35251 1148 aaPredicted RBP23.79■■□□□ 1.4
VCPKMT-205ENST00000569518 WSCD1Q658N2 575 aa23.79■■□□□ 1.4
VCPKMT-205ENST00000569518 RHOT1Q8IXI2 618 aa23.79■■□□□ 1.4
VCPKMT-205ENST00000569518 KLHL7Q8IXQ5 586 aa23.79■■□□□ 1.4
VCPKMT-205ENST00000569518 JOSD2Q8TAC2 188 aa23.79■■□□□ 1.4
VCPKMT-205ENST00000569518 IPO4Q8TEX9 1081 aaKnown RBP23.79■■□□□ 1.4
VCPKMT-205ENST00000569518 PAAF1Q9BRP4 392 aa23.79■■□□□ 1.4
VCPKMT-205ENST00000569518 SLC4A5Q9BY07 1137 aa23.79■■□□□ 1.4
VCPKMT-205ENST00000569518 ARFGAP3Q9NP61 516 aa23.79■■□□□ 1.4
VCPKMT-205ENST00000569518 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.79■■□□□ 1.4
VCPKMT-205ENST00000569518 TSC2P49815 1807 aa23.78■■□□□ 1.4
VCPKMT-205ENST00000569518 CASTOR2A6NHX0 329 aa23.78■■□□□ 1.4
VCPKMT-205ENST00000569518 ZMYND10O75800 440 aa23.78■■□□□ 1.4
VCPKMT-205ENST00000569518 SEC31AO94979 1220 aaKnown RBP23.78■■□□□ 1.4
VCPKMT-205ENST00000569518 POMCP01189 267 aa23.78■■□□□ 1.4
VCPKMT-205ENST00000569518 HSPA6P17066 643 aa23.78■■□□□ 1.4
VCPKMT-205ENST00000569518 FAM189BP81408 668 aa23.78■■□□□ 1.4
VCPKMT-205ENST00000569518 SLC7A5Q01650 507 aa23.78■■□□□ 1.4
VCPKMT-205ENST00000569518 PIGHQ14442 188 aaPredicted RBP23.78■■□□□ 1.4
VCPKMT-205ENST00000569518 PMF1Q6P1K2 205 aa23.78■■□□□ 1.4
VCPKMT-205ENST00000569518 SLC24A5Q71RS6 500 aa23.78■■□□□ 1.4
VCPKMT-205ENST00000569518 STK32AQ8WU08 396 aa23.78■■□□□ 1.4
VCPKMT-205ENST00000569518 TNIP3Q96KP6 325 aa23.78■■□□□ 1.4
VCPKMT-205ENST00000569518 DNAI2Q9GZS0 605 aa23.78■■□□□ 1.4
VCPKMT-205ENST00000569518 HESX1Q9UBX0 185 aa23.78■■□□□ 1.4
VCPKMT-205ENST00000569518 E5RJQ4 531 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 TULP2O00295 520 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 RAD51CO43502 376 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 MYCP01106 439 aaPredicted RBP23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 CCDC130P13994 396 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 GPNMBQ14956 572 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 BEND6Q5SZJ8 279 aaPredicted RBP23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 SLC13A5Q86YT5 568 aaPredicted RBP23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 KATNAL2Q8IYT4 538 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 ZDHHC14Q8IZN3 488 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 ANKRD52Q8NB46 1076 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 MIS12Q9H081 205 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 DDX47Q9H0S4 455 aaKnown RBP23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 SLITRK6Q9H5Y7 841 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 WBP1LQ9NX94 342 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 F8VP50 259 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 SART1O43290 800 aaKnown RBP23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 ERLIN1O75477 346 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 EOMESO95936 686 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 PDE4CQ08493 712 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 TUSC3Q13454 348 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 BFSP2Q13515 415 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 LRRC38Q5VT99 294 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 TMEM110Q86TL2 294 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 TMEM86AQ8N2M4 240 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 B3GALNT2Q8NCR0 500 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 RNF208Q9H0X6 261 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 ST7Q9NRC1 585 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 METTL5Q9NRN9 209 aaKnown RBP23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 USTQ9Y2C2 406 aa23.77■■□□□ 1.4
VCPKMT-205ENST00000569518 GABBR2O75899 941 aa23.76■■□□□ 1.39
VCPKMT-205ENST00000569518 GLI1P08151 1106 aa23.76■■□□□ 1.39
VCPKMT-205ENST00000569518 TCF4P15884 667 aa23.76■■□□□ 1.39
VCPKMT-205ENST00000569518 TNFRSF8P28908 595 aa23.76■■□□□ 1.39
VCPKMT-205ENST00000569518 BCAT1P54687 386 aa23.76■■□□□ 1.39
VCPKMT-205ENST00000569518 CD300LGQ6UXG3 332 aa23.76■■□□□ 1.39
VCPKMT-205ENST00000569518 CCNI2Q6ZMN8 369 aaPredicted RBP23.76■■□□□ 1.39
VCPKMT-205ENST00000569518 PLVAPQ9BX97 442 aa23.76■■□□□ 1.39
VCPKMT-205ENST00000569518 INPP5FQ9Y2H2 1132 aa23.76■■□□□ 1.39
VCPKMT-205ENST00000569518 GOLGA6L10A0A0M3HER8 536 aa23.75■■□□□ 1.39
VCPKMT-205ENST00000569518 PITPNM1O00562 1244 aa23.75■■□□□ 1.39
VCPKMT-205ENST00000569518 NBNO60934 754 aa23.75■■□□□ 1.39
VCPKMT-205ENST00000569518 IBSPP21815 317 aaPredicted RBP23.75■■□□□ 1.39
VCPKMT-205ENST00000569518 TKTP29401 623 aaKnown RBP23.75■■□□□ 1.39
VCPKMT-205ENST00000569518 RPL34P49207 117 aaKnown RBP23.75■■□□□ 1.39
VCPKMT-205ENST00000569518 BST2Q10589 180 aaKnown RBP23.75■■□□□ 1.39
VCPKMT-205ENST00000569518 SIX1Q15475 284 aaPredicted RBP23.75■■□□□ 1.39
VCPKMT-205ENST00000569518 FAM183BPQ6ZVS7 135 aa23.75■■□□□ 1.39
VCPKMT-205ENST00000569518 ADAT2Q7Z6V5 191 aaKnown RBP23.75■■□□□ 1.39
VCPKMT-205ENST00000569518 SLC2A14Q8TDB8 520 aa23.75■■□□□ 1.39
VCPKMT-205ENST00000569518 FTHL17Q9BXU8 183 aa23.75■■□□□ 1.39
VCPKMT-205ENST00000569518 TCRBV7S2A1N4TA0A589 114 aa23.75■■□□□ 1.39
VCPKMT-205ENST00000569518 CAPN15O75808 1086 aa23.75■■□□□ 1.39
VCPKMT-205ENST00000569518 MYBL2P10244 700 aa23.75■■□□□ 1.39
VCPKMT-205ENST00000569518 RGS7P49802 495 aa23.75■■□□□ 1.39
VCPKMT-205ENST00000569518 PPP2R5EQ16537 467 aa23.75■■□□□ 1.39
VCPKMT-205ENST00000569518 TIGD5Q53EQ6 642 aa23.75■■□□□ 1.39
VCPKMT-205ENST00000569518 PRELID2Q8N945 189 aa23.75■■□□□ 1.39
VCPKMT-205ENST00000569518 UROC1Q96N76 676 aa23.75■■□□□ 1.39
VCPKMT-205ENST00000569518 HNRNPABQ99729 332 aaKnown RBP23.75■■□□□ 1.39
VCPKMT-205ENST00000569518 GDF3Q9NR23 364 aa23.75■■□□□ 1.39
VCPKMT-205ENST00000569518 TANC1Q9C0D5 1861 aa23.74■■□□□ 1.39
VCPKMT-205ENST00000569518 BHMG1C9JSJ3 638 aaPredicted RBP23.74■■□□□ 1.39
VCPKMT-205ENST00000569518 FSCN2O14926 492 aa23.74■■□□□ 1.39
VCPKMT-205ENST00000569518 ATP2C2O75185 946 aa23.74■■□□□ 1.39
VCPKMT-205ENST00000569518 HEXIM1O94992 359 aaKnown RBP23.74■■□□□ 1.39
VCPKMT-205ENST00000569518 PTPN1P18031 435 aaKnown RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms