RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 DEPDC1BQ8WUY9 529 aa21.54■■□□□ 1.04
ABCA3-206ENST00000569062 ATOH1Q92858 354 aaPredicted RBP21.54■■□□□ 1.04
ABCA3-206ENST00000569062 SYAP1Q96A49 352 aaPredicted RBP21.54■■□□□ 1.04
ABCA3-206ENST00000569062 FUBP3Q96I24 572 aaKnown RBP eCLIP21.54■■□□□ 1.04
ABCA3-206ENST00000569062 DLGAP2Q9P1A6 1054 aa21.54■■□□□ 1.04
ABCA3-206ENST00000569062 FRMD4BQ9Y2L6 1034 aa21.54■■□□□ 1.04
ABCA3-206ENST00000569062 MTF2Q9Y483 593 aaPredicted RBP21.54■■□□□ 1.04
ABCA3-206ENST00000569062 CSH1P0DML2 217 aa21.53■■□□□ 1.04
ABCA3-206ENST00000569062 CSH2P0DML3 217 aa21.53■■□□□ 1.04
ABCA3-206ENST00000569062 GLULP15104 373 aa21.53■■□□□ 1.04
ABCA3-206ENST00000569062 NR2F2P24468 414 aa21.53■■□□□ 1.04
ABCA3-206ENST00000569062 NLRP12P59046 1061 aa21.53■■□□□ 1.04
ABCA3-206ENST00000569062 NCOA4Q13772 614 aa21.53■■□□□ 1.04
ABCA3-206ENST00000569062 NFIL3Q16649 462 aa21.53■■□□□ 1.04
ABCA3-206ENST00000569062 C1orf220Q5T0J3 134 aa21.53■■□□□ 1.04
ABCA3-206ENST00000569062 C4orf50Q6ZRC1 276 aa21.53■■□□□ 1.04
ABCA3-206ENST00000569062 TPRG1Q6ZUI0 275 aa21.53■■□□□ 1.04
ABCA3-206ENST00000569062 SCN4BQ8IWT1 228 aa21.53■■□□□ 1.04
ABCA3-206ENST00000569062 TMC2Q8TDI7 906 aa21.53■■□□□ 1.04
ABCA3-206ENST00000569062 DNASE1L2Q92874 299 aa21.53■■□□□ 1.04
ABCA3-206ENST00000569062 ERCC4Q92889 916 aaPredicted RBP21.53■■□□□ 1.04
ABCA3-206ENST00000569062 IRF7Q92985 503 aa21.53■■□□□ 1.04
ABCA3-206ENST00000569062 E2F7Q96AV8 911 aa21.53■■□□□ 1.04
ABCA3-206ENST00000569062 CCDC34Q96HJ3 373 aa21.53■■□□□ 1.04
ABCA3-206ENST00000569062 LRRC3BQ96PB8 259 aa21.53■■□□□ 1.04
ABCA3-206ENST00000569062 GCNAQ96QF7 691 aa21.53■■□□□ 1.04
ABCA3-206ENST00000569062 SLC46A2Q9BY10 475 aa21.53■■□□□ 1.04
ABCA3-206ENST00000569062 SNX25Q9H3E2 840 aa21.53■■□□□ 1.04
ABCA3-206ENST00000569062 DPEP3Q9H4B8 488 aa21.53■■□□□ 1.04
ABCA3-206ENST00000569062 TASP1Q9H6P5 420 aa21.53■■□□□ 1.04
ABCA3-206ENST00000569062 VRTNQ9H8Y1 702 aa21.53■■□□□ 1.04
ABCA3-206ENST00000569062 MAGEC2Q9UBF1 373 aaPredicted RBP21.53■■□□□ 1.04
ABCA3-206ENST00000569062 USP34Q70CQ2 3546 aa21.52■■□□□ 1.04
ABCA3-206ENST00000569062 SHISA7A6NL88 538 aa21.52■■□□□ 1.04
ABCA3-206ENST00000569062 SLC38A8A6NNN8 435 aa21.52■■□□□ 1.04
ABCA3-206ENST00000569062 AKAP3O75969 853 aa21.52■■□□□ 1.04
ABCA3-206ENST00000569062 PRAMEF12O95522 483 aa21.52■■□□□ 1.04
ABCA3-206ENST00000569062 BDNFP23560 247 aa21.52■■□□□ 1.04
ABCA3-206ENST00000569062 CYP27A1Q02318 531 aa21.52■■□□□ 1.04
ABCA3-206ENST00000569062 FAM160A1Q05DH4 1040 aa21.52■■□□□ 1.04
ABCA3-206ENST00000569062 UBXN2BQ14CS0 331 aa21.52■■□□□ 1.04
ABCA3-206ENST00000569062 ZNF699Q32M78 642 aa21.52■■□□□ 1.04
ABCA3-206ENST00000569062 PCED1BQ96HM7 432 aa21.52■■□□□ 1.04
ABCA3-206ENST00000569062 SMG9Q9H0W8 520 aaKnown RBP21.52■■□□□ 1.04
ABCA3-206ENST00000569062 IRF2BPLQ9H1B7 796 aa21.52■■□□□ 1.04
ABCA3-206ENST00000569062 SMYD3Q9H7B4 428 aa21.52■■□□□ 1.04
ABCA3-206ENST00000569062 ANAPC1Q9H1A4 1944 aa21.51■■□□□ 1.03
ABCA3-206ENST00000569062 ZNF263O14978 683 aa21.51■■□□□ 1.03
ABCA3-206ENST00000569062 MAPK13O15264 365 aa21.51■■□□□ 1.03
ABCA3-206ENST00000569062 NOL4O94818 638 aa21.51■■□□□ 1.03
ABCA3-206ENST00000569062 CLSTN1O94985 981 aa21.51■■□□□ 1.03
ABCA3-206ENST00000569062 FAM163BP0C2L3 166 aa21.51■■□□□ 1.03
ABCA3-206ENST00000569062 MAGEA11P43364 429 aa21.51■■□□□ 1.03
ABCA3-206ENST00000569062 RAP1GAPP47736 663 aa21.51■■□□□ 1.03
ABCA3-206ENST00000569062 MRE11P49959 708 aa21.51■■□□□ 1.03
ABCA3-206ENST00000569062 VAMP7P51809 220 aa21.51■■□□□ 1.03
ABCA3-206ENST00000569062 CDH8P55286 799 aa21.51■■□□□ 1.03
ABCA3-206ENST00000569062 MAPRE1Q15691 268 aaKnown RBP21.51■■□□□ 1.03
ABCA3-206ENST00000569062 ZACNQ401N2 412 aa21.51■■□□□ 1.03
ABCA3-206ENST00000569062 ZCWPW2Q504Y3 356 aa21.51■■□□□ 1.03
ABCA3-206ENST00000569062 MDH1BQ5I0G3 518 aa21.51■■□□□ 1.03
ABCA3-206ENST00000569062 SV2AQ7L0J3 742 aa21.51■■□□□ 1.03
ABCA3-206ENST00000569062 MYCBPAPQ8TBZ2 947 aa21.51■■□□□ 1.03
ABCA3-206ENST00000569062 LTB4R2Q9NPC1 389 aa21.51■■□□□ 1.03
ABCA3-206ENST00000569062 KIF26AQ9ULI4 1882 aaPredicted RBP21.51■■□□□ 1.03
ABCA3-206ENST00000569062 FAM170BA6NMN3 283 aa21.5■■□□□ 1.03
ABCA3-206ENST00000569062 A8MXQ7 604 aa21.5■■□□□ 1.03
ABCA3-206ENST00000569062 ARNTLO00327 626 aa21.5■■□□□ 1.03
ABCA3-206ENST00000569062 DPYSL4O14531 572 aa21.5■■□□□ 1.03
ABCA3-206ENST00000569062 TADA3O75528 432 aa21.5■■□□□ 1.03
ABCA3-206ENST00000569062 PTPN1P18031 435 aaKnown RBP21.5■■□□□ 1.03
ABCA3-206ENST00000569062 FCHO2Q0JRZ9 810 aa21.5■■□□□ 1.03
ABCA3-206ENST00000569062 ADAM9Q13443 819 aa21.5■■□□□ 1.03
ABCA3-206ENST00000569062 ANGPT1Q15389 498 aa21.5■■□□□ 1.03
ABCA3-206ENST00000569062 ZNF667Q5HYK9 610 aa21.5■■□□□ 1.03
ABCA3-206ENST00000569062 TXNDC8Q6A555 127 aa21.5■■□□□ 1.03
ABCA3-206ENST00000569062 SCARA5Q6ZMJ2 495 aa21.5■■□□□ 1.03
ABCA3-206ENST00000569062 YAF2Q8IY57 180 aa21.5■■□□□ 1.03
ABCA3-206ENST00000569062 MAB21L3Q8N8X9 362 aa21.5■■□□□ 1.03
ABCA3-206ENST00000569062 TRMT2BQ96GJ1 504 aaKnown RBP21.5■■□□□ 1.03
ABCA3-206ENST00000569062 SDCBP2Q9H190 292 aa21.5■■□□□ 1.03
ABCA3-206ENST00000569062 TRPV5Q9NQA5 729 aa21.5■■□□□ 1.03
ABCA3-206ENST00000569062 PATJQ8NI35 1801 aa21.5■■□□□ 1.03
ABCA3-206ENST00000569062 IKBKBO14920 756 aa21.49■■□□□ 1.03
ABCA3-206ENST00000569062 CHADO15335 359 aa21.49■■□□□ 1.03
ABCA3-206ENST00000569062 TRIM49P0CI25 452 aa21.49■■□□□ 1.03
ABCA3-206ENST00000569062 TRIM49CP0CI26 452 aa21.49■■□□□ 1.03
ABCA3-206ENST00000569062 RPL13P26373 211 aaKnown RBP21.49■■□□□ 1.03
ABCA3-206ENST00000569062 TARSP26639 723 aaKnown RBP21.49■■□□□ 1.03
ABCA3-206ENST00000569062 WEE1P30291 646 aa21.49■■□□□ 1.03
ABCA3-206ENST00000569062 GRIK1P39086 918 aa21.49■■□□□ 1.03
ABCA3-206ENST00000569062 PRCPP42785 496 aa21.49■■□□□ 1.03
ABCA3-206ENST00000569062 VSTM1Q6UX27 236 aa21.49■■□□□ 1.03
ABCA3-206ENST00000569062 FAM186BQ8IYM0 893 aa21.49■■□□□ 1.03
ABCA3-206ENST00000569062 CMTM8Q8IZV2 173 aa21.49■■□□□ 1.03
ABCA3-206ENST00000569062 EEF2KMTQ96G04 330 aa21.49■■□□□ 1.03
ABCA3-206ENST00000569062 ZFYVE19Q96K21 471 aa21.49■■□□□ 1.03
ABCA3-206ENST00000569062 MYRFLQ96LU7 910 aa21.49■■□□□ 1.03
ABCA3-206ENST00000569062 RMND1Q9NWS8 449 aa21.49■■□□□ 1.03
ABCA3-206ENST00000569062 UXTQ9UBK9 157 aaPredicted RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms