RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 SLC12A3P55017 1021 aa13.45□□□□□ -0.26
SNX29-207ENST00000568949 USP4Q13107 963 aa13.45□□□□□ -0.26
SNX29-207ENST00000568949 ZNF77Q15935 545 aa13.45□□□□□ -0.26
SNX29-207ENST00000568949 IL17AQ16552 155 aa13.45□□□□□ -0.26
SNX29-207ENST00000568949 NFE2Q16621 373 aaPredicted RBP13.45□□□□□ -0.26
SNX29-207ENST00000568949 EML3Q32P44 896 aa13.45□□□□□ -0.26
SNX29-207ENST00000568949 WSCD1Q658N2 575 aa13.45□□□□□ -0.26
SNX29-207ENST00000568949 DTHD1Q6ZMT9 781 aa13.45□□□□□ -0.26
SNX29-207ENST00000568949 PIGKQ92643 395 aa13.45□□□□□ -0.26
SNX29-207ENST00000568949 FAM212AQ96EL1 285 aa13.45□□□□□ -0.26
SNX29-207ENST00000568949 TRMT2BQ96GJ1 504 aaKnown RBP13.45□□□□□ -0.26
SNX29-207ENST00000568949 MYRFLQ96LU7 910 aa13.45□□□□□ -0.26
SNX29-207ENST00000568949 TPSD1Q9BZJ3 242 aa13.45□□□□□ -0.26
SNX29-207ENST00000568949 MAGED2Q9UNF1 606 aaPredicted RBP13.45□□□□□ -0.26
SNX29-207ENST00000568949 C2CD2Q9Y426 696 aa13.45□□□□□ -0.26
SNX29-207ENST00000568949 PCDHB6Q9Y5E3 794 aa13.45□□□□□ -0.26
SNX29-207ENST00000568949 LAMA1P25391 3075 aa13.45□□□□□ -0.26
SNX29-207ENST00000568949 TRAV19A0A0A6YYK7 116 aa13.44□□□□□ -0.26
SNX29-207ENST00000568949 UPK3BL1B0FP48 263 aa13.44□□□□□ -0.26
SNX29-207ENST00000568949 UPK3BL2E5RIL1 263 aa13.44□□□□□ -0.26
SNX29-207ENST00000568949 TNFRSF10BO14763 440 aa13.44□□□□□ -0.26
SNX29-207ENST00000568949 HYAL3O43820 417 aaPredicted RBP13.44□□□□□ -0.26
SNX29-207ENST00000568949 PRPF40AO75400 957 aaKnown RBP13.44□□□□□ -0.26
SNX29-207ENST00000568949 TADA3O75528 432 aa13.44□□□□□ -0.26
SNX29-207ENST00000568949 NOL4O94818 638 aa13.44□□□□□ -0.26
SNX29-207ENST00000568949 USP17L7P0C7H9 530 aa13.44□□□□□ -0.26
SNX29-207ENST00000568949 DPP6P42658 865 aa13.44□□□□□ -0.26
SNX29-207ENST00000568949 NEK4P51957 841 aa13.44□□□□□ -0.26
SNX29-207ENST00000568949 RPL10AP62906 217 aaKnown RBP13.44□□□□□ -0.26
SNX29-207ENST00000568949 TSPY1Q01534 308 aa13.44□□□□□ -0.26
SNX29-207ENST00000568949 ANO7Q6IWH7 933 aa13.44□□□□□ -0.26
SNX29-207ENST00000568949 OLIG1Q8TAK6 271 aa13.44□□□□□ -0.26
SNX29-207ENST00000568949 LEO1Q8WVC0 666 aaPredicted RBP13.44□□□□□ -0.26
SNX29-207ENST00000568949 PNMA5Q96PV4 448 aa13.44□□□□□ -0.26
SNX29-207ENST00000568949 LLPHQ9BRT6 129 aaKnown RBP13.44□□□□□ -0.26
SNX29-207ENST00000568949 MSTO1Q9BUK6 570 aa13.44□□□□□ -0.26
SNX29-207ENST00000568949 ABCB6Q9NP58 842 aa13.44□□□□□ -0.26
SNX29-207ENST00000568949 ODF2LQ9ULJ1 636 aa13.44□□□□□ -0.26
SNX29-207ENST00000568949 MMP17Q9ULZ9 603 aa13.44□□□□□ -0.26
SNX29-207ENST00000568949 WNT6Q9Y6F9 365 aa13.44□□□□□ -0.26
SNX29-207ENST00000568949 ANAPC1Q9H1A4 1944 aa13.43□□□□□ -0.26
SNX29-207ENST00000568949 AKAP13Q12802 2813 aa13.43□□□□□ -0.26
SNX29-207ENST00000568949 SPEGQ15772 3267 aa13.43□□□□□ -0.26
SNX29-207ENST00000568949 FAM221BA6H8Z2 402 aa13.43□□□□□ -0.26
SNX29-207ENST00000568949 K7EQS6 105 aa13.43□□□□□ -0.26
SNX29-207ENST00000568949 ALDH1A2O94788 518 aa13.43□□□□□ -0.26
SNX29-207ENST00000568949 CKMP06732 381 aa13.43□□□□□ -0.26
SNX29-207ENST00000568949 PLA2G4BP0C869 781 aa13.43□□□□□ -0.26
SNX29-207ENST00000568949 GPR15P49685 360 aa13.43□□□□□ -0.26
SNX29-207ENST00000568949 POU5F1Q01860 360 aaKnown RBP13.43□□□□□ -0.26
SNX29-207ENST00000568949 ZRSR1Q15695 479 aaKnown RBP13.43□□□□□ -0.26
SNX29-207ENST00000568949 CRY1Q16526 586 aa13.43□□□□□ -0.26
SNX29-207ENST00000568949 TRIM61Q5EBN2 209 aa13.43□□□□□ -0.26
SNX29-207ENST00000568949 KIAA1211LQ6NV74 962 aa13.43□□□□□ -0.26
SNX29-207ENST00000568949 LPCAT2Q7L5N7 544 aa13.43□□□□□ -0.26
SNX29-207ENST00000568949 PIP4P1Q86T03 277 aa13.43□□□□□ -0.26
SNX29-207ENST00000568949 SYT12Q8IV01 421 aa13.43□□□□□ -0.26
SNX29-207ENST00000568949 MDGA1Q8NFP4 955 aa13.43□□□□□ -0.26
SNX29-207ENST00000568949 PI4K2AQ9BTU6 479 aa13.43□□□□□ -0.26
SNX29-207ENST00000568949 NUSAP1Q9BXS6 441 aaKnown RBP13.43□□□□□ -0.26
SNX29-207ENST00000568949 TMLHEQ9NVH6 421 aa13.43□□□□□ -0.26
SNX29-207ENST00000568949 DPP3Q9NY33 737 aa13.43□□□□□ -0.26
SNX29-207ENST00000568949 TNRC6BQ9UPQ9 1833 aaKnown RBP13.43□□□□□ -0.26
SNX29-207ENST00000568949 NPHP3-ACAD11A0A0J9YXS1 232 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 KPNA7A9QM74 516 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 H0Y626 953 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 TAF4O00268 1085 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 TRIM16O95361 564 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 NFATC1O95644 943 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 ABCD1P33897 745 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 RDXP35241 583 aaKnown RBP13.42□□□□□ -0.26
SNX29-207ENST00000568949 OPRD1P41143 372 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 P2RY2P41231 377 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 MRPS21P82921 87 aaKnown RBP13.42□□□□□ -0.26
SNX29-207ENST00000568949 HMGN5P82970 282 aaKnown RBP13.42□□□□□ -0.26
SNX29-207ENST00000568949 SEMA3BQ13214 749 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 SV2CQ496J9 727 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 HSF5Q4G112 596 aaPredicted RBP13.42□□□□□ -0.26
SNX29-207ENST00000568949 C2orf27AQ580R0 203 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 ARSHQ5FYA8 562 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 SPDYCQ5MJ68 293 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 LMBRD2Q68DH5 695 aaPredicted RBP13.42□□□□□ -0.26
SNX29-207ENST00000568949 EFCAB13Q8IY85 973 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 STKLD1Q8NE28 680 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 SH3RF2Q8TEC5 729 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 SLC22A12Q96S37 553 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 CYP2S1Q96SQ9 504 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 TRPC7Q9HCX4 862 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.42□□□□□ -0.26
SNX29-207ENST00000568949 GCNT4Q9P109 453 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 KLK13Q9UKR3 277 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 LIMCH1Q9UPQ0 1083 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 PLXND1Q9Y4D7 1925 aa13.42□□□□□ -0.26
SNX29-207ENST00000568949 ASPMQ8IZT6 3477 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 K7ENM7 598 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 ENGP17813 658 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 PFKLP17858 780 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 HOXD12P35452 270 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 PNPLA4P41247 253 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 MAPK8P45983 427 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms