RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 NLRP12P59046 1061 aa31.42■■■□□ 2.62
RAB40C-211ENST00000568586 TNNC1P63316 161 aa31.42■■■□□ 2.62
RAB40C-211ENST00000568586 GRM2Q14416 872 aa31.42■■■□□ 2.62
RAB40C-211ENST00000568586 DDR2Q16832 855 aa31.42■■■□□ 2.62
RAB40C-211ENST00000568586 GPR158Q5T848 1215 aa31.42■■■□□ 2.62
RAB40C-211ENST00000568586 VSTM1Q6UX27 236 aa31.42■■■□□ 2.62
RAB40C-211ENST00000568586 MYCBPAPQ8TBZ2 947 aa31.42■■■□□ 2.62
RAB40C-211ENST00000568586 BRD9Q9H8M2 597 aa31.42■■■□□ 2.62
RAB40C-211ENST00000568586 MAPK8IP1Q9UQF2 711 aa31.42■■■□□ 2.62
RAB40C-211ENST00000568586 F5P12259 2224 aa31.42■■■□□ 2.62
RAB40C-211ENST00000568586 PHACTR2O75167 634 aa31.41■■■□□ 2.62
RAB40C-211ENST00000568586 RFX1P22670 979 aa31.41■■■□□ 2.62
RAB40C-211ENST00000568586 NCOA4Q13772 614 aa31.41■■■□□ 2.62
RAB40C-211ENST00000568586 COBLL1Q53SF7 1204 aa31.41■■■□□ 2.62
RAB40C-211ENST00000568586 GSDMAQ96QA5 445 aa31.41■■■□□ 2.62
RAB40C-211ENST00000568586 GCNAQ96QF7 691 aa31.41■■■□□ 2.62
RAB40C-211ENST00000568586 SLC46A2Q9BY10 475 aa31.41■■■□□ 2.62
RAB40C-211ENST00000568586 FOXQ1Q9C009 403 aa31.41■■■□□ 2.62
RAB40C-211ENST00000568586 SNX25Q9H3E2 840 aa31.41■■■□□ 2.62
RAB40C-211ENST00000568586 MAGEC2Q9UBF1 373 aaPredicted RBP31.41■■■□□ 2.62
RAB40C-211ENST00000568586 H0Y858 1186 aa31.4■■■□□ 2.62
RAB40C-211ENST00000568586 AKAP3O75969 853 aa31.4■■■□□ 2.62
RAB40C-211ENST00000568586 PDGFRBP09619 1106 aa31.4■■■□□ 2.62
RAB40C-211ENST00000568586 NR2F2P24468 414 aa31.4■■■□□ 2.62
RAB40C-211ENST00000568586 DDX6P26196 483 aaKnown RBP eCLIP31.4■■■□□ 2.62
RAB40C-211ENST00000568586 RPL13P26373 211 aaKnown RBP31.4■■■□□ 2.62
RAB40C-211ENST00000568586 GDI1P31150 447 aa31.4■■■□□ 2.62
RAB40C-211ENST00000568586 MLLT6P55198 1093 aaPredicted RBP31.4■■■□□ 2.62
RAB40C-211ENST00000568586 PSMC1P62191 440 aaKnown RBP31.4■■■□□ 2.62
RAB40C-211ENST00000568586 BIRC3Q13489 604 aa31.4■■■□□ 2.62
RAB40C-211ENST00000568586 PNOCQ13519 176 aa31.4■■■□□ 2.62
RAB40C-211ENST00000568586 CEP135Q66GS9 1140 aa31.4■■■□□ 2.62
RAB40C-211ENST00000568586 SV2AQ7L0J3 742 aa31.4■■■□□ 2.62
RAB40C-211ENST00000568586 ELOA2Q8IYF1 753 aaPredicted RBP31.4■■■□□ 2.62
RAB40C-211ENST00000568586 MYLPFQ96A32 169 aa31.4■■■□□ 2.62
RAB40C-211ENST00000568586 LRRC3BQ96PB8 259 aa31.4■■■□□ 2.62
RAB40C-211ENST00000568586 NELL2Q99435 816 aa31.4■■■□□ 2.62
RAB40C-211ENST00000568586 RMND1Q9NWS8 449 aa31.4■■■□□ 2.62
RAB40C-211ENST00000568586 CHADO15335 359 aa31.39■■■□□ 2.62
RAB40C-211ENST00000568586 CYP4F8P98187 520 aa31.39■■■□□ 2.62
RAB40C-211ENST00000568586 EDRF1Q3B7T1 1238 aa31.39■■■□□ 2.62
RAB40C-211ENST00000568586 SDHAF4Q5VUM1 108 aa31.39■■■□□ 2.62
RAB40C-211ENST00000568586 TAF4BQ92750 862 aa31.39■■■□□ 2.62
RAB40C-211ENST00000568586 PCED1BQ96HM7 432 aa31.39■■■□□ 2.62
RAB40C-211ENST00000568586 SPATA17Q96L03 361 aa31.39■■■□□ 2.62
RAB40C-211ENST00000568586 HEBP1Q9NRV9 189 aa31.39■■■□□ 2.62
RAB40C-211ENST00000568586 UXTQ9UBK9 157 aaPredicted RBP31.39■■■□□ 2.62
RAB40C-211ENST00000568586 NXF1Q9UBU9 619 aaKnown RBP31.39■■■□□ 2.62
RAB40C-211ENST00000568586 CIZ1Q9ULV3 898 aaPredicted RBP31.39■■■□□ 2.62
RAB40C-211ENST00000568586 MYO15AQ9UKN7 3530 aa31.39■■■□□ 2.62
RAB40C-211ENST00000568586 SLC38A8A6NNN8 435 aa31.38■■■□□ 2.61
RAB40C-211ENST00000568586 GLULP15104 373 aa31.38■■■□□ 2.61
RAB40C-211ENST00000568586 SGSM1Q2NKQ1 1148 aa31.38■■■□□ 2.61
RAB40C-211ENST00000568586 ZNF699Q32M78 642 aa31.38■■■□□ 2.61
RAB40C-211ENST00000568586 INTS8Q75QN2 995 aaKnown RBP31.38■■■□□ 2.61
RAB40C-211ENST00000568586 OR6B3Q8NGW1 331 aa31.38■■■□□ 2.61
RAB40C-211ENST00000568586 LTB4R2Q9NPC1 389 aa31.38■■■□□ 2.61
RAB40C-211ENST00000568586 COL4A2P08572 1712 aa31.38■■■□□ 2.61
RAB40C-211ENST00000568586 DMDP11532 3685 aa31.37■■■□□ 2.61
RAB40C-211ENST00000568586 ZNF263O14978 683 aa31.37■■■□□ 2.61
RAB40C-211ENST00000568586 DCNP07585 359 aaKnown RBP31.37■■■□□ 2.61
RAB40C-211ENST00000568586 PTPN1P18031 435 aaKnown RBP31.37■■■□□ 2.61
RAB40C-211ENST00000568586 VAMP7P51809 220 aa31.37■■■□□ 2.61
RAB40C-211ENST00000568586 ADAM9Q13443 819 aa31.37■■■□□ 2.61
RAB40C-211ENST00000568586 ZNF667Q5HYK9 610 aa31.37■■■□□ 2.61
RAB40C-211ENST00000568586 TPRG1Q6ZUI0 275 aa31.37■■■□□ 2.61
RAB40C-211ENST00000568586 CMTM8Q8IZV2 173 aa31.37■■■□□ 2.61
RAB40C-211ENST00000568586 ZNF687Q8N1G0 1237 aa31.37■■■□□ 2.61
RAB40C-211ENST00000568586 ATOH1Q92858 354 aaPredicted RBP31.37■■■□□ 2.61
RAB40C-211ENST00000568586 PHOX2BQ99453 314 aa31.37■■■□□ 2.61
RAB40C-211ENST00000568586 MTF2Q9Y483 593 aaPredicted RBP31.37■■■□□ 2.61
RAB40C-211ENST00000568586 COL4A3Q01955 1670 aa31.37■■■□□ 2.61
RAB40C-211ENST00000568586 NUP210Q8TEM1 1887 aaPredicted RBP31.37■■■□□ 2.61
RAB40C-211ENST00000568586 USP34Q70CQ2 3546 aa31.36■■■□□ 2.61
RAB40C-211ENST00000568586 PRAMEF12O95522 483 aa31.36■■■□□ 2.61
RAB40C-211ENST00000568586 PSMC2P35998 433 aaKnown RBP31.36■■■□□ 2.61
RAB40C-211ENST00000568586 ZNF852Q6ZMS4 543 aa31.36■■■□□ 2.61
RAB40C-211ENST00000568586 MON1AQ86VX9 555 aa31.36■■■□□ 2.61
RAB40C-211ENST00000568586 CLDN23Q96B33 292 aa31.36■■■□□ 2.61
RAB40C-211ENST00000568586 GTPBP4Q9BZE4 634 aaKnown RBP31.36■■■□□ 2.61
RAB40C-211ENST00000568586 DENND4CQ5VZ89 1909 aa31.36■■■□□ 2.61
RAB40C-211ENST00000568586 VPS13AQ96RL7 3174 aa31.36■■■□□ 2.61
RAB40C-211ENST00000568586 ZFHX2Q9C0A1 2572 aaPredicted RBP31.35■■■□□ 2.61
RAB40C-211ENST00000568586 PROB1E7EW31 1015 aa31.35■■■□□ 2.61
RAB40C-211ENST00000568586 MAN2B1O00754 1011 aa31.35■■■□□ 2.61
RAB40C-211ENST00000568586 TADA3O75528 432 aa31.35■■■□□ 2.61
RAB40C-211ENST00000568586 ASS1P00966 412 aaKnown RBP31.35■■■□□ 2.61
RAB40C-211ENST00000568586 BDNFP23560 247 aa31.35■■■□□ 2.61
RAB40C-211ENST00000568586 MRE11P49959 708 aa31.35■■■□□ 2.61
RAB40C-211ENST00000568586 MDH1BQ5I0G3 518 aa31.35■■■□□ 2.61
RAB40C-211ENST00000568586 ZNF658Q5TYW1 1059 aaPredicted RBP31.35■■■□□ 2.61
RAB40C-211ENST00000568586 SCN4BQ8IWT1 228 aa31.35■■■□□ 2.61
RAB40C-211ENST00000568586 FAM186BQ8IYM0 893 aa31.35■■■□□ 2.61
RAB40C-211ENST00000568586 SMYD4Q8IYR2 804 aaPredicted RBP31.35■■■□□ 2.61
RAB40C-211ENST00000568586 STKLD1Q8NE28 680 aa31.35■■■□□ 2.61
RAB40C-211ENST00000568586 SMYD3Q9H7B4 428 aa31.35■■■□□ 2.61
RAB40C-211ENST00000568586 MAGED2Q9UNF1 606 aaPredicted RBP31.35■■■□□ 2.61
RAB40C-211ENST00000568586 PCDHA5Q9Y5H7 936 aa31.35■■■□□ 2.61
RAB40C-211ENST00000568586 PTPRDP23468 1912 aa31.34■■■□□ 2.61
RAB40C-211ENST00000568586 FAM170BA6NMN3 283 aa31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms