RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 FAM189A1O60320 539 aa8.38□□□□□ -1.07
SMG1-214ENST00000568038 CXCL8P10145 99 aa8.38□□□□□ -1.07
SMG1-214ENST00000568038 EPB41P11171 864 aaKnown RBP8.38□□□□□ -1.07
SMG1-214ENST00000568038 ACTN1P12814 892 aa8.38□□□□□ -1.07
SMG1-214ENST00000568038 ITGA4P13612 1032 aa8.38□□□□□ -1.07
SMG1-214ENST00000568038 ATF7P17544 494 aaPredicted RBP8.38□□□□□ -1.07
SMG1-214ENST00000568038 PSMC2P35998 433 aaKnown RBP8.38□□□□□ -1.07
SMG1-214ENST00000568038 YARSP54577 528 aaKnown RBP8.38□□□□□ -1.07
SMG1-214ENST00000568038 SNRNP35Q16560 246 aaKnown RBP8.38□□□□□ -1.07
SMG1-214ENST00000568038 KYAT1Q16773 422 aa8.38□□□□□ -1.07
SMG1-214ENST00000568038 TMEM240Q5SV17 173 aa8.38□□□□□ -1.07
SMG1-214ENST00000568038 FOXR2Q6PJQ5 311 aa8.38□□□□□ -1.07
SMG1-214ENST00000568038 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.38□□□□□ -1.07
SMG1-214ENST00000568038 ZC3H3Q8IXZ2 948 aaKnown RBP8.38□□□□□ -1.07
SMG1-214ENST00000568038 FAM186BQ8IYM0 893 aa8.38□□□□□ -1.07
SMG1-214ENST00000568038 HACE1Q8IYU2 909 aa8.38□□□□□ -1.07
SMG1-214ENST00000568038 DMRTB1Q96MA1 342 aa8.38□□□□□ -1.07
SMG1-214ENST00000568038 FBXL18Q96ME1 805 aa8.38□□□□□ -1.07
SMG1-214ENST00000568038 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.38□□□□□ -1.078e-9■■■□□ 16.8
SMG1-214ENST00000568038 THAP9Q9H5L6 903 aa8.38□□□□□ -1.07
SMG1-214ENST00000568038 KIAA1586Q9HCI6 787 aa8.38□□□□□ -1.07
SMG1-214ENST00000568038 PDE11AQ9HCR9 933 aa8.38□□□□□ -1.07
SMG1-214ENST00000568038 RBAKQ9NYW8 714 aaPredicted RBP8.38□□□□□ -1.07
SMG1-214ENST00000568038 MAGEC2Q9UBF1 373 aaPredicted RBP8.38□□□□□ -1.07
SMG1-214ENST00000568038 CPSF3Q9UKF6 684 aaKnown RBP8.38□□□□□ -1.07
SMG1-214ENST00000568038 PCDHB7Q9Y5E2 793 aa8.38□□□□□ -1.07
SMG1-214ENST00000568038 FAM170BA6NMN3 283 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.37□□□□□ -1.07
SMG1-214ENST00000568038 LACTBL1A8MY62 500 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 KCNJ18B7U540 433 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 H0YGN5 161 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 SLC16A3O15427 465 aaKnown RBP8.37□□□□□ -1.07
SMG1-214ENST00000568038 MEFVO15553 781 aaPredicted RBP8.37□□□□□ -1.07
SMG1-214ENST00000568038 ZNF623O75123 536 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 RECQL4O94761 1208 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 GNA14O95837 355 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 FGFR1P11362 822 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 KRT13P13646 458 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 CDK11BP21127 795 aaKnown RBP8.37□□□□□ -1.07
SMG1-214ENST00000568038 MAGEA10P43363 369 aaPredicted RBP8.37□□□□□ -1.07
SMG1-214ENST00000568038 MTIF2P46199 727 aaKnown RBP8.37□□□□□ -1.07
SMG1-214ENST00000568038 KCNJ6P48051 423 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 WDR5P61964 334 aaKnown RBP8.37□□□□□ -1.07
SMG1-214ENST00000568038 TPM4P67936 248 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 FAM189BP81408 668 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 DEFB103AP81534 67 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 SPAG1Q07617 926 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 CYP24A1Q07973 514 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 MAP7Q14244 749 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 GRM2Q14416 872 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 KCNJ12Q14500 433 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 HSP90AA2PQ14568 343 aaPredicted RBP8.37□□□□□ -1.07
SMG1-214ENST00000568038 ENOX2Q16206 610 aaKnown RBP8.37□□□□□ -1.07
SMG1-214ENST00000568038 SLC10A6Q3KNW5 377 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 TCERG1LQ5VWI1 586 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 LMBRD2Q68DH5 695 aaPredicted RBP8.37□□□□□ -1.07
SMG1-214ENST00000568038 AGMOQ6ZNB7 445 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 MRPL10Q7Z7H8 261 aaKnown RBP8.37□□□□□ -1.07
SMG1-214ENST00000568038 ZAR1Q86SH2 424 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 IRF2BP1Q8IU81 584 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 FAM114A1Q8IWE2 563 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 BRSK2Q8IWQ3 736 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 TMEM174Q8WUU8 243 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 CCDC127Q96BQ5 260 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 PGBD4Q96DM1 585 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 CNOT6LQ96LI5 555 aaKnown RBP8.37□□□□□ -1.07
SMG1-214ENST00000568038 FNBP1Q96RU3 617 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 GAD1Q99259 594 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 CXCL16Q9H2A7 254 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 INPP5FQ9Y2H2 1132 aa8.37□□□□□ -1.07
SMG1-214ENST00000568038 LTBP2Q14767 1821 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 TTC26A0AVF1 554 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 MAPK13O15264 365 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 CYP26A1O43174 497 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 EFCAB14O75071 495 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 BAIAP3O94812 1187 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 EOMESO95936 686 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 AMHP03971 560 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 TRIM49P0CI25 452 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 TRIM49CP0CI26 452 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 DLATP10515 647 aaKnown RBP8.36□□□□□ -1.07
SMG1-214ENST00000568038 ATP1A3P13637 1013 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 MLH1P40692 756 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 RGS19P49795 217 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 GATMP50440 423 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 VAMP7P51809 220 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 DLG4P78352 724 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 PPP2R3AQ06190 1150 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 PSMD6Q15008 389 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 TCP11X2Q5H9J9 407 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 DCAF17Q5H9S7 520 aaPredicted RBP8.36□□□□□ -1.07
SMG1-214ENST00000568038 GLRA4Q5JXX5 417 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 CDKAL1Q5VV42 579 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 JADE1Q6IE81 842 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 PSRC1Q6PGN9 363 aaPredicted RBP8.36□□□□□ -1.07
SMG1-214ENST00000568038 FAM43BQ6ZT52 329 aaPredicted RBP8.36□□□□□ -1.07
SMG1-214ENST00000568038 FRMD5Q7Z6J6 570 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 TMCO2Q7Z6W1 182 aaPredicted RBP8.36□□□□□ -1.07
SMG1-214ENST00000568038 NPAS4Q8IUM7 802 aa8.36□□□□□ -1.07
SMG1-214ENST00000568038 PLEKHO2Q8TD55 490 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms