RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 CLCN6P51797 869 aa15.48■□□□□ 0.07
COMMD4-221ENST00000567935 RAD23BP54727 409 aa15.48■□□□□ 0.07
COMMD4-221ENST00000567935 TCF15Q12870 199 aa15.48■□□□□ 0.07
COMMD4-221ENST00000567935 PTK7Q13308 1070 aa15.48■□□□□ 0.07
COMMD4-221ENST00000567935 MESDQ14696 234 aa15.48■□□□□ 0.07
COMMD4-221ENST00000567935 PHOSPHO2Q8TCD6 241 aa15.48■□□□□ 0.07
COMMD4-221ENST00000567935 CPA5Q8WXQ8 436 aa15.48■□□□□ 0.07
COMMD4-221ENST00000567935 TMEM176AQ96HP8 235 aa15.48■□□□□ 0.07
COMMD4-221ENST00000567935 ZSWIM1Q9BR11 485 aa15.48■□□□□ 0.07
COMMD4-221ENST00000567935 NXF3Q9H4D5 531 aaKnown RBP15.48■□□□□ 0.07
COMMD4-221ENST00000567935 FAM86C1Q9NVL1 165 aa15.48■□□□□ 0.07
COMMD4-221ENST00000567935 WDR35Q9P2L0 1181 aa15.48■□□□□ 0.07
COMMD4-221ENST00000567935 TMEM59LQ9UK28 342 aa15.48■□□□□ 0.07
COMMD4-221ENST00000567935 MYO1FO00160 1098 aa15.47■□□□□ 0.07
COMMD4-221ENST00000567935 SPOPO43791 374 aa15.47■□□□□ 0.07
COMMD4-221ENST00000567935 RHOXF2BP0C7M4 288 aa15.47■□□□□ 0.07
COMMD4-221ENST00000567935 COMTP21964 271 aa15.47■□□□□ 0.07
COMMD4-221ENST00000567935 RRM1P23921 792 aa15.47■□□□□ 0.07
COMMD4-221ENST00000567935 BRD2P25440 801 aaKnown RBP15.47■□□□□ 0.07
COMMD4-221ENST00000567935 CTNNA1P35221 906 aaKnown RBP15.47■□□□□ 0.07
COMMD4-221ENST00000567935 RAB27AP51159 221 aa15.47■□□□□ 0.07
COMMD4-221ENST00000567935 GSCP56915 257 aaPredicted RBP15.47■□□□□ 0.07
COMMD4-221ENST00000567935 ZP2Q05996 745 aa15.47■□□□□ 0.07
COMMD4-221ENST00000567935 C2orf54Q08AI8 447 aa15.47■□□□□ 0.07
COMMD4-221ENST00000567935 MGAT3Q09327 533 aa15.47■□□□□ 0.07
COMMD4-221ENST00000567935 PTP4A2Q12974 167 aa15.47■□□□□ 0.07
COMMD4-221ENST00000567935 TWF2Q6IBS0 349 aaKnown RBP15.47■□□□□ 0.07
COMMD4-221ENST00000567935 UNC93AQ86WB7 457 aa15.47■□□□□ 0.07
COMMD4-221ENST00000567935 RHOXF2Q9BQY4 288 aa15.47■□□□□ 0.07
COMMD4-221ENST00000567935 TRAIPQ9BWF2 469 aa15.47■□□□□ 0.07
COMMD4-221ENST00000567935 GOLPH3Q9H4A6 298 aa15.47■□□□□ 0.07
COMMD4-221ENST00000567935 SMYD3Q9H7B4 428 aa15.47■□□□□ 0.07
COMMD4-221ENST00000567935 SLC38A7Q9NVC3 462 aa15.47■□□□□ 0.07
COMMD4-221ENST00000567935 ANAPC7Q9UJX3 599 aa15.47■□□□□ 0.07
COMMD4-221ENST00000567935 NOC2LQ9Y3T9 749 aaKnown RBP15.47■□□□□ 0.07
COMMD4-221ENST00000567935 IPPQ9Y573 584 aa15.47■□□□□ 0.07
COMMD4-221ENST00000567935 GOLGA6L10A0A0M3HER8 536 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 SMIM28A0A1B0GU29 152 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 H3BQ06 376 aaPredicted RBP15.46■□□□□ 0.07
COMMD4-221ENST00000567935 ATMINO43313 823 aaPredicted RBP15.46■□□□□ 0.07
COMMD4-221ENST00000567935 SKIP12755 728 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 CD19P15391 556 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 DNA2P51530 1060 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 CNGA2Q16280 664 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 PTGISQ16647 500 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 FAM26DQ5JW98 314 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 C9orf57Q5W0N0 161 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 SCARA3Q6AZY7 606 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 C8orf74Q6P047 294 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 ERICH1Q86X53 443 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 SLC4A11Q8NBS3 891 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 PPP1R13LQ8WUF5 828 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 CD101Q93033 1021 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 MS4A14Q96JA4 679 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 ZMAT2Q96NC0 199 aaKnown RBP15.46■□□□□ 0.07
COMMD4-221ENST00000567935 C11orf70Q9BRQ4 267 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 NT5C1AQ9BXI3 368 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 SDCBP2Q9H190 292 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 GDAP2Q9NXN4 497 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 PARP2Q9UGN5 583 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 MTUS1Q9ULD2 1270 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 ST3GAL5Q9UNP4 418 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.46■□□□□ 0.07
COMMD4-221ENST00000567935 PCDHA3Q9Y5H8 950 aa15.46■□□□□ 0.07
COMMD4-221ENST00000567935 C19orf67A6NJJ6 358 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 PIRO00625 290 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 PROSCO94903 275 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 PAX3P23760 479 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 TNFRSF8P28908 595 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 LRPAP1P30533 357 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 RWDD2BP57060 319 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 MAMLD1Q13495 774 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 SV2CQ496J9 727 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 ZNF394Q53GI3 561 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 SGO2Q562F6 1265 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 FBXO47Q5MNV8 452 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 SEL1L2Q5TEA6 688 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 CC2D1AQ6P1N0 951 aaPredicted RBP15.45■□□□□ 0.06
COMMD4-221ENST00000567935 MMS22LQ6ZRQ5 1243 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 PASD1Q8IV76 773 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 SMG8Q8ND04 991 aaKnown RBP15.45■□□□□ 0.06
COMMD4-221ENST00000567935 C3orf20Q8ND61 904 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 FEZF2Q8TBJ5 459 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 WHAMMQ8TF30 809 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 TFAP2BQ92481 460 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 ELOVL4Q9GZR5 314 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 SLITRK6Q9H5Y7 841 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 RBM12Q9NTZ6 932 aaKnown RBP15.45■□□□□ 0.06
COMMD4-221ENST00000567935 IP6K2Q9UHH9 426 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 DCHS1Q96JQ0 3298 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 TECTAO75443 2155 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 PTPRSQ13332 1948 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 TRIOO75962 3097 aa15.45■□□□□ 0.06
COMMD4-221ENST00000567935 TMEM110-MUSTN1A8MSY1 372 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 RRP9O43818 475 aaKnown RBP15.44■□□□□ 0.06
COMMD4-221ENST00000567935 ZNF623O75123 536 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 CALCAP01258 141 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 CHRNA1P02708 482 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 SETSIPP0DME0 302 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 IRS1P35568 1242 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms