RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 KAT5Q92993 513 aa18.34■□□□□ 0.53
COMMD4-220ENST00000567720 NT5C1BQ96P26 610 aa18.34■□□□□ 0.53
COMMD4-220ENST00000567720 BPIFA3Q9BQP9 254 aa18.34■□□□□ 0.53
COMMD4-220ENST00000567720 TUBGCP2Q9BSJ2 902 aa18.34■□□□□ 0.53
COMMD4-220ENST00000567720 CRACR2AQ9BSW2 395 aa18.34■□□□□ 0.53
COMMD4-220ENST00000567720 ZNF518BQ9C0D4 1074 aa18.34■□□□□ 0.53
COMMD4-220ENST00000567720 ELOVL4Q9GZR5 314 aa18.34■□□□□ 0.53
COMMD4-220ENST00000567720 CD320Q9NPF0 282 aa18.34■□□□□ 0.53
COMMD4-220ENST00000567720 CISHQ9NSE2 258 aa18.34■□□□□ 0.53
COMMD4-220ENST00000567720 TMEM30AQ9NV96 361 aa18.34■□□□□ 0.53
COMMD4-220ENST00000567720 FANCLQ9NW38 375 aa18.34■□□□□ 0.53
COMMD4-220ENST00000567720 MYO10Q9HD67 2058 aa18.34■□□□□ 0.53
COMMD4-220ENST00000567720 C19orf67A6NJJ6 358 aa18.33■□□□□ 0.52
COMMD4-220ENST00000567720 C2CD4DB7Z1M9 353 aa18.33■□□□□ 0.52
COMMD4-220ENST00000567720 LOC730098B7Z3J9 87 aa18.33■□□□□ 0.52
COMMD4-220ENST00000567720 LETM1O95202 739 aaPredicted RBP18.33■□□□□ 0.52
COMMD4-220ENST00000567720 RHOP08100 348 aa18.33■□□□□ 0.52
COMMD4-220ENST00000567720 ZNF18P17022 549 aa18.33■□□□□ 0.52
COMMD4-220ENST00000567720 ALDH1A3P47895 512 aa18.33■□□□□ 0.52
COMMD4-220ENST00000567720 TUFMP49411 452 aaKnown RBP18.33■□□□□ 0.52
COMMD4-220ENST00000567720 CACNA2D1P54289 1103 aa18.33■□□□□ 0.52
COMMD4-220ENST00000567720 CETN1Q12798 172 aa18.33■□□□□ 0.52
COMMD4-220ENST00000567720 PABPC1LQ4VXU2 614 aaKnown RBP18.33■□□□□ 0.52
COMMD4-220ENST00000567720 SDHAF4Q5VUM1 108 aa18.33■□□□□ 0.52
COMMD4-220ENST00000567720 FAM35AQ86V20 835 aa18.33■□□□□ 0.52
COMMD4-220ENST00000567720 DHX40Q8IX18 779 aaKnown RBP18.33■□□□□ 0.52
COMMD4-220ENST00000567720 HS6ST3Q8IZP7 471 aa18.33■□□□□ 0.52
COMMD4-220ENST00000567720 RPGRIP1Q96KN7 1286 aa18.33■□□□□ 0.52
COMMD4-220ENST00000567720 TNIP3Q96KP6 325 aa18.33■□□□□ 0.52
COMMD4-220ENST00000567720 CORO1BQ9BR76 489 aa18.33■□□□□ 0.52
COMMD4-220ENST00000567720 B3GNT5Q9BYG0 378 aa18.33■□□□□ 0.52
COMMD4-220ENST00000567720 NDST4Q9H3R1 872 aa18.33■□□□□ 0.52
COMMD4-220ENST00000567720 TAB2Q9NYJ8 693 aa18.33■□□□□ 0.52
COMMD4-220ENST00000567720 KIF26AQ9ULI4 1882 aaPredicted RBP18.33■□□□□ 0.52
COMMD4-220ENST00000567720 GTPBP10A4D1E9 387 aaKnown RBP18.32■□□□□ 0.52
COMMD4-220ENST00000567720 CLDN5O00501 218 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 CCDC130P13994 396 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 BDNFP23560 247 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 CCR2P41597 374 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 MAGEA11P43364 429 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 EPHB3P54753 998 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 EPHA5P54756 1037 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 APBA1Q02410 837 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 KRT31Q15323 416 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 VWA3BQ502W6 1294 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 PRSS36Q5K4E3 855 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 TRIM65Q6PJ69 517 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 FUKQ8N0W3 1084 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 CRYBG2Q8N1P7 616 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 ELMOD1Q8N336 334 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 PPM1KQ8N3J5 372 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 C12orf29Q8N999 325 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 TDRD5Q8NAT2 981 aaKnown RBP18.32■□□□□ 0.52
COMMD4-220ENST00000567720 EHBP1Q8NDI1 1231 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 ITFG1Q8TB96 612 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 GPR152Q8TDT2 470 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 PSMG2Q969U7 264 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 MYADMQ96S97 322 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 NT5C1AQ9BXI3 368 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 COL25A1Q9BXS0 654 aaPredicted RBP18.32■□□□□ 0.52
COMMD4-220ENST00000567720 LRRC3Q9BY71 257 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 ZNF334Q9HCZ1 680 aaPredicted RBP18.32■□□□□ 0.52
COMMD4-220ENST00000567720 FAM49BQ9NUQ9 324 aa18.32■□□□□ 0.52
COMMD4-220ENST00000567720 FSHRP23945 695 aa18.31■□□□□ 0.52
COMMD4-220ENST00000567720 TBXAS1P24557 533 aaPredicted RBP18.31■□□□□ 0.52
COMMD4-220ENST00000567720 DDR2Q16832 855 aa18.31■□□□□ 0.52
COMMD4-220ENST00000567720 ZNF394Q53GI3 561 aa18.31■□□□□ 0.52
COMMD4-220ENST00000567720 PAQR9Q6ZVX9 377 aa18.31■□□□□ 0.52
COMMD4-220ENST00000567720 SLC4A11Q8NBS3 891 aa18.31■□□□□ 0.52
COMMD4-220ENST00000567720 GIPC2Q8TF65 315 aa18.31■□□□□ 0.52
COMMD4-220ENST00000567720 ING5Q8WYH8 240 aa18.31■□□□□ 0.52
COMMD4-220ENST00000567720 TCEAL4Q96EI5 215 aa18.31■□□□□ 0.52
COMMD4-220ENST00000567720 KREMEN1Q96MU8 473 aa18.31■□□□□ 0.52
COMMD4-220ENST00000567720 NAT10Q9H0A0 1025 aaKnown RBP18.31■□□□□ 0.52
COMMD4-220ENST00000567720 FAM124BQ9H5Z6 455 aaPredicted RBP18.31■□□□□ 0.52
COMMD4-220ENST00000567720 AVENQ9NQS1 362 aaPredicted RBP18.31■□□□□ 0.52
COMMD4-220ENST00000567720 ASAH2Q9NR71 780 aa18.31■□□□□ 0.52
COMMD4-220ENST00000567720 KRT82Q9NSB4 513 aa18.31■□□□□ 0.52
COMMD4-220ENST00000567720 USTQ9Y2C2 406 aa18.31■□□□□ 0.52
COMMD4-220ENST00000567720 CEBPBP17676 345 aa18.3■□□□□ 0.52
COMMD4-220ENST00000567720 PTPN2P17706 415 aa18.3■□□□□ 0.52
COMMD4-220ENST00000567720 SLC9A1P19634 815 aa18.3■□□□□ 0.52
COMMD4-220ENST00000567720 ACO1P21399 889 aaKnown RBP18.3■□□□□ 0.52
COMMD4-220ENST00000567720 ZNF165P49910 485 aa18.3■□□□□ 0.52
COMMD4-220ENST00000567720 RAD23BP54727 409 aa18.3■□□□□ 0.52
COMMD4-220ENST00000567720 GCNT1Q02742 428 aa18.3■□□□□ 0.52
COMMD4-220ENST00000567720 VEPH1Q14D04 833 aa18.3■□□□□ 0.52
COMMD4-220ENST00000567720 EXOC3L4Q17RC7 722 aa18.3■□□□□ 0.52
COMMD4-220ENST00000567720 IQCEQ6IPM2 695 aa18.3■□□□□ 0.52
COMMD4-220ENST00000567720 PHLDB3Q6NSJ2 640 aa18.3■□□□□ 0.52
COMMD4-220ENST00000567720 GJB7Q6PEY0 223 aa18.3■□□□□ 0.52
COMMD4-220ENST00000567720 VSTM1Q6UX27 236 aa18.3■□□□□ 0.52
COMMD4-220ENST00000567720 GBP6Q6ZN66 633 aa18.3■□□□□ 0.52
COMMD4-220ENST00000567720 RRAGAQ7L523 313 aa18.3■□□□□ 0.52
COMMD4-220ENST00000567720 SCN4BQ8IWT1 228 aa18.3■□□□□ 0.52
COMMD4-220ENST00000567720 NPAS3Q8IXF0 933 aa18.3■□□□□ 0.52
COMMD4-220ENST00000567720 TTC39CQ8N584 583 aa18.3■□□□□ 0.52
COMMD4-220ENST00000567720 FAM200AQ8TCP9 573 aa18.3■□□□□ 0.52
COMMD4-220ENST00000567720 SLC2A14Q8TDB8 520 aa18.3■□□□□ 0.52
COMMD4-220ENST00000567720 ZNF512Q96ME7 567 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms