RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 RBM20Q5T481 1227 aaKnown RBP5.87□□□□□ -1.47
SHCBP1-206ENST00000567698 HIBCHQ6NVY1 386 aaPredicted RBP5.87□□□□□ -1.47
SHCBP1-206ENST00000567698 VWA1Q6PCB0 445 aa5.87□□□□□ -1.47
SHCBP1-206ENST00000567698 ZNF627Q7L945 461 aa5.87□□□□□ -1.47
SHCBP1-206ENST00000567698 SPICE1Q8N0Z3 855 aa5.87□□□□□ -1.47
SHCBP1-206ENST00000567698 ATP11CQ8NB49 1132 aa5.87□□□□□ -1.47
SHCBP1-206ENST00000567698 SLC30A5Q8TAD4 765 aa5.87□□□□□ -1.47
SHCBP1-206ENST00000567698 PMM1Q92871 262 aa5.87□□□□□ -1.47
SHCBP1-206ENST00000567698 KIAA1191Q96A73 305 aa5.87□□□□□ -1.47
SHCBP1-206ENST00000567698 MYD88Q99836 296 aa5.87□□□□□ -1.47
SHCBP1-206ENST00000567698 PTDSS2Q9BVG9 487 aa5.87□□□□□ -1.47
SHCBP1-206ENST00000567698 MID2Q9UJV3 735 aa5.87□□□□□ -1.47
SHCBP1-206ENST00000567698 NDRG4Q9ULP0 352 aaKnown RBP5.87□□□□□ -1.47
SHCBP1-206ENST00000567698 CAPN11Q9UMQ6 739 aa5.87□□□□□ -1.47
SHCBP1-206ENST00000567698 MRPS17Q9Y2R5 130 aaKnown RBP5.87□□□□□ -1.47
SHCBP1-206ENST00000567698 TRGV11A0A075B6L2 103 aa5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 WDR27A2RRH5 827 aa5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 VWC2LB2RUY7 222 aa5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 MYO1CO00159 1063 aa5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 FGF18O76093 207 aa5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 ERBB2P04626 1255 aa5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 IFIT2P09913 472 aaKnown RBP5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 BTF3P20290 206 aaKnown RBP5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 ITGALP20701 1170 aa5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 PPIFP30405 207 aaKnown RBP5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 PXNP49023 591 aaPredicted RBP5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 CARSP49589 748 aaKnown RBP5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 DGKEP52429 567 aa5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 SF3B3Q15393 1217 aaKnown RBP5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 FAM209BQ5JX69 171 aa5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 KCNV1Q6PIU1 500 aa5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 KCTD20Q7Z5Y7 419 aa5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 COLGALT2Q8IYK4 626 aa5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 SYNE4Q8N205 404 aa5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 VGLL2Q8N8G2 317 aa5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 DEPTORQ8TB45 409 aa5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 LINC00476Q8WZB0 136 aa5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 LARP4BQ92615 738 aaKnown RBP5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 MOGAT1Q96PD6 335 aa5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 STK31Q9BXU1 1019 aa5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 DHX36Q9H2U1 1008 aaKnown RBP5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 NLRC4Q9NPP4 1024 aa5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 TAGLN3Q9UI15 199 aa5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 PADI4Q9UM07 663 aa5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 SHOC2Q9UQ13 582 aa5.86□□□□□ -1.47
SHCBP1-206ENST00000567698 CLCA1A8K7I4 914 aa5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 F5H697 171 aa5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 PPFIA4O75335 1185 aa5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 PEX14O75381 377 aa5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 ZNF202O95125 648 aa5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 XRCC6P12956 609 aaKnown RBP eCLIP5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 CD6P30203 668 aa5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 PUM1Q14671 1186 aaKnown RBP eCLIP5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 SLC35G1Q2M3R5 365 aa5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 ZXDCQ2QGD7 858 aaPredicted RBP5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 LY6G5CQ5SRR4 150 aa5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 ABHD17BQ5VST6 288 aa5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 IZUMO3Q5VZ72 239 aa5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 KIAA0895LQ68EN5 471 aa5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 Q6YL49 198 aa5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 TSHZ1Q6ZSZ6 1077 aa5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 VRK3Q8IV63 474 aa5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 FAM186BQ8IYM0 893 aa5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 MYCBPAPQ8TBZ2 947 aa5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 BRI3BPQ8WY22 251 aa5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 RPS6KC1Q96S38 1066 aa5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 MPHOSPH6Q99547 160 aaKnown RBP5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 ALG13Q9NP73 1137 aaKnown RBP5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 DKK4Q9UBT3 224 aa5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 CDY1Q9Y6F8 540 aa5.85□□□□□ -1.47
SHCBP1-206ENST00000567698 MAST3O60307 1309 aa5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 LOC102723971A0A1B0GUV8 181 aa5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 H7C4K7 107 aa5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 APOL1O14791 398 aa5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 CCP110O43303 1012 aa5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 RRP9O43818 475 aaKnown RBP5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 ITGAMP11215 1152 aa5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 HARSP12081 509 aaKnown RBP5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 TGM1P22735 817 aa5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 ACVR2AP27037 513 aa5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 IL1R2P27930 398 aa5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 LRPAP1P30533 357 aa5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 IL6STP40189 918 aaPredicted RBP5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 MORC3Q14149 939 aa5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 PTCHD3Q3KNS1 767 aa5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 PREPLQ4J6C6 727 aaPredicted RBP5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 DGKKQ5KSL6 1271 aa5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 ARHGAP40Q5TG30 622 aa5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 SKAP1Q86WV1 359 aa5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 CCDC33Q8N5R6 958 aa5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 BPIFB1Q8TDL5 484 aa5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 FAM136AQ96C01 138 aa5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 IQCDQ96DY2 449 aa5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 PTCD3Q96EY7 689 aaKnown RBP5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 Q96MF0 132 aa5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 ZNF341Q9BYN7 854 aa5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 KCTD5Q9NXV2 234 aa5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 REXO2Q9Y3B8 237 aaKnown RBP5.84□□□□□ -1.47
SHCBP1-206ENST00000567698 ADGRA2Q96PE1 1338 aa5.83□□□□□ -1.48
SHCBP1-206ENST00000567698 ABHD14A-ACY1A0A1B0GW23 586 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms