RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 BACH2Q9BYV9 841 aa16.4■□□□□ 0.22
CDR2-206ENST00000567406 TMEM206Q9H813 350 aa16.4■□□□□ 0.22
CDR2-206ENST00000567406 TRPC7Q9HCX4 862 aa16.4■□□□□ 0.22
CDR2-206ENST00000567406 TDP1Q9NUW8 608 aa16.4■□□□□ 0.22
CDR2-206ENST00000567406 INTS13Q9NVM9 706 aa16.4■□□□□ 0.22
CDR2-206ENST00000567406 GDAP2Q9NXN4 497 aa16.4■□□□□ 0.22
CDR2-206ENST00000567406 DLL3Q9NYJ7 618 aa16.4■□□□□ 0.22
CDR2-206ENST00000567406 OBSL1O75147 1896 aa16.39■□□□□ 0.22
CDR2-206ENST00000567406 CLIC2O15247 247 aa16.39■□□□□ 0.21
CDR2-206ENST00000567406 PDGFRBP09619 1106 aa16.39■□□□□ 0.21
CDR2-206ENST00000567406 CSH1P0DML2 217 aa16.39■□□□□ 0.21
CDR2-206ENST00000567406 CSH2P0DML3 217 aa16.39■□□□□ 0.21
CDR2-206ENST00000567406 ASIC1P78348 528 aa16.39■□□□□ 0.21
CDR2-206ENST00000567406 PLCB2Q00722 1185 aa16.39■□□□□ 0.21
CDR2-206ENST00000567406 MYL7Q01449 175 aa16.39■□□□□ 0.21
CDR2-206ENST00000567406 ALCAMQ13740 583 aa16.39■□□□□ 0.21
CDR2-206ENST00000567406 RUNX3Q13761 415 aa16.39■□□□□ 0.21
CDR2-206ENST00000567406 CCINQ13939 588 aa16.39■□□□□ 0.21
CDR2-206ENST00000567406 SIM2Q14190 667 aaPredicted RBP16.39■□□□□ 0.21
CDR2-206ENST00000567406 NFE2Q16621 373 aaPredicted RBP16.39■□□□□ 0.21
CDR2-206ENST00000567406 DGKKQ5KSL6 1271 aa16.39■□□□□ 0.21
CDR2-206ENST00000567406 SHC4Q6S5L8 630 aa16.39■□□□□ 0.21
CDR2-206ENST00000567406 SPATA2LQ8IUW3 424 aaPredicted RBP16.39■□□□□ 0.21
CDR2-206ENST00000567406 NELFCDQ8IXH7 590 aa16.39■□□□□ 0.21
CDR2-206ENST00000567406 TMEM86AQ8N2M4 240 aa16.39■□□□□ 0.21
CDR2-206ENST00000567406 MRPS31Q92665 395 aaKnown RBP16.39■□□□□ 0.21
CDR2-206ENST00000567406 HPDLQ96IR7 371 aa16.39■□□□□ 0.21
CDR2-206ENST00000567406 ANKRD36BP1Q96IX9 119 aa16.39■□□□□ 0.21
CDR2-206ENST00000567406 TRIM9Q9C026 710 aa16.39■□□□□ 0.21
CDR2-206ENST00000567406 FBRSL1Q9HCM7 1045 aaKnown RBP16.39■□□□□ 0.21
CDR2-206ENST00000567406 HSPBP1Q9NZL4 362 aa16.39■□□□□ 0.21
CDR2-206ENST00000567406 GMEB2Q9UKD1 530 aa16.39■□□□□ 0.21
CDR2-206ENST00000567406 RAB23Q9ULC3 237 aa16.39■□□□□ 0.21
CDR2-206ENST00000567406 MORC2Q9Y6X9 1032 aaPredicted RBP16.39■□□□□ 0.21
CDR2-206ENST00000567406 NCOR2Q9Y618 2525 aa16.39■□□□□ 0.21
CDR2-206ENST00000567406 ZNF233A6NK53 670 aa16.38■□□□□ 0.21
CDR2-206ENST00000567406 GABRDO14764 452 aa16.38■□□□□ 0.21
CDR2-206ENST00000567406 ATXN1P54253 815 aaKnown RBP16.38■□□□□ 0.21
CDR2-206ENST00000567406 FSTL4Q6MZW2 842 aa16.38■□□□□ 0.21
CDR2-206ENST00000567406 MON1AQ86VX9 555 aa16.38■□□□□ 0.21
CDR2-206ENST00000567406 TOP6BLQ8N6T0 577 aa16.38■□□□□ 0.21
CDR2-206ENST00000567406 LEO1Q8WVC0 666 aaPredicted RBP16.38■□□□□ 0.21
CDR2-206ENST00000567406 KBTBD7Q8WVZ9 684 aa16.38■□□□□ 0.21
CDR2-206ENST00000567406 BLZF1Q9H2G9 400 aa16.38■□□□□ 0.21
CDR2-206ENST00000567406 TNMDQ9H2S6 317 aa16.38■□□□□ 0.21
CDR2-206ENST00000567406 KBTBD4Q9NVX7 518 aa16.38■□□□□ 0.21
CDR2-206ENST00000567406 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.38■□□□□ 0.21
CDR2-206ENST00000567406 C2orf78A6NCI8 922 aa16.37■□□□□ 0.21
CDR2-206ENST00000567406 NOL4O94818 638 aa16.37■□□□□ 0.21
CDR2-206ENST00000567406 CST3P01034 146 aaPredicted RBP16.37■□□□□ 0.21
CDR2-206ENST00000567406 EGFP01133 1207 aa16.37■□□□□ 0.21
CDR2-206ENST00000567406 TNNC2P02585 160 aa16.37■□□□□ 0.21
CDR2-206ENST00000567406 DLATP10515 647 aaKnown RBP16.37■□□□□ 0.21
CDR2-206ENST00000567406 BDNFP23560 247 aa16.37■□□□□ 0.21
CDR2-206ENST00000567406 LHX1P48742 406 aa16.37■□□□□ 0.21
CDR2-206ENST00000567406 CYP2J2P51589 502 aa16.37■□□□□ 0.21
CDR2-206ENST00000567406 RPL10AP62906 217 aaKnown RBP16.37■□□□□ 0.21
CDR2-206ENST00000567406 DUOXA2Q1HG44 320 aa16.37■□□□□ 0.21
CDR2-206ENST00000567406 C1orf228Q6PIY5 440 aa16.37■□□□□ 0.21
CDR2-206ENST00000567406 LONP2Q86WA8 852 aa16.37■□□□□ 0.21
CDR2-206ENST00000567406 ARL14EPQ8N8R7 260 aaPredicted RBP16.37■□□□□ 0.21
CDR2-206ENST00000567406 MYLPFQ96A32 169 aa16.37■□□□□ 0.21
CDR2-206ENST00000567406 SYT15Q9BQS2 421 aa16.37■□□□□ 0.21
CDR2-206ENST00000567406 ABCB6Q9NP58 842 aa16.37■□□□□ 0.21
CDR2-206ENST00000567406 CRTAC1Q9NQ79 661 aa16.37■□□□□ 0.21
CDR2-206ENST00000567406 R3HCC1Q9Y3T6 440 aaKnown RBP16.37■□□□□ 0.21
CDR2-206ENST00000567406 NME7Q9Y5B8 376 aa16.37■□□□□ 0.21
CDR2-206ENST00000567406 DCDC2BA2VCK2 349 aa16.36■□□□□ 0.21
CDR2-206ENST00000567406 TGFB1I1O43294 461 aa16.36■□□□□ 0.21
CDR2-206ENST00000567406 DDX6P26196 483 aaKnown RBP eCLIP16.36■□□□□ 0.21
CDR2-206ENST00000567406 PCSK1P29120 753 aa16.36■□□□□ 0.21
CDR2-206ENST00000567406 GALK1P51570 392 aa16.36■□□□□ 0.21
CDR2-206ENST00000567406 CYP27A1Q02318 531 aa16.36■□□□□ 0.21
CDR2-206ENST00000567406 MYO1EQ12965 1108 aa16.36■□□□□ 0.21
CDR2-206ENST00000567406 TMEM196Q5HYL7 178 aa16.36■□□□□ 0.21
CDR2-206ENST00000567406 LAIR1Q6GTX8 287 aa16.36■□□□□ 0.21
CDR2-206ENST00000567406 CC2D1AQ6P1N0 951 aaPredicted RBP16.36■□□□□ 0.21
CDR2-206ENST00000567406 FAM171BQ6P995 826 aa16.36■□□□□ 0.21
CDR2-206ENST00000567406 EPM2AIP1Q7L775 607 aaPredicted RBP16.36■□□□□ 0.21
CDR2-206ENST00000567406 ZNF507Q8TCN5 953 aa16.36■□□□□ 0.21
CDR2-206ENST00000567406 CCDC127Q96BQ5 260 aa16.36■□□□□ 0.21
CDR2-206ENST00000567406 ZNF396Q96N95 335 aaPredicted RBP16.36■□□□□ 0.21
CDR2-206ENST00000567406 MMS19Q96T76 1030 aa16.36■□□□□ 0.21
CDR2-206ENST00000567406 MRPL45Q9BRJ2 306 aaKnown RBP16.36■□□□□ 0.21
CDR2-206ENST00000567406 AGPAT3Q9NRZ7 376 aa16.36■□□□□ 0.21
CDR2-206ENST00000567406 MAGEC2Q9UBF1 373 aaPredicted RBP16.36■□□□□ 0.21
CDR2-206ENST00000567406 WNT6Q9Y6F9 365 aa16.36■□□□□ 0.21
CDR2-206ENST00000567406 RALGAPA1Q6GYQ0 2036 aa16.35■□□□□ 0.21
CDR2-206ENST00000567406 POLR2DO15514 142 aaKnown RBP16.35■□□□□ 0.21
CDR2-206ENST00000567406 CUTAO60888 179 aa16.35■□□□□ 0.21
CDR2-206ENST00000567406 PPP6R2O75170 966 aa16.35■□□□□ 0.21
CDR2-206ENST00000567406 PAPSS2O95340 614 aaPredicted RBP16.35■□□□□ 0.21
CDR2-206ENST00000567406 USP46P62068 366 aa16.35■□□□□ 0.21
CDR2-206ENST00000567406 GRSF1Q12849 480 aaKnown RBP eCLIP16.35■□□□□ 0.21
CDR2-206ENST00000567406 MTF1Q14872 753 aa16.35■□□□□ 0.21
CDR2-206ENST00000567406 CCDC6Q16204 474 aa16.35■□□□□ 0.21
CDR2-206ENST00000567406 CFAP221Q4G0U5 840 aa16.35■□□□□ 0.21
CDR2-206ENST00000567406 FAM26FQ5R3K3 315 aa16.35■□□□□ 0.21
CDR2-206ENST00000567406 STXBP4Q6ZWJ1 553 aa16.35■□□□□ 0.21
CDR2-206ENST00000567406 CEP68Q76N32 757 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms