RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 PCED1BQ96HM7 432 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 CEP295NLQ96MC4 621 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 APOL5Q9BWW9 433 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 HSD3B7Q9H2F3 369 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 DPEP3Q9H4B8 488 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 PRDM6Q9NQX0 595 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 HMGXB4Q9UGU5 601 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 USP15Q9Y4E8 981 aaPredicted RBP12.95□□□□□ -0.34
SF3B3-208ENST00000567250 ASB3Q9Y575 518 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 GREB1Q4ZG55 1949 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 OBSL1O75147 1896 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 MYBPHLA2RUH7 354 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 LRRC10BA6NIK2 292 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 CCL16O15467 120 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 HCRTO43612 131 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 ATP2C2O75185 946 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 SLC34A2O95436 690 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 SEC24AO95486 1093 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 TPM3P06753 285 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 ATP1A3P13637 1013 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 SLC9A1P19634 815 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 PON1P27169 355 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 TFF2Q03403 129 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 UBXN1Q04323 297 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 TAF12Q16514 161 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 TMEM270Q6UE05 265 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 RRAGAQ7L523 313 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 ACOT1Q86TX2 421 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 ARHGEF19Q8IW93 802 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.94□□□□□ -0.34
SF3B3-208ENST00000567250 C12orf76Q8N812 135 aaPredicted RBP12.94□□□□□ -0.34
SF3B3-208ENST00000567250 SPOCK2Q92563 424 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 SMARCD1Q96GM5 515 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 TMEM176AQ96HP8 235 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 ZNF512Q96ME7 567 aaPredicted RBP12.94□□□□□ -0.34
SF3B3-208ENST00000567250 MED10Q9BTT4 135 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 S1PR5Q9H228 398 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 UBE2TQ9NPD8 197 aaPredicted RBP12.94□□□□□ -0.34
SF3B3-208ENST00000567250 PLCB1Q9NQ66 1216 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 TMLHEQ9NVH6 421 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 EHD2Q9NZN4 543 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 NME7Q9Y5B8 376 aa12.94□□□□□ -0.34
SF3B3-208ENST00000567250 CLUHO75153 1309 aa12.93□□□□□ -0.34
SF3B3-208ENST00000567250 VNN2O95498 520 aa12.93□□□□□ -0.34
SF3B3-208ENST00000567250 FGF19O95750 216 aa12.93□□□□□ -0.34
SF3B3-208ENST00000567250 PAEPP09466 180 aa12.93□□□□□ -0.34
SF3B3-208ENST00000567250 SLC8A3P57103 927 aa12.93□□□□□ -0.34
SF3B3-208ENST00000567250 SMAD2Q15796 467 aaKnown RBP12.93□□□□□ -0.34
SF3B3-208ENST00000567250 ZNF394Q53GI3 561 aa12.93□□□□□ -0.34
SF3B3-208ENST00000567250 SGO2Q562F6 1265 aa12.93□□□□□ -0.34
SF3B3-208ENST00000567250 PHLDB3Q6NSJ2 640 aa12.93□□□□□ -0.34
SF3B3-208ENST00000567250 FAM35AQ86V20 835 aa12.93□□□□□ -0.34
SF3B3-208ENST00000567250 SCN4BQ8IWT1 228 aa12.93□□□□□ -0.34
SF3B3-208ENST00000567250 UBR7Q8N806 425 aa12.93□□□□□ -0.34
SF3B3-208ENST00000567250 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.93□□□□□ -0.34
SF3B3-208ENST00000567250 SUSD6Q92537 303 aa12.93□□□□□ -0.34
SF3B3-208ENST00000567250 ZNF707Q96C28 371 aaPredicted RBP12.93□□□□□ -0.34
SF3B3-208ENST00000567250 PCMTD1Q96MG8 357 aaPredicted RBP12.93□□□□□ -0.34
SF3B3-208ENST00000567250 LSM14BQ9BX40 385 aaKnown RBP12.93□□□□□ -0.34
SF3B3-208ENST00000567250 CRISPLD1Q9H336 500 aa12.93□□□□□ -0.34
SF3B3-208ENST00000567250 DMAP1Q9NPF5 467 aaPredicted RBP12.93□□□□□ -0.34
SF3B3-208ENST00000567250 ASAH2Q9NR71 780 aa12.93□□□□□ -0.34
SF3B3-208ENST00000567250 FAM49BQ9NUQ9 324 aa12.93□□□□□ -0.34
SF3B3-208ENST00000567250 KIAA1257Q9ULG3 409 aa12.93□□□□□ -0.34
SF3B3-208ENST00000567250 SLC27A5Q9Y2P5 690 aa12.93□□□□□ -0.34
SF3B3-208ENST00000567250 PCDHB4Q9Y5E5 795 aa12.93□□□□□ -0.34
SF3B3-208ENST00000567250 DENND4CQ5VZ89 1909 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 A0A1B0GTH6 734 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 GRXCR2A6NFK2 248 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 FAM200BP0CF97 657 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 CSH1P0DML2 217 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 CSH2P0DML3 217 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 KRT5P13647 590 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 CD19P15391 556 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 PTPN2P17706 415 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 ATF6P18850 670 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 BDNFP23560 247 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 CYP2F1P24903 491 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 GRIK1P39086 918 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 RAD23BP54727 409 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 ORC1Q13415 861 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 RAPGEF1Q13905 1077 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 STILQ15468 1287 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 CCDC142Q17RM4 750 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 PABPC1LQ4VXU2 614 aaKnown RBP12.92□□□□□ -0.34
SF3B3-208ENST00000567250 PDZD4Q76G19 769 aaPredicted RBP12.92□□□□□ -0.34
SF3B3-208ENST00000567250 APTXQ7Z2E3 356 aaKnown RBP12.92□□□□□ -0.34
SF3B3-208ENST00000567250 TTC9BQ8N6N2 239 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 SLC4A11Q8NBS3 891 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 RBBP8NLQ8NC74 664 aaPredicted RBP12.92□□□□□ -0.34
SF3B3-208ENST00000567250 NEK11Q8NG66 645 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 SLC2A14Q8TDB8 520 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 WHAMMQ8TF30 809 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 KAT5Q92993 513 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 PSMG2Q969U7 264 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 HEXIM2Q96MH2 286 aaKnown RBP12.92□□□□□ -0.34
SF3B3-208ENST00000567250 ASB2Q96Q27 587 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 GCNAQ96QF7 691 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 ERGIC2Q96RQ1 377 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 TWNKQ96RR1 684 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms