RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 CLIC2O15247 247 aa21.61■■□□□ 1.05
CLN6-207ENST00000566347 SLFN14P0C7P3 912 aa21.61■■□□□ 1.05
CLN6-207ENST00000566347 GPR15P49685 360 aa21.61■■□□□ 1.05
CLN6-207ENST00000566347 LRRC32Q14392 662 aa21.61■■□□□ 1.05
CLN6-207ENST00000566347 MAPRE1Q15691 268 aaKnown RBP21.61■■□□□ 1.05
CLN6-207ENST00000566347 DDR2Q16832 855 aa21.61■■□□□ 1.05
CLN6-207ENST00000566347 FAM171BQ6P995 826 aa21.61■■□□□ 1.05
CLN6-207ENST00000566347 C4orf50Q6ZRC1 276 aa21.61■■□□□ 1.05
CLN6-207ENST00000566347 TMEM150AQ86TG1 271 aa21.61■■□□□ 1.05
CLN6-207ENST00000566347 RALGPS2Q86X27 583 aaPredicted RBP21.61■■□□□ 1.05
CLN6-207ENST00000566347 GOLGA5Q8TBA6 731 aa21.61■■□□□ 1.05
CLN6-207ENST00000566347 KBTBD7Q8WVZ9 684 aa21.61■■□□□ 1.05
CLN6-207ENST00000566347 TRMT2BQ96GJ1 504 aaKnown RBP21.61■■□□□ 1.05
CLN6-207ENST00000566347 CGRRF1Q99675 332 aa21.61■■□□□ 1.05
CLN6-207ENST00000566347 CDH9Q9ULB4 789 aa21.61■■□□□ 1.05
CLN6-207ENST00000566347 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.6■■□□□ 1.05
CLN6-207ENST00000566347 MYBPHLA2RUH7 354 aa21.6■■□□□ 1.05
CLN6-207ENST00000566347 NOL4O94818 638 aa21.6■■□□□ 1.05
CLN6-207ENST00000566347 MAGEA11P43364 429 aa21.6■■□□□ 1.05
CLN6-207ENST00000566347 KNOP1Q1ED39 458 aaKnown RBP21.6■■□□□ 1.05
CLN6-207ENST00000566347 MAB21L3Q8N8X9 362 aa21.6■■□□□ 1.05
CLN6-207ENST00000566347 ZBTB44Q8NCP5 570 aa21.6■■□□□ 1.05
CLN6-207ENST00000566347 NELL1Q92832 810 aa21.6■■□□□ 1.05
CLN6-207ENST00000566347 CCDC127Q96BQ5 260 aa21.6■■□□□ 1.05
CLN6-207ENST00000566347 ZFYVE19Q96K21 471 aa21.6■■□□□ 1.05
CLN6-207ENST00000566347 MYRFLQ96LU7 910 aa21.6■■□□□ 1.05
CLN6-207ENST00000566347 MMS19Q96T76 1030 aa21.6■■□□□ 1.05
CLN6-207ENST00000566347 SYT15Q9BQS2 421 aa21.6■■□□□ 1.05
CLN6-207ENST00000566347 KIF9Q9HAQ2 790 aa21.6■■□□□ 1.05
CLN6-207ENST00000566347 OBSL1O75147 1896 aa21.6■■□□□ 1.05
CLN6-207ENST00000566347 ZNF638Q14966 1978 aaKnown RBP21.59■■□□□ 1.05
CLN6-207ENST00000566347 SPECC1L-ADORA2AF8WAN1 911 aa21.59■■□□□ 1.05
CLN6-207ENST00000566347 CHRNB1P11230 501 aa21.59■■□□□ 1.05
CLN6-207ENST00000566347 WARSP23381 471 aaKnown RBP21.59■■□□□ 1.05
CLN6-207ENST00000566347 CTHP32929 405 aa21.59■■□□□ 1.05
CLN6-207ENST00000566347 CCR3P51677 355 aa21.59■■□□□ 1.05
CLN6-207ENST00000566347 OTOGLQ3ZCN5 2332 aa21.59■■□□□ 1.05
CLN6-207ENST00000566347 SDHAF4Q5VUM1 108 aa21.59■■□□□ 1.05
CLN6-207ENST00000566347 MON1AQ86VX9 555 aa21.59■■□□□ 1.05
CLN6-207ENST00000566347 SMG9Q9H0W8 520 aaKnown RBP21.59■■□□□ 1.05
CLN6-207ENST00000566347 GTSE1Q9NYZ3 720 aa21.59■■□□□ 1.05
CLN6-207ENST00000566347 USP25Q9UHP3 1055 aa21.59■■□□□ 1.05
CLN6-207ENST00000566347 SERTAD1Q9UHV2 236 aa21.59■■□□□ 1.05
CLN6-207ENST00000566347 FRYLO94915 3013 aa21.58■■□□□ 1.05
CLN6-207ENST00000566347 HCRTO43612 131 aa21.58■■□□□ 1.05
CLN6-207ENST00000566347 ACTN4O43707 911 aaKnown RBP21.58■■□□□ 1.05
CLN6-207ENST00000566347 EXOC3O60645 756 aa21.58■■□□□ 1.05
CLN6-207ENST00000566347 FAM163BP0C2L3 166 aa21.58■■□□□ 1.05
CLN6-207ENST00000566347 SOX9P48436 509 aa21.58■■□□□ 1.05
CLN6-207ENST00000566347 NRLP54845 237 aa21.58■■□□□ 1.05
CLN6-207ENST00000566347 ITPRIPL2Q3MIP1 535 aa21.58■■□□□ 1.05
CLN6-207ENST00000566347 DGKKQ5KSL6 1271 aa21.58■■□□□ 1.05
CLN6-207ENST00000566347 TXNDC8Q6A555 127 aa21.58■■□□□ 1.05
CLN6-207ENST00000566347 VSTM1Q6UX27 236 aa21.58■■□□□ 1.05
CLN6-207ENST00000566347 SCN4BQ8IWT1 228 aa21.58■■□□□ 1.05
CLN6-207ENST00000566347 GRAMD1CQ8IYS0 662 aa21.58■■□□□ 1.05
CLN6-207ENST00000566347 RUBCNQ92622 972 aa21.58■■□□□ 1.05
CLN6-207ENST00000566347 PAGE5Q96GU1 130 aa21.58■■□□□ 1.05
CLN6-207ENST00000566347 CEP295NLQ96MC4 621 aa21.58■■□□□ 1.05
CLN6-207ENST00000566347 HINFPQ9BQA5 517 aa21.58■■□□□ 1.05
CLN6-207ENST00000566347 TDP1Q9NUW8 608 aa21.58■■□□□ 1.05
CLN6-207ENST00000566347 EXOC1Q9NV70 894 aa21.58■■□□□ 1.05
CLN6-207ENST00000566347 MAGEC2Q9UBF1 373 aaPredicted RBP21.58■■□□□ 1.05
CLN6-207ENST00000566347 KIF26AQ9ULI4 1882 aaPredicted RBP21.58■■□□□ 1.04
CLN6-207ENST00000566347 TACC1O75410 805 aa21.57■■□□□ 1.04
CLN6-207ENST00000566347 CST3P01034 146 aaPredicted RBP21.57■■□□□ 1.04
CLN6-207ENST00000566347 MYL1P05976 194 aa21.57■■□□□ 1.04
CLN6-207ENST00000566347 CMA1P23946 247 aa21.57■■□□□ 1.04
CLN6-207ENST00000566347 LMO2P25791 158 aa21.57■■□□□ 1.04
CLN6-207ENST00000566347 PSMC1P62191 440 aaKnown RBP21.57■■□□□ 1.04
CLN6-207ENST00000566347 TNNC1P63316 161 aa21.57■■□□□ 1.04
CLN6-207ENST00000566347 KRT85P78386 507 aa21.57■■□□□ 1.04
CLN6-207ENST00000566347 PSMD2Q13200 908 aa21.57■■□□□ 1.04
CLN6-207ENST00000566347 TRPC3Q13507 836 aa21.57■■□□□ 1.04
CLN6-207ENST00000566347 ZNF268Q14587 947 aaPredicted RBP21.57■■□□□ 1.04
CLN6-207ENST00000566347 CCDC142Q17RM4 750 aa21.57■■□□□ 1.04
CLN6-207ENST00000566347 TSSK4Q6SA08 328 aa21.57■■□□□ 1.04
CLN6-207ENST00000566347 FSIP1Q8NA03 581 aa21.57■■□□□ 1.04
CLN6-207ENST00000566347 SUMF1Q8NBK3 374 aa21.57■■□□□ 1.04
CLN6-207ENST00000566347 STKLD1Q8NE28 680 aa21.57■■□□□ 1.04
CLN6-207ENST00000566347 TTC8Q8TAM2 541 aa21.57■■□□□ 1.04
CLN6-207ENST00000566347 USP13Q92995 863 aaPredicted RBP21.57■■□□□ 1.04
CLN6-207ENST00000566347 SNX25Q9H3E2 840 aa21.57■■□□□ 1.04
CLN6-207ENST00000566347 KLRC4O43908 158 aa21.56■■□□□ 1.04
CLN6-207ENST00000566347 LILRB5O75023 590 aa21.56■■□□□ 1.04
CLN6-207ENST00000566347 ATP2C2O75185 946 aa21.56■■□□□ 1.04
CLN6-207ENST00000566347 STAU1O95793 577 aaKnown RBP21.56■■□□□ 1.04
CLN6-207ENST00000566347 PDGFRBP09619 1106 aa21.56■■□□□ 1.04
CLN6-207ENST00000566347 PFKFB1P16118 471 aa21.56■■□□□ 1.04
CLN6-207ENST00000566347 ATICP31939 592 aa21.56■■□□□ 1.04
CLN6-207ENST00000566347 GNL1P36915 607 aaPredicted RBP21.56■■□□□ 1.04
CLN6-207ENST00000566347 TNK2Q07912 1038 aa21.56■■□□□ 1.04
CLN6-207ENST00000566347 TXNDC11Q6PKC3 985 aa21.56■■□□□ 1.04
CLN6-207ENST00000566347 SPEM1Q8N4L4 309 aa21.56■■□□□ 1.04
CLN6-207ENST00000566347 MYLPFQ96A32 169 aa21.56■■□□□ 1.04
CLN6-207ENST00000566347 SPATA17Q96L03 361 aa21.56■■□□□ 1.04
CLN6-207ENST00000566347 SPATA32Q96LK8 384 aa21.56■■□□□ 1.04
CLN6-207ENST00000566347 FAM83CQ9BQN1 747 aa21.56■■□□□ 1.04
CLN6-207ENST00000566347 CRTAC1Q9NQ79 661 aa21.56■■□□□ 1.04
CLN6-207ENST00000566347 GKN1Q9NS71 199 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms