RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 AMPD2Q01433 879 aa14.42□□□□□ -0.1
COMMD4-214ENST00000566230 CREB5Q02930 508 aa14.42□□□□□ -0.1
COMMD4-214ENST00000566230 CEBPZQ03701 1054 aaKnown RBP14.42□□□□□ -0.1
COMMD4-214ENST00000566230 SMARCB1Q12824 385 aa14.42□□□□□ -0.1
COMMD4-214ENST00000566230 ZNF268Q14587 947 aaPredicted RBP14.42□□□□□ -0.1
COMMD4-214ENST00000566230 PDGFRLQ15198 375 aa14.42□□□□□ -0.1
COMMD4-214ENST00000566230 SDHAF4Q5VUM1 108 aa14.42□□□□□ -0.1
COMMD4-214ENST00000566230 CC2D1AQ6P1N0 951 aaPredicted RBP14.42□□□□□ -0.1
COMMD4-214ENST00000566230 SYT13Q7L8C5 426 aa14.42□□□□□ -0.1
COMMD4-214ENST00000566230 GPBP1Q86WP2 473 aa14.42□□□□□ -0.1
COMMD4-214ENST00000566230 MYCT1Q8N699 235 aa14.42□□□□□ -0.1
COMMD4-214ENST00000566230 CALML4Q96GE6 196 aa14.42□□□□□ -0.1
COMMD4-214ENST00000566230 CDK5RAP3Q96JB5 506 aa14.42□□□□□ -0.1
COMMD4-214ENST00000566230 USP28Q96RU2 1077 aa14.42□□□□□ -0.1
COMMD4-214ENST00000566230 EDEM2Q9BV94 578 aa14.42□□□□□ -0.1
COMMD4-214ENST00000566230 ASB7Q9H672 318 aa14.42□□□□□ -0.1
COMMD4-214ENST00000566230 ECT2Q9H8V3 914 aa14.42□□□□□ -0.1
COMMD4-214ENST00000566230 KIF9Q9HAQ2 790 aa14.42□□□□□ -0.1
COMMD4-214ENST00000566230 EBF1Q9UH73 591 aa14.42□□□□□ -0.1
COMMD4-214ENST00000566230 CFAP45Q9UL16 551 aa14.42□□□□□ -0.1
COMMD4-214ENST00000566230 WASF3Q9UPY6 502 aa14.42□□□□□ -0.1
COMMD4-214ENST00000566230 C2CD2Q9Y426 696 aa14.42□□□□□ -0.1
COMMD4-214ENST00000566230 PCDHB5Q9Y5E4 795 aa14.42□□□□□ -0.1
COMMD4-214ENST00000566230 FASNP49327 2511 aaKnown RBP14.42□□□□□ -0.1
COMMD4-214ENST00000566230 ANKRD11Q6UB99 2663 aaPredicted RBP14.41□□□□□ -0.1
COMMD4-214ENST00000566230 HELZP42694 1942 aaKnown RBP14.41□□□□□ -0.1
COMMD4-214ENST00000566230 ASPMQ8IZT6 3477 aa14.41□□□□□ -0.1
COMMD4-214ENST00000566230 CACNA1EQ15878 2313 aa14.41□□□□□ -0.1
COMMD4-214ENST00000566230 TRAK2O60296 914 aa14.41□□□□□ -0.1
COMMD4-214ENST00000566230 TADA3O75528 432 aa14.41□□□□□ -0.1
COMMD4-214ENST00000566230 RHOBTB1O94844 696 aa14.41□□□□□ -0.1
COMMD4-214ENST00000566230 FAM13AO94988 1023 aa14.41□□□□□ -0.1
COMMD4-214ENST00000566230 APBB3O95704 486 aa14.41□□□□□ -0.1
COMMD4-214ENST00000566230 SCP2P22307 547 aa14.41□□□□□ -0.1
COMMD4-214ENST00000566230 NOVA1P51513 510 aaKnown RBP14.41□□□□□ -0.1
COMMD4-214ENST00000566230 GTF2BQ00403 316 aa14.41□□□□□ -0.1
COMMD4-214ENST00000566230 DHX8Q14562 1220 aaKnown RBP14.41□□□□□ -0.1
COMMD4-214ENST00000566230 DMC1Q14565 340 aa14.41□□□□□ -0.1
COMMD4-214ENST00000566230 ELF2Q15723 593 aa14.41□□□□□ -0.1
COMMD4-214ENST00000566230 FBXO43Q4G163 708 aa14.41□□□□□ -0.1
COMMD4-214ENST00000566230 CRELD2Q6UXH1 353 aaPredicted RBP14.41□□□□□ -0.1
COMMD4-214ENST00000566230 EFCAB13Q8IY85 973 aa14.41□□□□□ -0.1
COMMD4-214ENST00000566230 DCP1BQ8IZD4 617 aaKnown RBP14.41□□□□□ -0.1
COMMD4-214ENST00000566230 LINC00301Q8NCQ3 95 aa14.41□□□□□ -0.1
COMMD4-214ENST00000566230 MRPS31Q92665 395 aaKnown RBP14.41□□□□□ -0.1
COMMD4-214ENST00000566230 SLC22A12Q96S37 553 aa14.41□□□□□ -0.1
COMMD4-214ENST00000566230 CYP2S1Q96SQ9 504 aa14.41□□□□□ -0.1
COMMD4-214ENST00000566230 PI4K2AQ9BTU6 479 aa14.41□□□□□ -0.1
COMMD4-214ENST00000566230 IKZF4Q9H2S9 585 aa14.41□□□□□ -0.1
COMMD4-214ENST00000566230 BLOC1S4Q9NUP1 217 aa14.41□□□□□ -0.1
COMMD4-214ENST00000566230 TFIP11Q9UBB9 837 aaKnown RBP14.41□□□□□ -0.1
COMMD4-214ENST00000566230 MAGED2Q9UNF1 606 aaPredicted RBP14.41□□□□□ -0.1
COMMD4-214ENST00000566230 INVSQ9Y283 1065 aa14.41□□□□□ -0.1
COMMD4-214ENST00000566230 MYOFQ9NZM1 2061 aa14.4□□□□□ -0.1
COMMD4-214ENST00000566230 LNP1A1A4G5 178 aa14.4□□□□□ -0.1
COMMD4-214ENST00000566230 ANTXRLA6NF34 631 aa14.4□□□□□ -0.1
COMMD4-214ENST00000566230 KPNA7A9QM74 516 aa14.4□□□□□ -0.1
COMMD4-214ENST00000566230 PPP6R2O75170 966 aa14.4□□□□□ -0.1
COMMD4-214ENST00000566230 PRPF40AO75400 957 aaKnown RBP14.4□□□□□ -0.1
COMMD4-214ENST00000566230 YEATS4O95619 227 aa14.4□□□□□ -0.1
COMMD4-214ENST00000566230 TOP3BO95985 862 aaKnown RBP14.4□□□□□ -0.1
COMMD4-214ENST00000566230 CSH1P0DML2 217 aa14.4□□□□□ -0.1
COMMD4-214ENST00000566230 CSH2P0DML3 217 aa14.4□□□□□ -0.1
COMMD4-214ENST00000566230 MTF1Q14872 753 aa14.4□□□□□ -0.1
COMMD4-214ENST00000566230 STK38Q15208 465 aa14.4□□□□□ -0.1
COMMD4-214ENST00000566230 ZNF77Q15935 545 aa14.4□□□□□ -0.1
COMMD4-214ENST00000566230 DDR2Q16832 855 aa14.4□□□□□ -0.1
COMMD4-214ENST00000566230 ZC2HC1CQ53FD0 456 aaPredicted RBP14.4□□□□□ -0.1
COMMD4-214ENST00000566230 UNQ6494/PRO21346Q6UXR6 183 aa14.4□□□□□ -0.1
COMMD4-214ENST00000566230 CPA6Q8N4T0 437 aa14.4□□□□□ -0.1
COMMD4-214ENST00000566230 KRI1Q8N9T8 703 aaKnown RBP14.4□□□□□ -0.1
COMMD4-214ENST00000566230 CD101Q93033 1021 aa14.4□□□□□ -0.1
COMMD4-214ENST00000566230 TMEM121BQ9BXQ6 578 aaPredicted RBP14.4□□□□□ -0.1
COMMD4-214ENST00000566230 PARVGQ9HBI0 331 aa14.4□□□□□ -0.1
COMMD4-214ENST00000566230 DUS2Q9NX74 493 aaKnown RBP14.4□□□□□ -0.1
COMMD4-214ENST00000566230 CCDC39Q9UFE4 941 aa14.4□□□□□ -0.1
COMMD4-214ENST00000566230 FBXO2Q9UK22 296 aaPredicted RBP14.4□□□□□ -0.1
COMMD4-214ENST00000566230 ZMIZ1Q9ULJ6 1067 aa14.4□□□□□ -0.1
COMMD4-214ENST00000566230 ATP6V1DQ9Y5K8 247 aa14.4□□□□□ -0.1
COMMD4-214ENST00000566230 WNT6Q9Y6F9 365 aa14.4□□□□□ -0.1
COMMD4-214ENST00000566230 STYXL1Q9Y6J8 313 aa14.4□□□□□ -0.1
COMMD4-214ENST00000566230 MYO18AQ92614 2054 aaKnown RBP14.4□□□□□ -0.1
COMMD4-214ENST00000566230 SPTLC2O15270 562 aa14.39□□□□□ -0.11
COMMD4-214ENST00000566230 NOL4O94818 638 aa14.39□□□□□ -0.11
COMMD4-214ENST00000566230 SPINK2P20155 84 aa14.39□□□□□ -0.11
COMMD4-214ENST00000566230 CYP2F1P24903 491 aa14.39□□□□□ -0.11
COMMD4-214ENST00000566230 DDIT3P35638 169 aa14.39□□□□□ -0.11
COMMD4-214ENST00000566230 DGKEP52429 567 aa14.39□□□□□ -0.11
COMMD4-214ENST00000566230 WNT7BP56706 349 aa14.39□□□□□ -0.11
COMMD4-214ENST00000566230 MCM6Q14566 821 aa14.39□□□□□ -0.11
COMMD4-214ENST00000566230 KARSQ15046 597 aaKnown RBP14.39□□□□□ -0.11
COMMD4-214ENST00000566230 EML3Q32P44 896 aa14.39□□□□□ -0.11
COMMD4-214ENST00000566230 PMS2CLQ68D20 193 aa14.39□□□□□ -0.11
COMMD4-214ENST00000566230 SCARA3Q6AZY7 606 aa14.39□□□□□ -0.11
COMMD4-214ENST00000566230 ADALQ6DHV7 355 aa14.39□□□□□ -0.11
COMMD4-214ENST00000566230 KDF1Q8NAX2 398 aaPredicted RBP14.39□□□□□ -0.11
COMMD4-214ENST00000566230 OSCP1Q8WVF1 389 aa14.39□□□□□ -0.11
COMMD4-214ENST00000566230 MYRFLQ96LU7 910 aa14.39□□□□□ -0.11
COMMD4-214ENST00000566230 PKMYT1Q99640 499 aa14.39□□□□□ -0.11
COMMD4-214ENST00000566230 LINC00597Q9H2U6 94 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms