RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 PURAQ00577 322 aaKnown RBP4.96□□□□□ -1.61
LINC00561-201ENST00000565815 ZNF568Q3ZCX4 644 aa4.96□□□□□ -1.61
LINC00561-201ENST00000565815 LRTOMTQ8WZ04 291 aa4.96□□□□□ -1.61
LINC00561-201ENST00000565815 RELTQ969Z4 430 aa4.96□□□□□ -1.61
LINC00561-201ENST00000565815 CDK5RAP3Q96JB5 506 aa4.96□□□□□ -1.61
LINC00561-201ENST00000565815 WWC2-AS2Q96NR7 200 aa4.96□□□□□ -1.61
LINC00561-201ENST00000565815 PANK3Q9H999 370 aa4.96□□□□□ -1.61
LINC00561-201ENST00000565815 ADARB2Q9NS39 739 aaKnown RBP4.96□□□□□ -1.61
LINC00561-201ENST00000565815 PNPOQ9NVS9 261 aa4.96□□□□□ -1.61
LINC00561-201ENST00000565815 CDC23Q9UJX2 597 aa4.96□□□□□ -1.61
LINC00561-201ENST00000565815 ZNF536O15090 1300 aa4.96□□□□□ -1.62
LINC00561-201ENST00000565815 RIC1Q4ADV7 1423 aa4.96□□□□□ -1.62
LINC00561-201ENST00000565815 A0A0G2JLL6 359 aaPredicted RBP4.96□□□□□ -1.62
LINC00561-201ENST00000565815 SGTAO43765 313 aa4.96□□□□□ -1.62
LINC00561-201ENST00000565815 SRGNP10124 158 aa4.96□□□□□ -1.62
LINC00561-201ENST00000565815 CAPN2P17655 700 aa4.96□□□□□ -1.62
LINC00561-201ENST00000565815 CHRM3P20309 590 aa4.96□□□□□ -1.62
LINC00561-201ENST00000565815 IL6STP40189 918 aaPredicted RBP4.96□□□□□ -1.62
LINC00561-201ENST00000565815 TRAPPC10P48553 1259 aa4.96□□□□□ -1.62
LINC00561-201ENST00000565815 WNT3AP56704 352 aa4.96□□□□□ -1.62
LINC00561-201ENST00000565815 BIRC2Q13490 618 aa4.96□□□□□ -1.62
LINC00561-201ENST00000565815 BECN1Q14457 450 aa4.96□□□□□ -1.62
LINC00561-201ENST00000565815 ELAVL1Q15717 326 aaKnown RBP4.96□□□□□ -1.62
LINC00561-201ENST00000565815 ARHGEF18Q6ZSZ5 1173 aa4.96□□□□□ -1.62
LINC00561-201ENST00000565815 CNBD1Q8NA66 436 aa4.96□□□□□ -1.62
LINC00561-201ENST00000565815 RABGGTAQ92696 567 aa4.96□□□□□ -1.62
LINC00561-201ENST00000565815 NDC1Q9BTX1 674 aa4.96□□□□□ -1.62
LINC00561-201ENST00000565815 TMX4Q9H1E5 349 aaPredicted RBP4.96□□□□□ -1.62
LINC00561-201ENST00000565815 GSTO2Q9H4Y5 243 aa4.96□□□□□ -1.62
LINC00561-201ENST00000565815 GEMIN8Q9NWZ8 242 aaKnown RBP4.96□□□□□ -1.62
LINC00561-201ENST00000565815 BCORQ6W2J9 1755 aa4.96□□□□□ -1.62
LINC00561-201ENST00000565815 ZNF185O15231 689 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 PPP2R1AP30153 589 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 ALDH5A1P51649 535 aaPredicted RBP4.95□□□□□ -1.62
LINC00561-201ENST00000565815 EIF5P55010 431 aaKnown RBP4.95□□□□□ -1.62
LINC00561-201ENST00000565815 PPP2CBP62714 309 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 PPP2CAP67775 309 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 SLFN5Q08AF3 891 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 SMIM5Q71RC9 77 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 MORC1Q86VD1 984 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 ARPC5LQ9BPX5 153 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 ZSWIM1Q9BR11 485 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 MANSC1Q9H8J5 431 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 PLA2G3Q9NZ20 509 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 SCN7AQ01118 1682 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 SCN11AQ9UI33 1791 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 NPHP1O15259 732 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 MTSS1O43312 755 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 LAMTOR5O43504 91 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 VPS4BO75351 444 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 LDHAP00338 332 aaKnown RBP4.95□□□□□ -1.62
LINC00561-201ENST00000565815 BRAFP15056 766 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 SLC7A1P30825 629 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 CTXN1P60606 82 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 NOMO2Q5JPE7 1267 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 PRR5LQ6MZQ0 368 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 Q6ZRM9 215 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 TCF25Q9BQ70 676 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 KMT5AQ9NQR1 393 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 IBTKQ9P2D0 1353 aaPredicted RBP4.95□□□□□ -1.62
LINC00561-201ENST00000565815 ZNF785A8K8V0 405 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 IFIT2P09913 472 aaKnown RBP4.95□□□□□ -1.62
LINC00561-201ENST00000565815 U2AF1L5P0DN76 240 aaPredicted RBP4.95□□□□□ -1.62
LINC00561-201ENST00000565815 ATP5JP18859 108 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 CHN2P52757 468 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 SUMO3P55854 103 aaPredicted RBP4.95□□□□□ -1.62
LINC00561-201ENST00000565815 U2AF1Q01081 240 aaKnown RBP eCLIP4.95□□□□□ -1.62
LINC00561-201ENST00000565815 MRPL49Q13405 166 aaKnown RBP4.95□□□□□ -1.62
LINC00561-201ENST00000565815 PICALMQ13492 652 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 GAGE13Q4V321 117 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 UTP14CQ5TAP6 766 aaKnown RBP4.95□□□□□ -1.62
LINC00561-201ENST00000565815 FAM111BQ6SJ93 734 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 SYNE4Q8N205 404 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 ANKS1AQ92625 1134 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 LRIG1Q96JA1 1093 aa4.95□□□□□ -1.62
LINC00561-201ENST00000565815 SSBP3Q9BWW4 388 aaPredicted RBP4.95□□□□□ -1.62
LINC00561-201ENST00000565815 FEZ2Q9UHY8 353 aaPredicted RBP4.95□□□□□ -1.62
LINC00561-201ENST00000565815 ANKRD31Q8N7Z5 1873 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 A0A1W2PPL8 197 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 FKBP1BP68106 108 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 CAP1Q01518 475 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 TNIP1Q15025 636 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 FAM47AQ5JRC9 791 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 L1TD1Q5T7N2 865 aaKnown RBP4.94□□□□□ -1.62
LINC00561-201ENST00000565815 MED25Q71SY5 747 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 DNAJC10Q8IXB1 793 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 ZNF808Q8N4W9 903 aaPredicted RBP4.94□□□□□ -1.62
LINC00561-201ENST00000565815 GIMAP8Q8ND71 665 aaPredicted RBP4.94□□□□□ -1.62
LINC00561-201ENST00000565815 C18orf8Q96DM3 657 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 CPPED1Q9BRF8 314 aaPredicted RBP4.94□□□□□ -1.62
LINC00561-201ENST00000565815 NYXQ9GZU5 481 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 SRRDQ9UH36 339 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.94□□□□□ -1.62
LINC00561-201ENST00000565815 MYO1FO00160 1098 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 AGFG2O95081 481 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 ZFPL1O95159 310 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 KIF20AO95235 890 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 MYF5P13349 255 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 PIK3CGP48736 1102 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 SESN2P58004 480 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms