RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 MMRN2Q9H8L6 949 aa16.46■□□□□ 0.23
COMMD4-212ENST00000565517 CYP3A43Q9HB55 503 aa16.46■□□□□ 0.23
COMMD4-212ENST00000565517 ZNF334Q9HCZ1 680 aaPredicted RBP16.46■□□□□ 0.23
COMMD4-212ENST00000565517 CTNND2Q9UQB3 1225 aa16.46■□□□□ 0.23
COMMD4-212ENST00000565517 COQ4Q9Y3A0 265 aa16.46■□□□□ 0.23
COMMD4-212ENST00000565517 NUP210Q8TEM1 1887 aaPredicted RBP16.46■□□□□ 0.22
COMMD4-212ENST00000565517 MYH10P35580 1976 aa16.46■□□□□ 0.22
COMMD4-212ENST00000565517 ZNF638Q14966 1978 aaKnown RBP16.46■□□□□ 0.22
COMMD4-212ENST00000565517 ECI2O75521 394 aa16.45■□□□□ 0.22
COMMD4-212ENST00000565517 CLSTN1O94985 981 aa16.45■□□□□ 0.22
COMMD4-212ENST00000565517 FGFR1OPO95684 399 aaKnown RBP16.45■□□□□ 0.22
COMMD4-212ENST00000565517 GNA14O95837 355 aa16.45■□□□□ 0.22
COMMD4-212ENST00000565517 SRFP11831 508 aa16.45■□□□□ 0.22
COMMD4-212ENST00000565517 HMGA1P17096 107 aaKnown RBP16.45■□□□□ 0.22
COMMD4-212ENST00000565517 CDC25CP30307 473 aa16.45■□□□□ 0.22
COMMD4-212ENST00000565517 ASPAP45381 313 aa16.45■□□□□ 0.22
COMMD4-212ENST00000565517 CCDC142Q17RM4 750 aa16.45■□□□□ 0.22
COMMD4-212ENST00000565517 MDH1BQ5I0G3 518 aa16.45■□□□□ 0.22
COMMD4-212ENST00000565517 TCERG1LQ5VWI1 586 aa16.45■□□□□ 0.22
COMMD4-212ENST00000565517 SPOPLQ6IQ16 392 aa16.45■□□□□ 0.22
COMMD4-212ENST00000565517 GAREM2Q75VX8 874 aa16.45■□□□□ 0.22
COMMD4-212ENST00000565517 CRYBG2Q8N1P7 616 aa16.45■□□□□ 0.22
COMMD4-212ENST00000565517 MLKLQ8NB16 471 aa16.45■□□□□ 0.22
COMMD4-212ENST00000565517 GIPC2Q8TF65 315 aa16.45■□□□□ 0.22
COMMD4-212ENST00000565517 SPATA17Q96L03 361 aa16.45■□□□□ 0.22
COMMD4-212ENST00000565517 MYRFLQ96LU7 910 aa16.45■□□□□ 0.22
COMMD4-212ENST00000565517 ASB16Q96NS5 453 aa16.45■□□□□ 0.22
COMMD4-212ENST00000565517 NUP62CLQ9H1M0 184 aa16.45■□□□□ 0.22
COMMD4-212ENST00000565517 SMOC2Q9H3U7 446 aa16.45■□□□□ 0.22
COMMD4-212ENST00000565517 FAM124BQ9H5Z6 455 aaPredicted RBP16.45■□□□□ 0.22
COMMD4-212ENST00000565517 TRPV4Q9HBA0 871 aa16.45■□□□□ 0.22
COMMD4-212ENST00000565517 APOBEC3GQ9HC16 384 aaKnown RBP16.45■□□□□ 0.22
COMMD4-212ENST00000565517 RAB20Q9NX57 234 aa16.45■□□□□ 0.22
COMMD4-212ENST00000565517 RWDD2AQ9UIY3 292 aa16.45■□□□□ 0.22
COMMD4-212ENST00000565517 ZMYM5Q9UJ78 669 aa16.45■□□□□ 0.22
COMMD4-212ENST00000565517 A0A1W2PRU2 124 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 NRG2O14511 850 aaPredicted RBP16.44■□□□□ 0.22
COMMD4-212ENST00000565517 PMM2O15305 246 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 NOL4O94818 638 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 GJA1P17302 382 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 BDNFP23560 247 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 GABRR2P28476 465 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 MARSP56192 900 aaKnown RBP16.44■□□□□ 0.22
COMMD4-212ENST00000565517 STX17P56962 302 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 CYP27A1Q02318 531 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 INCA1Q0VD86 236 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 TEAD2Q15562 447 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 DDR2Q16832 855 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 CCDC40Q4G0X9 1142 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 DCAF17Q5H9S7 520 aaPredicted RBP16.44■□□□□ 0.22
COMMD4-212ENST00000565517 SCARA5Q6ZMJ2 495 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 SEMA4DQ92854 862 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 SMARCD2Q92925 531 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 ELSPBP1Q96BH3 223 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 ELMO3Q96BJ8 720 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 TRMT2BQ96GJ1 504 aaKnown RBP16.44■□□□□ 0.22
COMMD4-212ENST00000565517 ZSWIM3Q96MP5 696 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 RPP25Q9BUL9 199 aaKnown RBP16.44■□□□□ 0.22
COMMD4-212ENST00000565517 ELOVL4Q9GZR5 314 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 NIF3L1Q9GZT8 377 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 ATXN3LQ9H3M9 355 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 DPEP3Q9H4B8 488 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 IL21Q9HBE4 155 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 SLC2A4RGQ9NR83 387 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 UXTQ9UBK9 157 aaPredicted RBP16.44■□□□□ 0.22
COMMD4-212ENST00000565517 WNT16Q9UBV4 365 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 ANAPC1Q9H1A4 1944 aa16.44■□□□□ 0.22
COMMD4-212ENST00000565517 SOBPA7XYQ1 873 aa16.43■□□□□ 0.22
COMMD4-212ENST00000565517 TRIM66O15016 1216 aa16.43■□□□□ 0.22
COMMD4-212ENST00000565517 WEE1P30291 646 aa16.43■□□□□ 0.22
COMMD4-212ENST00000565517 GRIK1P39086 918 aa16.43■□□□□ 0.22
COMMD4-212ENST00000565517 RAP1GAPP47736 663 aa16.43■□□□□ 0.22
COMMD4-212ENST00000565517 GPR15P49685 360 aa16.43■□□□□ 0.22
COMMD4-212ENST00000565517 NDST1P52848 882 aa16.43■□□□□ 0.22
COMMD4-212ENST00000565517 CBWD6Q4V339 395 aa16.43■□□□□ 0.22
COMMD4-212ENST00000565517 ARHGAP15Q53QZ3 475 aa16.43■□□□□ 0.22
COMMD4-212ENST00000565517 WDR44Q5JSH3 913 aa16.43■□□□□ 0.22
COMMD4-212ENST00000565517 CBWD3Q5JTY5 395 aa16.43■□□□□ 0.22
COMMD4-212ENST00000565517 FAM78AQ5JUQ0 283 aa16.43■□□□□ 0.22
COMMD4-212ENST00000565517 CBWD5Q5RIA9 395 aa16.43■□□□□ 0.22
COMMD4-212ENST00000565517 HFE2Q6ZVN8 426 aa16.43■□□□□ 0.22
COMMD4-212ENST00000565517 SCN4BQ8IWT1 228 aa16.43■□□□□ 0.22
COMMD4-212ENST00000565517 TTC39CQ8N584 583 aa16.43■□□□□ 0.22
COMMD4-212ENST00000565517 GPR152Q8TDT2 470 aa16.43■□□□□ 0.22
COMMD4-212ENST00000565517 PBXIP1Q96AQ6 731 aa16.43■□□□□ 0.22
COMMD4-212ENST00000565517 E2F7Q96AV8 911 aa16.43■□□□□ 0.22
COMMD4-212ENST00000565517 C8orf48Q96LL4 319 aa16.43■□□□□ 0.22
COMMD4-212ENST00000565517 GCNAQ96QF7 691 aa16.43■□□□□ 0.22
COMMD4-212ENST00000565517 SRRTQ9BXP5 876 aaKnown RBP16.43■□□□□ 0.22
COMMD4-212ENST00000565517 B3GNT5Q9BYG0 378 aa16.43■□□□□ 0.22
COMMD4-212ENST00000565517 ZFP14Q9HCL3 533 aa16.43■□□□□ 0.22
COMMD4-212ENST00000565517 SLC38A8A6NNN8 435 aa16.42■□□□□ 0.22
COMMD4-212ENST00000565517 NARSO43776 548 aaKnown RBP16.42■□□□□ 0.22
COMMD4-212ENST00000565517 LRRN2O75325 713 aa16.42■□□□□ 0.22
COMMD4-212ENST00000565517 F11P03951 625 aa16.42■□□□□ 0.22
COMMD4-212ENST00000565517 TRIM21P19474 475 aaKnown RBP16.42■□□□□ 0.22
COMMD4-212ENST00000565517 FCARP24071 287 aa16.42■□□□□ 0.22
COMMD4-212ENST00000565517 FMO5P49326 533 aa16.42■□□□□ 0.22
COMMD4-212ENST00000565517 NLRP12P59046 1061 aa16.42■□□□□ 0.22
COMMD4-212ENST00000565517 SDHAF4Q5VUM1 108 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms