RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 RESP18Q5W5W9 173 aa25.47■■□□□ 1.67
RAB40C-209ENST00000565511 STXBP4Q6ZWJ1 553 aa25.47■■□□□ 1.67
RAB40C-209ENST00000565511 UNC13DQ70J99 1090 aa25.47■■□□□ 1.67
RAB40C-209ENST00000565511 HSCBQ8IWL3 235 aa25.47■■□□□ 1.67
RAB40C-209ENST00000565511 RDH13Q8NBN7 331 aa25.47■■□□□ 1.67
RAB40C-209ENST00000565511 RUBCNQ92622 972 aa25.47■■□□□ 1.67
RAB40C-209ENST00000565511 HINFPQ9BQA5 517 aa25.47■■□□□ 1.67
RAB40C-209ENST00000565511 LRRC27Q9C0I9 530 aa25.47■■□□□ 1.67
RAB40C-209ENST00000565511 EPC1Q9H2F5 836 aa25.47■■□□□ 1.67
RAB40C-209ENST00000565511 C8orf33Q9H7E9 229 aaPredicted RBP25.47■■□□□ 1.67
RAB40C-209ENST00000565511 ABCB6Q9NP58 842 aa25.47■■□□□ 1.67
RAB40C-209ENST00000565511 CRTAC1Q9NQ79 661 aa25.47■■□□□ 1.67
RAB40C-209ENST00000565511 SMG5Q9UPR3 1016 aaKnown RBP25.47■■□□□ 1.67
RAB40C-209ENST00000565511 ATG2BQ96BY7 2078 aa25.47■■□□□ 1.67
RAB40C-209ENST00000565511 HELZP42694 1942 aaKnown RBP25.46■■□□□ 1.67
RAB40C-209ENST00000565511 ID4P47928 161 aa25.46■■□□□ 1.67
RAB40C-209ENST00000565511 DNM1Q05193 864 aaKnown RBP25.46■■□□□ 1.67
RAB40C-209ENST00000565511 SNRNP35Q16560 246 aaKnown RBP25.46■■□□□ 1.67
RAB40C-209ENST00000565511 TRIM68Q6AZZ1 485 aa25.46■■□□□ 1.67
RAB40C-209ENST00000565511 FAM171BQ6P995 826 aa25.46■■□□□ 1.67
RAB40C-209ENST00000565511 MAMSTRQ6ZN01 415 aa25.46■■□□□ 1.67
RAB40C-209ENST00000565511 WDR49Q8IV35 697 aa25.46■■□□□ 1.67
RAB40C-209ENST00000565511 ATRIPQ8WXE1 791 aa25.46■■□□□ 1.67
RAB40C-209ENST00000565511 RMDN1Q96DB5 314 aa25.46■■□□□ 1.67
RAB40C-209ENST00000565511 SLC22A12Q96S37 553 aa25.46■■□□□ 1.67
RAB40C-209ENST00000565511 TNNC2P02585 160 aa25.45■■□□□ 1.66
RAB40C-209ENST00000565511 CSH1P0DML2 217 aa25.45■■□□□ 1.66
RAB40C-209ENST00000565511 CSH2P0DML3 217 aa25.45■■□□□ 1.66
RAB40C-209ENST00000565511 AFMP43652 599 aa25.45■■□□□ 1.66
RAB40C-209ENST00000565511 CYP24A1Q07973 514 aa25.45■■□□□ 1.66
RAB40C-209ENST00000565511 DUOXA2Q1HG44 320 aa25.45■■□□□ 1.66
RAB40C-209ENST00000565511 TRAPPC11Q7Z392 1133 aa25.45■■□□□ 1.66
RAB40C-209ENST00000565511 CELF5Q8N6W0 485 aaKnown RBP25.45■■□□□ 1.66
RAB40C-209ENST00000565511 SPATA18Q8TC71 538 aa25.45■■□□□ 1.66
RAB40C-209ENST00000565511 PLEKHO2Q8TD55 490 aa25.45■■□□□ 1.66
RAB40C-209ENST00000565511 MYLPFQ96A32 169 aa25.45■■□□□ 1.66
RAB40C-209ENST00000565511 MSANTD3Q96H12 275 aa25.45■■□□□ 1.66
RAB40C-209ENST00000565511 FAM83CQ9BQN1 747 aa25.45■■□□□ 1.66
RAB40C-209ENST00000565511 SYT15Q9BQS2 421 aa25.45■■□□□ 1.66
RAB40C-209ENST00000565511 SLC39A2Q9NP94 309 aa25.45■■□□□ 1.66
RAB40C-209ENST00000565511 GKN1Q9NS71 199 aa25.45■■□□□ 1.66
RAB40C-209ENST00000565511 UBE4BO95155 1302 aa25.44■■□□□ 1.66
RAB40C-209ENST00000565511 CST3P01034 146 aaPredicted RBP25.44■■□□□ 1.66
RAB40C-209ENST00000565511 DLATP10515 647 aaKnown RBP25.44■■□□□ 1.66
RAB40C-209ENST00000565511 ARSAP15289 507 aa25.44■■□□□ 1.66
RAB40C-209ENST00000565511 ME1P48163 572 aa25.44■■□□□ 1.66
RAB40C-209ENST00000565511 LHX1P48742 406 aa25.44■■□□□ 1.66
RAB40C-209ENST00000565511 AMPD3Q01432 767 aa25.44■■□□□ 1.66
RAB40C-209ENST00000565511 CFAP221Q4G0U5 840 aa25.44■■□□□ 1.66
RAB40C-209ENST00000565511 NAIF1Q69YI7 327 aaPredicted RBP25.44■■□□□ 1.66
RAB40C-209ENST00000565511 MON1AQ86VX9 555 aa25.44■■□□□ 1.66
RAB40C-209ENST00000565511 RALGPS2Q86X27 583 aaPredicted RBP25.44■■□□□ 1.66
RAB40C-209ENST00000565511 ZNF516Q92618 1163 aa25.44■■□□□ 1.66
RAB40C-209ENST00000565511 CGRRF1Q99675 332 aa25.44■■□□□ 1.66
RAB40C-209ENST00000565511 MRPL45Q9BRJ2 306 aaKnown RBP25.44■■□□□ 1.66
RAB40C-209ENST00000565511 IER2Q9BTL4 223 aa25.44■■□□□ 1.66
RAB40C-209ENST00000565511 KLRC4O43908 158 aa25.43■■□□□ 1.66
RAB40C-209ENST00000565511 WARSP23381 471 aaKnown RBP25.43■■□□□ 1.66
RAB40C-209ENST00000565511 PCSK1P29120 753 aa25.43■■□□□ 1.66
RAB40C-209ENST00000565511 CCR3P51677 355 aa25.43■■□□□ 1.66
RAB40C-209ENST00000565511 MYO1EQ12965 1108 aa25.43■■□□□ 1.66
RAB40C-209ENST00000565511 CCINQ13939 588 aa25.43■■□□□ 1.66
RAB40C-209ENST00000565511 PSMD6Q15008 389 aa25.43■■□□□ 1.66
RAB40C-209ENST00000565511 BMT2Q1RMZ1 405 aa25.43■■□□□ 1.66
RAB40C-209ENST00000565511 PKN3Q6P5Z2 889 aa25.43■■□□□ 1.66
RAB40C-209ENST00000565511 SPATA2LQ8IUW3 424 aaPredicted RBP25.43■■□□□ 1.66
RAB40C-209ENST00000565511 SCN4BQ8IWT1 228 aa25.43■■□□□ 1.66
RAB40C-209ENST00000565511 CCDC127Q96BQ5 260 aa25.43■■□□□ 1.66
RAB40C-209ENST00000565511 TRMT2BQ96GJ1 504 aaKnown RBP25.43■■□□□ 1.66
RAB40C-209ENST00000565511 MAGEF1Q9HAY2 307 aa25.43■■□□□ 1.66
RAB40C-209ENST00000565511 SERTAD1Q9UHV2 236 aa25.43■■□□□ 1.66
RAB40C-209ENST00000565511 K7ESF4 209 aa25.42■■□□□ 1.66
RAB40C-209ENST00000565511 ACTN4O43707 911 aaKnown RBP25.42■■□□□ 1.66
RAB40C-209ENST00000565511 PDGFRBP09619 1106 aa25.42■■□□□ 1.66
RAB40C-209ENST00000565511 AVPR1AP37288 418 aa25.42■■□□□ 1.66
RAB40C-209ENST00000565511 CASP4P49662 377 aa25.42■■□□□ 1.66
RAB40C-209ENST00000565511 RPL10AP62906 217 aaKnown RBP25.42■■□□□ 1.66
RAB40C-209ENST00000565511 PLCB2Q00722 1185 aa25.42■■□□□ 1.66
RAB40C-209ENST00000565511 SURF1Q15526 300 aa25.42■■□□□ 1.66
RAB40C-209ENST00000565511 ITPRIPL2Q3MIP1 535 aa25.42■■□□□ 1.66
RAB40C-209ENST00000565511 SPEM1Q8N4L4 309 aa25.42■■□□□ 1.66
RAB40C-209ENST00000565511 MRPS31Q92665 395 aaKnown RBP25.42■■□□□ 1.66
RAB40C-209ENST00000565511 MYRFLQ96LU7 910 aa25.42■■□□□ 1.66
RAB40C-209ENST00000565511 CYP2S1Q96SQ9 504 aa25.42■■□□□ 1.66
RAB40C-209ENST00000565511 EBF3Q9H4W6 596 aa25.42■■□□□ 1.66
RAB40C-209ENST00000565511 KIAA1586Q9HCI6 787 aa25.42■■□□□ 1.66
RAB40C-209ENST00000565511 TDP1Q9NUW8 608 aa25.42■■□□□ 1.66
RAB40C-209ENST00000565511 TMEM30AQ9NV96 361 aa25.42■■□□□ 1.66
RAB40C-209ENST00000565511 MYO16Q9Y6X6 1858 aa25.42■■□□□ 1.66
RAB40C-209ENST00000565511 DDX6P26196 483 aaKnown RBP eCLIP25.41■■□□□ 1.66
RAB40C-209ENST00000565511 CXCL12P48061 93 aa25.41■■□□□ 1.66
RAB40C-209ENST00000565511 USP46P62068 366 aa25.41■■□□□ 1.66
RAB40C-209ENST00000565511 SRSF5Q13243 272 aaKnown RBP25.41■■□□□ 1.66
RAB40C-209ENST00000565511 LRRC32Q14392 662 aa25.41■■□□□ 1.66
RAB40C-209ENST00000565511 LPAL2Q16609 132 aa25.41■■□□□ 1.66
RAB40C-209ENST00000565511 DPH6Q7L8W6 267 aa25.41■■□□□ 1.66
RAB40C-209ENST00000565511 XXYLT1Q8NBI6 393 aa25.41■■□□□ 1.66
RAB40C-209ENST00000565511 ELMO3Q96BJ8 720 aa25.41■■□□□ 1.66
RAB40C-209ENST00000565511 FUBP3Q96I24 572 aaKnown RBP eCLIP25.41■■□□□ 1.66
RAB40C-209ENST00000565511 TRPC7Q9HCX4 862 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms