RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 SPASTQ9UBP0 616 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 ING4Q9UNL4 249 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 MYH15Q9Y2K3 1946 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 ALDH1A1P00352 501 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 COBLL1Q53SF7 1204 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 KCNV1Q6PIU1 500 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 AMER2Q8N7J2 671 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 USP38Q8NB14 1042 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 MAPRE3Q9UPY8 281 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 CDK12Q9NYV4 1490 aaPredicted RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 PTCH1Q13635 1447 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 EMSYQ7Z589 1322 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 GSAPA4D1B5 854 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 ATP6V1G2O95670 118 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 HSMCR30P0CW71 290 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 ALDH6A1Q02252 535 aaKnown RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 DGKKQ5KSL6 1271 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 TWF2Q6IBS0 349 aaKnown RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 NAPEPLDQ6IQ20 393 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 CHCHD6Q9BRQ6 235 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 UGT2B28Q9BY64 529 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 TIMMDC1Q9NPL8 285 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 APEX2Q9UBZ4 518 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 CCDC162PA2VCL2 907 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 ZBTB5O15062 677 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 PDE8BO95263 885 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 CYP21A2P08686 494 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 SLC2A3P11169 496 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 MTA1Q13330 715 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 ITGA9Q13797 1035 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 NAB2Q15742 525 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 SLC27A3Q5K4L6 730 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 ANKRD40Q6AI12 368 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 RNASE11Q8TAA1 199 aaKnown RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 TRMT6Q9UJA5 497 aaKnown RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 WDR62O43379 1518 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 FAM47E-STBD1D6RA91 191 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 ALDH1A2O94788 518 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 NPR3P17342 541 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 TGM2P21980 687 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 ACADLP28330 430 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 CASP4P49662 377 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 NEK5Q6P3R8 708 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 LRRC74BQ6ZQY2 392 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 ANKMY2Q8IV38 441 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 RDM1Q8NG50 284 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 TFB1MQ8WVM0 346 aaKnown RBP5.27□□□□□ -1.57
SMG1-211ENST00000565324 C8orf37Q96NL8 207 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 ISCUQ9H1K1 167 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 ALDH8A1Q9H2A2 487 aaPredicted RBP5.27□□□□□ -1.57
SMG1-211ENST00000565324 DBR1Q9UK59 544 aaKnown RBP5.27□□□□□ -1.57
SMG1-211ENST00000565324 UTYO14607 1347 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 EFCAB10A6NFE3 127 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 POTECB2RU33 542 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 TCF4P15884 667 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 RIPPLY1Q0D2K3 151 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 CHI3L2Q15782 390 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 CCDC153Q494R4 210 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 ZDHHC13Q8IUH4 622 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 MMGT1Q8N4V1 131 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 FAM81AQ8TBF8 368 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 PPP1R36Q96LQ0 422 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 WBP11Q9Y2W2 641 aaKnown RBP5.27□□□□□ -1.57
SMG1-211ENST00000565324 C15orf38-AP3S2A0A0A6YYH1 394 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 IDH3BO43837 385 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 TNFRSF21O75509 655 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 TCN1P20061 433 aaPredicted RBP5.27□□□□□ -1.57
SMG1-211ENST00000565324 STARP49675 285 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 ARHGDIBP52566 201 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 MTMR1Q13613 665 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 CCNI2Q6ZMN8 369 aaPredicted RBP5.27□□□□□ -1.57
SMG1-211ENST00000565324 ARPINQ7Z6K5 226 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 UNC45BQ8IWX7 931 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 OR6Y1Q8NGX8 325 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 PPP1R14BQ96C90 147 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 NEK6Q9HC98 313 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 TMEM51Q9NW97 253 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 RBAKQ9NYW8 714 aaPredicted RBP5.27□□□□□ -1.57
SMG1-211ENST00000565324 CRNNQ9UBG3 495 aaPredicted RBP5.27□□□□□ -1.57
SMG1-211ENST00000565324 PCSK1NQ9UHG2 260 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 SYNDIG1LA6NDD5 238 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 BNIP3LO60238 219 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 LDLRP01130 860 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 CYP2D6P10635 497 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 GHRP10912 638 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 STIP1P31948 543 aaKnown RBP5.27□□□□□ -1.57
SMG1-211ENST00000565324 GRIK1P39086 918 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 USP11P51784 963 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 PDK1Q15118 436 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 EFHC1Q5JVL4 640 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 SCN4BQ8IWT1 228 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 CCDC185Q8N715 623 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 ZNF513Q8N8E2 541 aaPredicted RBP5.27□□□□□ -1.57
SMG1-211ENST00000565324 DDX17Q92841 729 aaKnown RBP5.27□□□□□ -1.57
SMG1-211ENST00000565324 CNKSR1Q969H4 720 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 CHID1Q9BWS9 393 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 TRPM5Q9NZQ8 1165 aa5.27□□□□□ -1.57
SMG1-211ENST00000565324 MARCOQ9UEW3 520 aaPredicted RBP5.27□□□□□ -1.57
SMG1-211ENST00000565324 LSM7Q9UK45 103 aaKnown RBP5.27□□□□□ -1.57
SMG1-211ENST00000565324 AATKQ6ZMQ8 1374 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms