RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 MYCBPAPQ8TBZ2 947 aa19.59■□□□□ 0.73
SYNGR3-204ENST00000564642 MYLPFQ96A32 169 aa19.59■□□□□ 0.73
SYNGR3-204ENST00000564642 E2F7Q96AV8 911 aa19.59■□□□□ 0.73
SYNGR3-204ENST00000564642 EEF2KMTQ96G04 330 aa19.59■□□□□ 0.73
SYNGR3-204ENST00000564642 SHDQ96IW2 340 aa19.59■□□□□ 0.73
SYNGR3-204ENST00000564642 MKNK1Q9BUB5 465 aa19.59■□□□□ 0.73
SYNGR3-204ENST00000564642 TRMT61BQ9BVS5 477 aaKnown RBP19.59■□□□□ 0.73
SYNGR3-204ENST00000564642 MMRN2Q9H8L6 949 aa19.59■□□□□ 0.73
SYNGR3-204ENST00000564642 ARHGEF3Q9NR81 526 aa19.59■□□□□ 0.73
SYNGR3-204ENST00000564642 HLA-DRAP01903 254 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 TRIM49P0CI25 452 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 TRIM49CP0CI26 452 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 PSMC3P17980 439 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 PTPN1P18031 435 aaKnown RBP19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 BDNFP23560 247 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 GRIK1P39086 918 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 PPP1R2P41236 205 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 VIPR2P41587 438 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 GCLMP48507 274 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 CDH8P55286 799 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 UBE2HP62256 183 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 GRM2Q14416 872 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 SLC44A4Q53GD3 710 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 MDH1BQ5I0G3 518 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 STXBP5Q5T5C0 1151 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 ANKRD40Q6AI12 368 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 SCARA5Q6ZMJ2 495 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 ADSSL1Q8N142 457 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 ELMO3Q96BJ8 720 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 PCED1BQ96HM7 432 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 IMPG2Q9BZV3 1241 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 TASP1Q9H6P5 420 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 SMYD3Q9H7B4 428 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 TRPV4Q9HBA0 871 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 IL21Q9HBE4 155 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 UXTQ9UBK9 157 aaPredicted RBP19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 MAN1B1Q9UKM7 699 aa19.58■□□□□ 0.72
SYNGR3-204ENST00000564642 DENND4CQ5VZ89 1909 aa19.57■□□□□ 0.72
SYNGR3-204ENST00000564642 SLC38A8A6NNN8 435 aa19.57■□□□□ 0.72
SYNGR3-204ENST00000564642 DPYSL4O14531 572 aa19.57■□□□□ 0.72
SYNGR3-204ENST00000564642 PSMA7O14818 248 aa19.57■□□□□ 0.72
SYNGR3-204ENST00000564642 HMGA1P17096 107 aaKnown RBP19.57■□□□□ 0.72
SYNGR3-204ENST00000564642 ANXA13P27216 316 aa19.57■□□□□ 0.72
SYNGR3-204ENST00000564642 NUBP1P53384 320 aa19.57■□□□□ 0.72
SYNGR3-204ENST00000564642 CYP4F8P98187 520 aa19.57■□□□□ 0.72
SYNGR3-204ENST00000564642 FKBP3Q00688 224 aaKnown RBP19.57■□□□□ 0.72
SYNGR3-204ENST00000564642 PPP3CAQ08209 521 aa19.57■□□□□ 0.72
SYNGR3-204ENST00000564642 CWF19L1Q69YN2 538 aaKnown RBP19.57■□□□□ 0.72
SYNGR3-204ENST00000564642 VSTM1Q6UX27 236 aa19.57■□□□□ 0.72
SYNGR3-204ENST00000564642 VITQ6UXI7 678 aa19.57■□□□□ 0.72
SYNGR3-204ENST00000564642 ARID3BQ8IVW6 561 aaPredicted RBP19.57■□□□□ 0.72
SYNGR3-204ENST00000564642 TMEM105Q8N8V8 129 aa19.57■□□□□ 0.72
SYNGR3-204ENST00000564642 STKLD1Q8NE28 680 aa19.57■□□□□ 0.72
SYNGR3-204ENST00000564642 DEPDC1BQ8WUY9 529 aa19.57■□□□□ 0.72
SYNGR3-204ENST00000564642 DPEP3Q9H4B8 488 aa19.57■□□□□ 0.72
SYNGR3-204ENST00000564642 BRD9Q9H8M2 597 aa19.57■□□□□ 0.72
SYNGR3-204ENST00000564642 TBC1D17Q9HA65 648 aa19.57■□□□□ 0.72
SYNGR3-204ENST00000564642 ZNF318Q5VUA4 2279 aa19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 NUP210Q8TEM1 1887 aaPredicted RBP19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 ZNF638Q14966 1978 aaKnown RBP19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 HEPACAM2A8MVW5 462 aa19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 TRIM66O15016 1216 aa19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 STX10O60499 249 aa19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 ASS1P00966 412 aaKnown RBP19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 AOC1P19801 751 aa19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 GTF2H1P32780 548 aa19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 RAP1GAPP47736 663 aa19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 NLRP12P59046 1061 aa19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 LRRC63Q05C16 580 aa19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 MLF2Q15773 248 aaPredicted RBP19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 PHLDB3Q6NSJ2 640 aa19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 GPIHBP1Q8IV16 184 aa19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 MFSD6LQ8IWD5 586 aa19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 YAF2Q8IY57 180 aa19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 B3GALNT2Q8NCR0 500 aa19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 CCDC150Q8NCX0 1101 aa19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 DHTKD1Q96HY7 919 aaPredicted RBP19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 TNIP3Q96KP6 325 aa19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 TMEM8AQ9HCN3 771 aa19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 ZMYM5Q9UJ78 669 aa19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 NME7Q9Y5B8 376 aa19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 PTPRDP23468 1912 aa19.56■□□□□ 0.72
SYNGR3-204ENST00000564642 ZNF263O14978 683 aa19.55■□□□□ 0.72
SYNGR3-204ENST00000564642 PI15O43692 258 aa19.55■□□□□ 0.72
SYNGR3-204ENST00000564642 NOL4O94818 638 aa19.55■□□□□ 0.72
SYNGR3-204ENST00000564642 F11P03951 625 aa19.55■□□□□ 0.72
SYNGR3-204ENST00000564642 CCNE1P24864 410 aa19.55■□□□□ 0.72
SYNGR3-204ENST00000564642 GDI1P31150 447 aa19.55■□□□□ 0.72
SYNGR3-204ENST00000564642 PMS1P54277 932 aaKnown RBP19.55■□□□□ 0.72
SYNGR3-204ENST00000564642 STARD6P59095 220 aa19.55■□□□□ 0.72
SYNGR3-204ENST00000564642 PRKCQQ04759 706 aa19.55■□□□□ 0.72
SYNGR3-204ENST00000564642 KRT39Q6A163 491 aa19.55■□□□□ 0.72
SYNGR3-204ENST00000564642 SPOPLQ6IQ16 392 aa19.55■□□□□ 0.72
SYNGR3-204ENST00000564642 MRPS31Q92665 395 aaKnown RBP19.55■□□□□ 0.72
SYNGR3-204ENST00000564642 IRF7Q92985 503 aa19.55■□□□□ 0.72
SYNGR3-204ENST00000564642 TRMT2BQ96GJ1 504 aaKnown RBP19.55■□□□□ 0.72
SYNGR3-204ENST00000564642 SPATA17Q96L03 361 aa19.55■□□□□ 0.72
SYNGR3-204ENST00000564642 CEP295NLQ96MC4 621 aa19.55■□□□□ 0.72
SYNGR3-204ENST00000564642 SDCBP2Q9H190 292 aa19.55■□□□□ 0.72
SYNGR3-204ENST00000564642 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms