RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 SOX8P57073 446 aa5.45□□□□□ -1.54
CHD9-212ENST00000564641 EXOSC9Q06265 439 aaKnown RBP5.45□□□□□ -1.54
CHD9-212ENST00000564641 BOP1Q14137 746 aaKnown RBP5.45□□□□□ -1.54
CHD9-212ENST00000564641 E2F2Q14209 437 aa5.45□□□□□ -1.54
CHD9-212ENST00000564641 PLS1Q14651 629 aa5.45□□□□□ -1.54
CHD9-212ENST00000564641 TBC1D25Q3MII6 688 aa5.45□□□□□ -1.54
CHD9-212ENST00000564641 TREML2Q5T2D2 321 aa5.45□□□□□ -1.54
CHD9-212ENST00000564641 PRAMEF17Q5VTA0 474 aa5.45□□□□□ -1.54
CHD9-212ENST00000564641 PARS2Q7L3T8 475 aaKnown RBP5.45□□□□□ -1.54
CHD9-212ENST00000564641 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.45□□□□□ -1.54
CHD9-212ENST00000564641 Q8N9P0 234 aaPredicted RBP5.45□□□□□ -1.54
CHD9-212ENST00000564641 MAP3K14Q99558 947 aa5.45□□□□□ -1.54
CHD9-212ENST00000564641 TTYH3Q9C0H2 523 aa5.45□□□□□ -1.54
CHD9-212ENST00000564641 GLOD4Q9HC38 313 aa5.45□□□□□ -1.54
CHD9-212ENST00000564641 CNNM1Q9NRU3 951 aa5.45□□□□□ -1.54
CHD9-212ENST00000564641 DUSP22Q9NRW4 184 aa5.45□□□□□ -1.54
CHD9-212ENST00000564641 ZNF213O14771 459 aa5.44□□□□□ -1.54
CHD9-212ENST00000564641 TUBB4AP04350 444 aa5.44□□□□□ -1.54
CHD9-212ENST00000564641 THP07101 528 aa5.44□□□□□ -1.54
CHD9-212ENST00000564641 PDHA1P08559 390 aa5.44□□□□□ -1.54
CHD9-212ENST00000564641 XRCC6P12956 609 aaKnown RBP eCLIP5.44□□□□□ -1.54
CHD9-212ENST00000564641 KCNJ5P48544 419 aa5.44□□□□□ -1.54
CHD9-212ENST00000564641 ZNF134P52741 427 aa5.44□□□□□ -1.54
CHD9-212ENST00000564641 KHDC1LQ5JSQ8 128 aa5.44□□□□□ -1.54
CHD9-212ENST00000564641 PCID2Q5JVF3 399 aa5.44□□□□□ -1.54
CHD9-212ENST00000564641 ZNF626Q68DY1 528 aa5.44□□□□□ -1.54
CHD9-212ENST00000564641 MAVSQ7Z434 540 aa5.44□□□□□ -1.54
CHD9-212ENST00000564641 RPL36ALQ969Q0 106 aaKnown RBP5.44□□□□□ -1.54
CHD9-212ENST00000564641 GTPBP4Q9BZE4 634 aaKnown RBP5.44□□□□□ -1.54
CHD9-212ENST00000564641 BHMT2Q9H2M3 363 aa5.44□□□□□ -1.54
CHD9-212ENST00000564641 SERTAD3Q9UJW9 196 aa5.44□□□□□ -1.54
CHD9-212ENST00000564641 BTBD3Q9Y2F9 522 aa5.44□□□□□ -1.54
CHD9-212ENST00000564641 ANKRD6Q9Y2G4 727 aa5.44□□□□□ -1.54
CHD9-212ENST00000564641 HMGXB3Q12766 1538 aa5.43□□□□□ -1.54
CHD9-212ENST00000564641 PPP6CO00743 305 aa5.43□□□□□ -1.54
CHD9-212ENST00000564641 DCLK1O15075 740 aa5.43□□□□□ -1.54
CHD9-212ENST00000564641 DNAJB5O75953 348 aa5.43□□□□□ -1.54
CHD9-212ENST00000564641 TJP3O95049 919 aa5.43□□□□□ -1.54
CHD9-212ENST00000564641 UNC5CO95185 931 aa5.43□□□□□ -1.54
CHD9-212ENST00000564641 GRPP07492 148 aa5.43□□□□□ -1.54
CHD9-212ENST00000564641 DLDP09622 509 aaKnown RBP5.43□□□□□ -1.54
CHD9-212ENST00000564641 LRPAP1P30533 357 aa5.43□□□□□ -1.54
CHD9-212ENST00000564641 HOXA4Q00056 320 aaPredicted RBP5.43□□□□□ -1.54
CHD9-212ENST00000564641 ARHGAP40Q5TG30 622 aa5.43□□□□□ -1.54
CHD9-212ENST00000564641 CATIPQ7Z7H3 387 aa5.43□□□□□ -1.54
CHD9-212ENST00000564641 LRRC71Q8N4P6 559 aa5.43□□□□□ -1.54
CHD9-212ENST00000564641 C1GALT1C1Q96EU7 318 aa5.43□□□□□ -1.54
CHD9-212ENST00000564641 FSD1LQ9BXM9 530 aa5.43□□□□□ -1.54
CHD9-212ENST00000564641 SSX2IPQ9Y2D8 614 aa5.43□□□□□ -1.54
CHD9-212ENST00000564641 STXBP5LQ9Y2K9 1186 aa5.43□□□□□ -1.54
CHD9-212ENST00000564641 SETD1BQ9UPS6 1966 aaKnown RBP5.42□□□□□ -1.54
CHD9-212ENST00000564641 PRRT4C9JH25 899 aa5.42□□□□□ -1.54
CHD9-212ENST00000564641 MYO1CO00159 1063 aa5.42□□□□□ -1.54
CHD9-212ENST00000564641 HDCP19113 662 aa5.42□□□□□ -1.54
CHD9-212ENST00000564641 IBSPP21815 317 aaPredicted RBP5.42□□□□□ -1.54
CHD9-212ENST00000564641 CTGFP29279 349 aa5.42□□□□□ -1.54
CHD9-212ENST00000564641 LIPAP38571 399 aa5.42□□□□□ -1.54
CHD9-212ENST00000564641 PDE1AP54750 535 aa5.42□□□□□ -1.54
CHD9-212ENST00000564641 WNT3P56703 355 aa5.42□□□□□ -1.54
CHD9-212ENST00000564641 LILRA4P59901 499 aa5.42□□□□□ -1.54
CHD9-212ENST00000564641 MAPK7Q13164 816 aa5.42□□□□□ -1.54
CHD9-212ENST00000564641 BRDTQ58F21 947 aaPredicted RBP5.42□□□□□ -1.54
CHD9-212ENST00000564641 ATAT1Q5SQI0 421 aa5.42□□□□□ -1.54
CHD9-212ENST00000564641 SLC9A4Q6AI14 798 aa5.42□□□□□ -1.54
CHD9-212ENST00000564641 C11orf87Q6NUJ2 197 aa5.42□□□□□ -1.54
CHD9-212ENST00000564641 PCSK9Q8NBP7 692 aaKnown RBP5.42□□□□□ -1.54
CHD9-212ENST00000564641 ATG4AQ8WYN0 398 aa5.42□□□□□ -1.54
CHD9-212ENST00000564641 HPS3Q969F9 1004 aa5.42□□□□□ -1.54
CHD9-212ENST00000564641 ADAMTS5Q9UNA0 930 aa5.42□□□□□ -1.54
CHD9-212ENST00000564641 MED16Q9Y2X0 877 aa5.42□□□□□ -1.54
CHD9-212ENST00000564641 BAZ1AQ9NRL2 1556 aaPredicted RBP5.42□□□□□ -1.54
CHD9-212ENST00000564641 A1L4Q6 167 aa5.41□□□□□ -1.54
CHD9-212ENST00000564641 TISP43B9A030 160 aa5.41□□□□□ -1.54
CHD9-212ENST00000564641 H7C1Q1 480 aa5.41□□□□□ -1.54
CHD9-212ENST00000564641 FESP07332 822 aa5.41□□□□□ -1.54
CHD9-212ENST00000564641 ENGP17813 658 aa5.41□□□□□ -1.54
CHD9-212ENST00000564641 CLCN2P51788 898 aa5.41□□□□□ -1.54
CHD9-212ENST00000564641 NEK2P51955 445 aa5.41□□□□□ -1.54
CHD9-212ENST00000564641 TPTEP56180 551 aa5.41□□□□□ -1.54
CHD9-212ENST00000564641 RGS7BPQ6MZT1 257 aaPredicted RBP5.41□□□□□ -1.54
CHD9-212ENST00000564641 TRIM72Q6ZMU5 477 aa5.41□□□□□ -1.54
CHD9-212ENST00000564641 ZNF66Q6ZN08 573 aa5.41□□□□□ -1.54
CHD9-212ENST00000564641 YTHDF3Q7Z739 585 aaKnown RBP5.41□□□□□ -1.54
CHD9-212ENST00000564641 ZNF366Q8N895 744 aa5.41□□□□□ -1.54
CHD9-212ENST00000564641 ABHD11Q8NFV4 315 aa5.41□□□□□ -1.54
CHD9-212ENST00000564641 DENND1AQ8TEH3 1009 aa5.41□□□□□ -1.54
CHD9-212ENST00000564641 FCRL4Q96PJ5 515 aa5.41□□□□□ -1.54
CHD9-212ENST00000564641 PIH1D1Q9NWS0 290 aaKnown RBP5.41□□□□□ -1.54
CHD9-212ENST00000564641 XPR1Q9UBH6 696 aa5.41□□□□□ -1.54
CHD9-212ENST00000564641 NDRG4Q9ULP0 352 aaKnown RBP5.41□□□□□ -1.54
CHD9-212ENST00000564641 PCDHA6Q9UN73 950 aa5.41□□□□□ -1.54
CHD9-212ENST00000564641 TBC1D30Q9Y2I9 924 aa5.41□□□□□ -1.54
CHD9-212ENST00000564641 KRTAP29-1A8MX34 341 aaPredicted RBP5.4□□□□□ -1.54
CHD9-212ENST00000564641 SMIM22K7EJ46 135 aa5.4□□□□□ -1.54
CHD9-212ENST00000564641 ERC2O15083 957 aa5.4□□□□□ -1.54
CHD9-212ENST00000564641 OFD1O75665 1012 aa5.4□□□□□ -1.54
CHD9-212ENST00000564641 PRKCBP05771 671 aa5.4□□□□□ -1.54
CHD9-212ENST00000564641 CYP2D6P10635 497 aa5.4□□□□□ -1.54
CHD9-212ENST00000564641 PDE6CP51160 858 aa5.4□□□□□ -1.54
CHD9-212ENST00000564641 SLC18B1Q6NT16 456 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms