RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 ZNF785A8K8V0 405 aa6.1□□□□□ -1.43
LINC00254-201ENST00000563416 TOR1BO14657 336 aa6.1□□□□□ -1.43
LINC00254-201ENST00000563416 RARBP10826 455 aa6.1□□□□□ -1.43
LINC00254-201ENST00000563416 RPS7P62081 194 aaKnown RBP6.1□□□□□ -1.43
LINC00254-201ENST00000563416 PSMC1P62191 440 aaKnown RBP6.1□□□□□ -1.43
LINC00254-201ENST00000563416 FPGSQ05932 587 aa6.1□□□□□ -1.43
LINC00254-201ENST00000563416 KIF22Q14807 665 aa6.1□□□□□ -1.43
LINC00254-201ENST00000563416 PPP2R5AQ15172 486 aa6.1□□□□□ -1.43
LINC00254-201ENST00000563416 HSP90AB2PQ58FF8 381 aa6.1□□□□□ -1.43
LINC00254-201ENST00000563416 SP5Q6BEB4 398 aaPredicted RBP6.1□□□□□ -1.43
LINC00254-201ENST00000563416 CXorf57Q6NSI4 855 aaKnown RBP6.1□□□□□ -1.43
LINC00254-201ENST00000563416 GPR149Q86SP6 731 aa6.1□□□□□ -1.43
LINC00254-201ENST00000563416 TPH2Q8IWU9 490 aa6.1□□□□□ -1.43
LINC00254-201ENST00000563416 DIS3LQ8TF46 1054 aaKnown RBP6.1□□□□□ -1.43
LINC00254-201ENST00000563416 JDP2Q8WYK2 163 aa6.1□□□□□ -1.43
LINC00254-201ENST00000563416 SLC9A6Q92581 669 aa6.1□□□□□ -1.43
LINC00254-201ENST00000563416 DDX17Q92841 729 aaKnown RBP6.1□□□□□ -1.43
LINC00254-201ENST00000563416 NACC2Q96BF6 587 aa6.1□□□□□ -1.43
LINC00254-201ENST00000563416 PTCD3Q96EY7 689 aaKnown RBP6.1□□□□□ -1.43
LINC00254-201ENST00000563416 SLC35A4Q96G79 324 aa6.1□□□□□ -1.43
LINC00254-201ENST00000563416 LRGUKQ96M69 825 aa6.1□□□□□ -1.43
LINC00254-201ENST00000563416 C1orf43Q9BWL3 253 aa6.1□□□□□ -1.43
LINC00254-201ENST00000563416 MRPL46Q9H2W6 279 aaKnown RBP6.1□□□□□ -1.43
LINC00254-201ENST00000563416 SARS2Q9NP81 518 aaKnown RBP6.1□□□□□ -1.43
LINC00254-201ENST00000563416 CASS4Q9NQ75 786 aa6.1□□□□□ -1.43
LINC00254-201ENST00000563416 DMRT1Q9Y5R6 373 aa6.1□□□□□ -1.43
LINC00254-201ENST00000563416 COL22A1Q8NFW1 1626 aaPredicted RBP6.1□□□□□ -1.43
LINC00254-201ENST00000563416 MED1Q15648 1581 aaPredicted RBP6.1□□□□□ -1.43
LINC00254-201ENST00000563416 AKAP12Q02952 1782 aa6.09□□□□□ -1.43
LINC00254-201ENST00000563416 TRPM3Q9HCF6 1732 aaPredicted RBP6.09□□□□□ -1.43
LINC00254-201ENST00000563416 CRYBG1Q9Y4K1 1723 aa6.09□□□□□ -1.43
LINC00254-201ENST00000563416 E7ENX8 843 aa6.09□□□□□ -1.43
LINC00254-201ENST00000563416 ANXA11P50995 505 aaKnown RBP6.09□□□□□ -1.43
LINC00254-201ENST00000563416 NKX6-1P78426 367 aaPredicted RBP6.09□□□□□ -1.43
LINC00254-201ENST00000563416 TAP2Q03519 686 aa6.09□□□□□ -1.43
LINC00254-201ENST00000563416 MPP3Q13368 585 aa6.09□□□□□ -1.43
LINC00254-201ENST00000563416 ZNF267Q14586 743 aaPredicted RBP6.09□□□□□ -1.43
LINC00254-201ENST00000563416 GEN1Q17RS7 908 aa6.09□□□□□ -1.43
LINC00254-201ENST00000563416 TAPT1Q6NXT6 567 aa6.09□□□□□ -1.43
LINC00254-201ENST00000563416 DENND1CQ8IV53 801 aa6.09□□□□□ -1.43
LINC00254-201ENST00000563416 CHPFQ8IZ52 775 aa6.09□□□□□ -1.43
LINC00254-201ENST00000563416 Q8NA96 180 aa6.09□□□□□ -1.43
LINC00254-201ENST00000563416 BEND2Q8NDZ0 799 aa6.09□□□□□ -1.43
LINC00254-201ENST00000563416 LINC00476Q8WZB0 136 aa6.09□□□□□ -1.43
LINC00254-201ENST00000563416 TRIB1Q96RU8 372 aa6.09□□□□□ -1.43
LINC00254-201ENST00000563416 CNPPD1Q9BV87 410 aa6.09□□□□□ -1.43
LINC00254-201ENST00000563416 SLITRK6Q9H5Y7 841 aa6.09□□□□□ -1.43
LINC00254-201ENST00000563416 GPR35Q9HC97 309 aa6.09□□□□□ -1.43
LINC00254-201ENST00000563416 CNNM1Q9NRU3 951 aa6.09□□□□□ -1.43
LINC00254-201ENST00000563416 INTS13Q9NVM9 706 aa6.09□□□□□ -1.43
LINC00254-201ENST00000563416 SYBUQ9NX95 663 aa6.09□□□□□ -1.43
LINC00254-201ENST00000563416 CTTNBP2NLQ9P2B4 639 aa6.09□□□□□ -1.43
LINC00254-201ENST00000563416 PLEKHH1Q9ULM0 1364 aa6.08□□□□□ -1.44
LINC00254-201ENST00000563416 H3BML4 177 aa6.08□□□□□ -1.44
LINC00254-201ENST00000563416 POLRMTO00411 1230 aaKnown RBP6.08□□□□□ -1.44
LINC00254-201ENST00000563416 MATN4O95460 622 aa6.08□□□□□ -1.44
LINC00254-201ENST00000563416 ALDH2P05091 517 aa6.08□□□□□ -1.44
LINC00254-201ENST00000563416 ZNF135P52742 658 aaPredicted RBP6.08□□□□□ -1.44
LINC00254-201ENST00000563416 SCAPQ12770 1279 aa6.08□□□□□ -1.44
LINC00254-201ENST00000563416 DYRK1AQ13627 763 aa6.08□□□□□ -1.44
LINC00254-201ENST00000563416 PLS1Q14651 629 aa6.08□□□□□ -1.44
LINC00254-201ENST00000563416 NFE2Q16621 373 aaPredicted RBP6.08□□□□□ -1.44
LINC00254-201ENST00000563416 KLHDC4Q8TBB5 520 aa6.08□□□□□ -1.44
LINC00254-201ENST00000563416 SLC35G2Q8TBE7 412 aa6.08□□□□□ -1.44
LINC00254-201ENST00000563416 SNX19Q92543 992 aa6.08□□□□□ -1.44
LINC00254-201ENST00000563416 TMEM125Q96AQ2 219 aa6.08□□□□□ -1.44
LINC00254-201ENST00000563416 Q96MF0 132 aa6.08□□□□□ -1.44
LINC00254-201ENST00000563416 SIN3AQ96ST3 1273 aa6.08□□□□□ -1.44
LINC00254-201ENST00000563416 CGRRF1Q99675 332 aa6.08□□□□□ -1.44
LINC00254-201ENST00000563416 KRTAP4-5Q9BYR2 181 aa6.08□□□□□ -1.44
LINC00254-201ENST00000563416 PCDHA1Q9Y5I3 950 aa6.08□□□□□ -1.44
LINC00254-201ENST00000563416 C1orf167Q5SNV9 1468 aa6.08□□□□□ -1.44
LINC00254-201ENST00000563416 RALGAPBQ86X10 1494 aa6.08□□□□□ -1.44
LINC00254-201ENST00000563416 ALS2Q96Q42 1657 aa6.07□□□□□ -1.44
LINC00254-201ENST00000563416 MAST3O60307 1309 aa6.07□□□□□ -1.44
LINC00254-201ENST00000563416 E9PLN8 166 aa6.07□□□□□ -1.44
LINC00254-201ENST00000563416 SOAT2O75908 522 aa6.07□□□□□ -1.44
LINC00254-201ENST00000563416 PARNO95453 639 aaKnown RBP6.07□□□□□ -1.44
LINC00254-201ENST00000563416 ESRRBO95718 433 aa6.07□□□□□ -1.44
LINC00254-201ENST00000563416 LPOP22079 712 aaPredicted RBP6.07□□□□□ -1.44
LINC00254-201ENST00000563416 PHKA1P46020 1223 aa6.07□□□□□ -1.44
LINC00254-201ENST00000563416 SEC24CP53992 1094 aa6.07□□□□□ -1.44
LINC00254-201ENST00000563416 HABP2Q14520 560 aaPredicted RBP6.07□□□□□ -1.44
LINC00254-201ENST00000563416 HLXQ14774 488 aaPredicted RBP6.07□□□□□ -1.44
LINC00254-201ENST00000563416 ERCC6LQ2NKX8 1250 aa6.07□□□□□ -1.44
LINC00254-201ENST00000563416 MINDY4Q4G0A6 757 aa6.07□□□□□ -1.44
LINC00254-201ENST00000563416 FAM102BQ5T8I3 360 aa6.07□□□□□ -1.44
LINC00254-201ENST00000563416 EPM2AIP1Q7L775 607 aaPredicted RBP6.07□□□□□ -1.44
LINC00254-201ENST00000563416 DAAM2Q86T65 1068 aa6.07□□□□□ -1.44
LINC00254-201ENST00000563416 PPP1R3BQ86XI6 285 aa6.07□□□□□ -1.44
LINC00254-201ENST00000563416 LNX2Q8N448 690 aa6.07□□□□□ -1.44
LINC00254-201ENST00000563416 SLC44A3Q8N4M1 653 aa6.07□□□□□ -1.44
LINC00254-201ENST00000563416 VKORC1Q9BQB6 163 aa6.07□□□□□ -1.44
LINC00254-201ENST00000563416 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.07□□□□□ -1.44
LINC00254-201ENST00000563416 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.07□□□□□ -1.44
LINC00254-201ENST00000563416 TULP4Q9NRJ4 1543 aa6.07□□□□□ -1.44
LINC00254-201ENST00000563416 CLSPNQ9HAW4 1339 aa6.06□□□□□ -1.44
LINC00254-201ENST00000563416 SUN1O94901 812 aa6.06□□□□□ -1.44
LINC00254-201ENST00000563416 ZFPL1O95159 310 aa6.06□□□□□ -1.44
LINC00254-201ENST00000563416 SCGB1D2O95969 90 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms