RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 PSMC3P17980 439 aa20.32■□□□□ 0.84
TRADD-203ENST00000563348 STARD6P59095 220 aa20.32■□□□□ 0.84
TRADD-203ENST00000563348 ZNF667Q5HYK9 610 aa20.32■□□□□ 0.84
TRADD-203ENST00000563348 GPR158Q5T848 1215 aa20.32■□□□□ 0.84
TRADD-203ENST00000563348 SDHAF4Q5VUM1 108 aa20.32■□□□□ 0.84
TRADD-203ENST00000563348 VSTM1Q6UX27 236 aa20.32■□□□□ 0.84
TRADD-203ENST00000563348 VITQ6UXI7 678 aa20.32■□□□□ 0.84
TRADD-203ENST00000563348 ARID3BQ8IVW6 561 aaPredicted RBP20.32■□□□□ 0.84
TRADD-203ENST00000563348 MFSD6LQ8IWD5 586 aa20.32■□□□□ 0.84
TRADD-203ENST00000563348 MYCBPAPQ8TBZ2 947 aa20.32■□□□□ 0.84
TRADD-203ENST00000563348 TAF4BQ92750 862 aa20.32■□□□□ 0.84
TRADD-203ENST00000563348 MYLPFQ96A32 169 aa20.32■□□□□ 0.84
TRADD-203ENST00000563348 GCNAQ96QF7 691 aa20.32■□□□□ 0.84
TRADD-203ENST00000563348 TASP1Q9H6P5 420 aa20.32■□□□□ 0.84
TRADD-203ENST00000563348 HEPACAM2A8MVW5 462 aa20.31■□□□□ 0.84
TRADD-203ENST00000563348 A8MXQ7 604 aa20.31■□□□□ 0.84
TRADD-203ENST00000563348 GALR2O43603 387 aaPredicted RBP20.31■□□□□ 0.84
TRADD-203ENST00000563348 KINO60870 393 aaKnown RBP20.31■□□□□ 0.84
TRADD-203ENST00000563348 NOL4O94818 638 aa20.31■□□□□ 0.84
TRADD-203ENST00000563348 KRT13P13646 458 aa20.31■□□□□ 0.84
TRADD-203ENST00000563348 PTPN1P18031 435 aaKnown RBP20.31■□□□□ 0.84
TRADD-203ENST00000563348 WEE1P30291 646 aa20.31■□□□□ 0.84
TRADD-203ENST00000563348 PTPN5P54829 565 aa20.31■□□□□ 0.84
TRADD-203ENST00000563348 PRKCQQ04759 706 aa20.31■□□□□ 0.84
TRADD-203ENST00000563348 TCF15Q12870 199 aa20.31■□□□□ 0.84
TRADD-203ENST00000563348 GRM2Q14416 872 aa20.31■□□□□ 0.84
TRADD-203ENST00000563348 TMEM150AQ86TG1 271 aa20.31■□□□□ 0.84
TRADD-203ENST00000563348 SCN4BQ8IWT1 228 aa20.31■□□□□ 0.84
TRADD-203ENST00000563348 DEPDC1BQ8WUY9 529 aa20.31■□□□□ 0.84
TRADD-203ENST00000563348 PCED1BQ96HM7 432 aa20.31■□□□□ 0.84
TRADD-203ENST00000563348 CHMP5Q9NZZ3 219 aa20.31■□□□□ 0.84
TRADD-203ENST00000563348 ZMYM5Q9UJ78 669 aa20.31■□□□□ 0.84
TRADD-203ENST00000563348 SLC38A8A6NNN8 435 aa20.3■□□□□ 0.84
TRADD-203ENST00000563348 CETN3O15182 167 aa20.3■□□□□ 0.84
TRADD-203ENST00000563348 RFX1P22670 979 aa20.3■□□□□ 0.84
TRADD-203ENST00000563348 BDNFP23560 247 aa20.3■□□□□ 0.84
TRADD-203ENST00000563348 CDH8P55286 799 aa20.3■□□□□ 0.84
TRADD-203ENST00000563348 NLRP12P59046 1061 aa20.3■□□□□ 0.84
TRADD-203ENST00000563348 CYP4F8P98187 520 aa20.3■□□□□ 0.84
TRADD-203ENST00000563348 PPP3CAQ08209 521 aa20.3■□□□□ 0.84
TRADD-203ENST00000563348 MLF2Q15773 248 aaPredicted RBP20.3■□□□□ 0.84
TRADD-203ENST00000563348 ADSSL1Q8N142 457 aa20.3■□□□□ 0.84
TRADD-203ENST00000563348 DNASE1L2Q92874 299 aa20.3■□□□□ 0.84
TRADD-203ENST00000563348 RSPRY1Q96DX4 576 aa20.3■□□□□ 0.84
TRADD-203ENST00000563348 TRMT2BQ96GJ1 504 aaKnown RBP20.3■□□□□ 0.84
TRADD-203ENST00000563348 MYRFLQ96LU7 910 aa20.3■□□□□ 0.84
TRADD-203ENST00000563348 CEP295NLQ96MC4 621 aa20.3■□□□□ 0.84
TRADD-203ENST00000563348 DDX23Q9BUQ8 820 aaKnown RBP20.3■□□□□ 0.84
TRADD-203ENST00000563348 SLC46A2Q9BY10 475 aa20.3■□□□□ 0.84
TRADD-203ENST00000563348 SMYD3Q9H7B4 428 aa20.3■□□□□ 0.84
TRADD-203ENST00000563348 BRD9Q9H8M2 597 aa20.3■□□□□ 0.84
TRADD-203ENST00000563348 MAGED2Q9UNF1 606 aaPredicted RBP20.3■□□□□ 0.84
TRADD-203ENST00000563348 SOBPA7XYQ1 873 aa20.29■□□□□ 0.84
TRADD-203ENST00000563348 ASS1P00966 412 aaKnown RBP20.29■□□□□ 0.84
TRADD-203ENST00000563348 HLA-DRAP01903 254 aa20.29■□□□□ 0.84
TRADD-203ENST00000563348 TRIM49P0CI25 452 aa20.29■□□□□ 0.84
TRADD-203ENST00000563348 TRIM49CP0CI26 452 aa20.29■□□□□ 0.84
TRADD-203ENST00000563348 P4HA1P13674 534 aa20.29■□□□□ 0.84
TRADD-203ENST00000563348 GDI1P31150 447 aa20.29■□□□□ 0.84
TRADD-203ENST00000563348 GCLMP48507 274 aa20.29■□□□□ 0.84
TRADD-203ENST00000563348 CYP27A1Q02318 531 aa20.29■□□□□ 0.84
TRADD-203ENST00000563348 NHLH1Q02575 133 aa20.29■□□□□ 0.84
TRADD-203ENST00000563348 MDH1BQ5I0G3 518 aa20.29■□□□□ 0.84
TRADD-203ENST00000563348 GPIHBP1Q8IV16 184 aa20.29■□□□□ 0.84
TRADD-203ENST00000563348 STKLD1Q8NE28 680 aa20.29■□□□□ 0.84
TRADD-203ENST00000563348 IRF7Q92985 503 aa20.29■□□□□ 0.84
TRADD-203ENST00000563348 ELMO3Q96BJ8 720 aa20.29■□□□□ 0.84
TRADD-203ENST00000563348 EEF2KMTQ96G04 330 aa20.29■□□□□ 0.84
TRADD-203ENST00000563348 SPATA17Q96L03 361 aa20.29■□□□□ 0.84
TRADD-203ENST00000563348 DPEP3Q9H4B8 488 aa20.29■□□□□ 0.84
TRADD-203ENST00000563348 TRPV5Q9NQA5 729 aa20.29■□□□□ 0.84
TRADD-203ENST00000563348 OBP2AQ9NY56 170 aa20.29■□□□□ 0.84
TRADD-203ENST00000563348 UXTQ9UBK9 157 aaPredicted RBP20.29■□□□□ 0.84
TRADD-203ENST00000563348 KMT2EQ8IZD2 1858 aa20.28■□□□□ 0.84
TRADD-203ENST00000563348 DDX6P26196 483 aaKnown RBP eCLIP20.28■□□□□ 0.84
TRADD-203ENST00000563348 GTF2H1P32780 548 aa20.28■□□□□ 0.84
TRADD-203ENST00000563348 GRIK1P39086 918 aa20.28■□□□□ 0.84
TRADD-203ENST00000563348 FKBP3Q00688 224 aaKnown RBP20.28■□□□□ 0.84
TRADD-203ENST00000563348 ANKRD40Q6AI12 368 aa20.28■□□□□ 0.84
TRADD-203ENST00000563348 B3GALNT2Q8NCR0 500 aa20.28■□□□□ 0.84
TRADD-203ENST00000563348 LRRC3BQ96PB8 259 aa20.28■□□□□ 0.84
TRADD-203ENST00000563348 TSG101Q99816 390 aa20.28■□□□□ 0.84
TRADD-203ENST00000563348 SDCBP2Q9H190 292 aa20.28■□□□□ 0.84
TRADD-203ENST00000563348 IRF2BPLQ9H1B7 796 aa20.28■□□□□ 0.84
TRADD-203ENST00000563348 MAN1B1Q9UKM7 699 aa20.28■□□□□ 0.84
TRADD-203ENST00000563348 SIT1Q9Y3P8 196 aa20.28■□□□□ 0.84
TRADD-203ENST00000563348 NCANO14594 1321 aa20.27■□□□□ 0.84
TRADD-203ENST00000563348 KANSL1LA0AUZ9 987 aa20.27■□□□□ 0.84
TRADD-203ENST00000563348 DPYSL4O14531 572 aa20.27■□□□□ 0.84
TRADD-203ENST00000563348 ZNF263O14978 683 aa20.27■□□□□ 0.84
TRADD-203ENST00000563348 CLSTN1O94985 981 aa20.27■□□□□ 0.84
TRADD-203ENST00000563348 EPB41P11171 864 aaKnown RBP20.27■□□□□ 0.84
TRADD-203ENST00000563348 PIK3CAP42336 1068 aa20.27■□□□□ 0.84
TRADD-203ENST00000563348 RAP1GAPP47736 663 aa20.27■□□□□ 0.84
TRADD-203ENST00000563348 PMS1P54277 932 aaKnown RBP20.27■□□□□ 0.84
TRADD-203ENST00000563348 FCHO2Q0JRZ9 810 aa20.27■□□□□ 0.84
TRADD-203ENST00000563348 ISM2Q6H9L7 571 aa20.27■□□□□ 0.84
TRADD-203ENST00000563348 SCARA5Q6ZMJ2 495 aa20.27■□□□□ 0.84
TRADD-203ENST00000563348 MON1AQ86VX9 555 aa20.27■□□□□ 0.84
TRADD-203ENST00000563348 ZC3H3Q8IXZ2 948 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms