RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 VPS11Q9H270 941 aa13.75□□□□□ -0.21
USB1-207ENST00000563149 ACSS3Q9H6R3 686 aa13.75□□□□□ -0.21
USB1-207ENST00000563149 HOXC10Q9NYD6 342 aa13.75□□□□□ -0.21
USB1-207ENST00000563149 DONSONQ9NYP3 566 aa13.75□□□□□ -0.21
USB1-207ENST00000563149 IFNB1P01574 187 aa13.74□□□□□ -0.21
USB1-207ENST00000563149 WEE2P0C1S8 567 aa13.74□□□□□ -0.21
USB1-207ENST00000563149 TROVE2P10155 538 aaKnown RBP eCLIP13.74□□□□□ -0.21
USB1-207ENST00000563149 KDELR1P24390 212 aa13.74□□□□□ -0.21
USB1-207ENST00000563149 PSMA2P25787 234 aa13.74□□□□□ -0.21
USB1-207ENST00000563149 MYL6P60660 151 aa13.74□□□□□ -0.21
USB1-207ENST00000563149 OTUD4Q01804 1114 aaKnown RBP13.74□□□□□ -0.21
USB1-207ENST00000563149 SLC25A11Q02978 314 aaKnown RBP13.74□□□□□ -0.21
USB1-207ENST00000563149 SEPT7Q16181 437 aaKnown RBP13.74□□□□□ -0.21
USB1-207ENST00000563149 WASHC2DQ5SRD0 308 aa13.74□□□□□ -0.21
USB1-207ENST00000563149 WDR78Q5VTH9 848 aa13.74□□□□□ -0.21
USB1-207ENST00000563149 IER5Q5VY09 327 aa13.74□□□□□ -0.21
USB1-207ENST00000563149 TXNRD3NBQ6F5E7 133 aa13.74□□□□□ -0.21
USB1-207ENST00000563149 LVRNQ6Q4G3 990 aa13.74□□□□□ -0.21
USB1-207ENST00000563149 ACTL9Q8TC94 416 aa13.74□□□□□ -0.21
USB1-207ENST00000563149 RSAD2Q8WXG1 361 aa13.74□□□□□ -0.21
USB1-207ENST00000563149 JDP2Q8WYK2 163 aa13.74□□□□□ -0.21
USB1-207ENST00000563149 CPT1BQ92523 772 aa13.74□□□□□ -0.21
USB1-207ENST00000563149 MAK16Q9BXY0 300 aaKnown RBP13.74□□□□□ -0.21
USB1-207ENST00000563149 GRID1Q9ULK0 1009 aa13.74□□□□□ -0.21
USB1-207ENST00000563149 TRIM33Q9UPN9 1127 aa13.74□□□□□ -0.21
USB1-207ENST00000563149 CLUHO75153 1309 aa13.74□□□□□ -0.21
USB1-207ENST00000563149 A0A1W2PPM1 405 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 MSCO60682 206 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 RPSAP08865 295 aaKnown RBP13.73□□□□□ -0.21
USB1-207ENST00000563149 KRT3P12035 628 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 DPEP1P16444 411 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 KRT4P19013 534 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 CDCA2Q69YH5 1023 aaPredicted RBP13.73□□□□□ -0.21
USB1-207ENST00000563149 OTOAQ7RTW8 1153 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 UTP4Q969X6 686 aaKnown RBP13.73□□□□□ -0.21
USB1-207ENST00000563149 HAUS1Q96CS2 278 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 FAM167AQ96KS9 214 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 ACO2Q99798 780 aaKnown RBP13.73□□□□□ -0.21
USB1-207ENST00000563149 MTMR12Q9C0I1 747 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 C2orf40Q9H1Z8 148 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 KIF9Q9HAQ2 790 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 SLCO1B3Q9NPD5 702 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 LNPEPQ9UIQ6 1025 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 CPSF3Q9UKF6 684 aaKnown RBP13.73□□□□□ -0.21
USB1-207ENST00000563149 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.73□□□□□ -0.21
USB1-207ENST00000563149 A8MUI8 341 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 CST8O60676 142 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 DIAPH2O60879 1101 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 LRCH4O75427 683 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 SPAG6O75602 509 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 HARSP12081 509 aaKnown RBP13.73□□□□□ -0.21
USB1-207ENST00000563149 IBSPP21815 317 aaPredicted RBP13.73□□□□□ -0.21
USB1-207ENST00000563149 PTPN4P29074 926 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 RPL22P35268 128 aaKnown RBP13.73□□□□□ -0.21
USB1-207ENST00000563149 TNFSF9P41273 254 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 NBPF12Q5TAG4 269 aaPredicted RBP13.73□□□□□ -0.21
USB1-207ENST00000563149 ZNF772Q68DY9 489 aaPredicted RBP13.73□□□□□ -0.21
USB1-207ENST00000563149 C3orf62Q6ZUJ4 267 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 CCDC125Q86Z20 511 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 ANKMY2Q8IV38 441 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 ZBTB8OSQ8IWT0 167 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 PALM2Q8IXS6 379 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 PDIK1LQ8N165 341 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 MZB1Q8WU39 189 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 THOC1Q96FV9 657 aaKnown RBP13.73□□□□□ -0.21
USB1-207ENST00000563149 ANKRD36BP1Q96IX9 119 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 PAFAH2Q99487 392 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 TCHPQ9BT92 498 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 TLE6Q9H808 572 aa13.73□□□□□ -0.21
USB1-207ENST00000563149 SCAF8Q9UPN6 1271 aaKnown RBP13.73□□□□□ -0.21
USB1-207ENST00000563149 IQANK1A0A1B0GTG1 560 aa13.72□□□□□ -0.21
USB1-207ENST00000563149 APOC4-APOC2K7ER74 178 aa13.72□□□□□ -0.21
USB1-207ENST00000563149 B4GALT4O60513 344 aa13.72□□□□□ -0.21
USB1-207ENST00000563149 LMNAP02545 664 aaKnown RBP13.72□□□□□ -0.21
USB1-207ENST00000563149 TNNC2P02585 160 aa13.72□□□□□ -0.21
USB1-207ENST00000563149 APOC2P02655 101 aa13.72□□□□□ -0.21
USB1-207ENST00000563149 T-ENOLP0DO92 83 aa13.72□□□□□ -0.21
USB1-207ENST00000563149 STIP1P31948 543 aaKnown RBP13.72□□□□□ -0.21
USB1-207ENST00000563149 RFC1P35251 1148 aaPredicted RBP13.72□□□□□ -0.21
USB1-207ENST00000563149 STAT5BP51692 787 aa13.72□□□□□ -0.21
USB1-207ENST00000563149 HMGCS2P54868 508 aa13.72□□□□□ -0.21
USB1-207ENST00000563149 TFDP1Q14186 410 aa13.72□□□□□ -0.21
USB1-207ENST00000563149 MXD4Q14582 209 aaPredicted RBP13.72□□□□□ -0.21
USB1-207ENST00000563149 ZNF699Q32M78 642 aa13.72□□□□□ -0.21
USB1-207ENST00000563149 SEZ6Q53EL9 994 aa13.72□□□□□ -0.21
USB1-207ENST00000563149 HP1BP3Q5SSJ5 553 aaPredicted RBP13.72□□□□□ -0.21
USB1-207ENST00000563149 FNBP1LQ5T0N5 605 aa13.72□□□□□ -0.21
USB1-207ENST00000563149 NLRP9Q7RTR0 991 aa13.72□□□□□ -0.21
USB1-207ENST00000563149 RHPN2Q8IUC4 686 aa13.72□□□□□ -0.21
USB1-207ENST00000563149 BANPQ8N9N5 519 aa13.72□□□□□ -0.21
USB1-207ENST00000563149 FBXO36Q8NEA4 188 aa13.72□□□□□ -0.21
USB1-207ENST00000563149 CMASQ8NFW8 434 aaPredicted RBP13.72□□□□□ -0.21
USB1-207ENST00000563149 ZNF526Q8TF50 670 aaPredicted RBP13.72□□□□□ -0.21
USB1-207ENST00000563149 FBXO41Q8TF61 875 aa13.72□□□□□ -0.21
USB1-207ENST00000563149 TFAP2BQ92481 460 aa13.72□□□□□ -0.21
USB1-207ENST00000563149 SPOCK2Q92563 424 aa13.72□□□□□ -0.21
USB1-207ENST00000563149 SLC7A6OSQ96CW6 309 aaPredicted RBP13.72□□□□□ -0.21
USB1-207ENST00000563149 PCYT2Q99447 389 aa13.72□□□□□ -0.21
USB1-207ENST00000563149 SLC5A4Q9NY91 659 aa13.72□□□□□ -0.21
USB1-207ENST00000563149 HACL1Q9UJ83 578 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms