RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 CFAP221Q4G0U5 840 aa16.42■□□□□ 0.22
CCNDBP1-203ENST00000562553 TCERG1LQ5VWI1 586 aa16.42■□□□□ 0.22
CCNDBP1-203ENST00000562553 KRT39Q6A163 491 aa16.42■□□□□ 0.22
CCNDBP1-203ENST00000562553 GAREM2Q75VX8 874 aa16.42■□□□□ 0.22
CCNDBP1-203ENST00000562553 ITIH5Q86UX2 942 aa16.42■□□□□ 0.22
CCNDBP1-203ENST00000562553 UBALD2Q8IYN6 164 aa16.42■□□□□ 0.22
CCNDBP1-203ENST00000562553 SLC44A3Q8N4M1 653 aa16.42■□□□□ 0.22
CCNDBP1-203ENST00000562553 LEMD2Q8NC56 503 aa16.42■□□□□ 0.22
CCNDBP1-203ENST00000562553 TAF4BQ92750 862 aa16.42■□□□□ 0.22
CCNDBP1-203ENST00000562553 PCED1BQ96HM7 432 aa16.42■□□□□ 0.22
CCNDBP1-203ENST00000562553 ZSWIM3Q96MP5 696 aa16.42■□□□□ 0.22
CCNDBP1-203ENST00000562553 GBP4Q96PP9 640 aa16.42■□□□□ 0.22
CCNDBP1-203ENST00000562553 KXD1Q9BQD3 176 aa16.42■□□□□ 0.22
CCNDBP1-203ENST00000562553 ABCB6Q9NP58 842 aa16.42■□□□□ 0.22
CCNDBP1-203ENST00000562553 HMGXB4Q9UGU5 601 aa16.42■□□□□ 0.22
CCNDBP1-203ENST00000562553 DUSP12Q9UNI6 340 aa16.42■□□□□ 0.22
CCNDBP1-203ENST00000562553 MYH10P35580 1976 aa16.42■□□□□ 0.22
CCNDBP1-203ENST00000562553 ZNF638Q14966 1978 aaKnown RBP16.42■□□□□ 0.22
CCNDBP1-203ENST00000562553 NUP210Q8TEM1 1887 aaPredicted RBP16.42■□□□□ 0.22
CCNDBP1-203ENST00000562553 ZDBF2Q9HCK1 2354 aa16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 MICAL2O94851 1124 aa16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 HMGA1P17096 107 aaKnown RBP16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 PTPN1P18031 435 aaKnown RBP16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 CYP27A1Q02318 531 aa16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 ORC1Q13415 861 aa16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 VEPH1Q14D04 833 aa16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 CBWD6Q4V339 395 aa16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 CBWD3Q5JTY5 395 aa16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 CBWD5Q5RIA9 395 aa16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 STXBP5Q5T5C0 1151 aa16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 C4orf50Q6ZRC1 276 aa16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 ALYREFQ86V81 257 aaKnown RBP16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 SUGP1Q8IWZ8 645 aaKnown RBP16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 MYCBPAPQ8TBZ2 947 aa16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 NXPE3Q969Y0 559 aa16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 SLC35C1Q96A29 364 aa16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 FUBP3Q96I24 572 aaKnown RBP eCLIP16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 CEP63Q96MT8 703 aa16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 NUP62CLQ9H1M0 184 aa16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 IL21Q9HBE4 155 aa16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 GDE1Q9NZC3 331 aa16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 MAGEC2Q9UBF1 373 aaPredicted RBP16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 ARMCX3Q9UH62 379 aaPredicted RBP16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 ANAPC1Q9H1A4 1944 aa16.41■□□□□ 0.22
CCNDBP1-203ENST00000562553 BICDL2A1A5D9 508 aa16.4■□□□□ 0.22
CCNDBP1-203ENST00000562553 PDGFBP01127 241 aaPredicted RBP16.4■□□□□ 0.22
CCNDBP1-203ENST00000562553 P4HA1P13674 534 aa16.4■□□□□ 0.22
CCNDBP1-203ENST00000562553 BDNFP23560 247 aa16.4■□□□□ 0.22
CCNDBP1-203ENST00000562553 FCARP24071 287 aa16.4■□□□□ 0.22
CCNDBP1-203ENST00000562553 GABRR2P28476 465 aa16.4■□□□□ 0.22
CCNDBP1-203ENST00000562553 MAGEA11P43364 429 aa16.4■□□□□ 0.22
CCNDBP1-203ENST00000562553 FAM78AQ5JUQ0 283 aa16.4■□□□□ 0.22
CCNDBP1-203ENST00000562553 FOXR2Q6PJQ5 311 aa16.4■□□□□ 0.22
CCNDBP1-203ENST00000562553 MTSS1LQ765P7 747 aa16.4■□□□□ 0.22
CCNDBP1-203ENST00000562553 FILIP1Q7Z7B0 1213 aa16.4■□□□□ 0.22
CCNDBP1-203ENST00000562553 SCN4BQ8IWT1 228 aa16.4■□□□□ 0.22
CCNDBP1-203ENST00000562553 B3GALNT2Q8NCR0 500 aa16.4■□□□□ 0.22
CCNDBP1-203ENST00000562553 GPT2Q8TD30 523 aa16.4■□□□□ 0.22
CCNDBP1-203ENST00000562553 MED15Q96RN5 788 aa16.4■□□□□ 0.22
CCNDBP1-203ENST00000562553 BCO2Q9BYV7 579 aa16.4■□□□□ 0.22
CCNDBP1-203ENST00000562553 PLA2G2FQ9BZM2 168 aa16.4■□□□□ 0.22
CCNDBP1-203ENST00000562553 IMPG2Q9BZV3 1241 aa16.4■□□□□ 0.22
CCNDBP1-203ENST00000562553 NCANO14594 1321 aa16.4■□□□□ 0.22
CCNDBP1-203ENST00000562553 CLDN5O00501 218 aa16.39■□□□□ 0.21
CCNDBP1-203ENST00000562553 STX10O60499 249 aa16.39■□□□□ 0.21
CCNDBP1-203ENST00000562553 NDST1P52848 882 aa16.39■□□□□ 0.21
CCNDBP1-203ENST00000562553 CACNA2D1P54289 1103 aa16.39■□□□□ 0.21
CCNDBP1-203ENST00000562553 RPL10AP62906 217 aaKnown RBP16.39■□□□□ 0.21
CCNDBP1-203ENST00000562553 CYP4F8P98187 520 aa16.39■□□□□ 0.21
CCNDBP1-203ENST00000562553 MAPRE1Q15691 268 aaKnown RBP16.39■□□□□ 0.21
CCNDBP1-203ENST00000562553 CCDC40Q4G0X9 1142 aa16.39■□□□□ 0.21
CCNDBP1-203ENST00000562553 IER5LQ5T953 404 aa16.39■□□□□ 0.21
CCNDBP1-203ENST00000562553 TANGO2Q6ICL3 276 aa16.39■□□□□ 0.21
CCNDBP1-203ENST00000562553 FRMD5Q7Z6J6 570 aa16.39■□□□□ 0.21
CCNDBP1-203ENST00000562553 TMEM150AQ86TG1 271 aa16.39■□□□□ 0.21
CCNDBP1-203ENST00000562553 FBXL13Q8NEE6 735 aa16.39■□□□□ 0.21
CCNDBP1-203ENST00000562553 ASB16Q96NS5 453 aa16.39■□□□□ 0.21
CCNDBP1-203ENST00000562553 TWNKQ96RR1 684 aa16.39■□□□□ 0.21
CCNDBP1-203ENST00000562553 B3GNT5Q9BYG0 378 aa16.39■□□□□ 0.21
CCNDBP1-203ENST00000562553 ZNF518BQ9C0D4 1074 aa16.39■□□□□ 0.21
CCNDBP1-203ENST00000562553 NIF3L1Q9GZT8 377 aa16.39■□□□□ 0.21
CCNDBP1-203ENST00000562553 ATXN3LQ9H3M9 355 aa16.39■□□□□ 0.21
CCNDBP1-203ENST00000562553 TMEM30AQ9NV96 361 aa16.39■□□□□ 0.21
CCNDBP1-203ENST00000562553 RAB20Q9NX57 234 aa16.39■□□□□ 0.21
CCNDBP1-203ENST00000562553 MAGED2Q9UNF1 606 aaPredicted RBP16.39■□□□□ 0.21
CCNDBP1-203ENST00000562553 COL4A3Q01955 1670 aa16.38■□□□□ 0.21
CCNDBP1-203ENST00000562553 SLC38A8A6NNN8 435 aa16.38■□□□□ 0.21
CCNDBP1-203ENST00000562553 NOL4O94818 638 aa16.38■□□□□ 0.21
CCNDBP1-203ENST00000562553 CFHP08603 1231 aa16.38■□□□□ 0.21
CCNDBP1-203ENST00000562553 SRFP11831 508 aa16.38■□□□□ 0.21
CCNDBP1-203ENST00000562553 MRE11P49959 708 aa16.38■□□□□ 0.21
CCNDBP1-203ENST00000562553 NUBP1P53384 320 aa16.38■□□□□ 0.21
CCNDBP1-203ENST00000562553 TAF12Q16514 161 aa16.38■□□□□ 0.21
CCNDBP1-203ENST00000562553 ACOT1Q86TX2 421 aa16.38■□□□□ 0.21
CCNDBP1-203ENST00000562553 PRSS33Q8NF86 280 aa16.38■□□□□ 0.21
CCNDBP1-203ENST00000562553 ZSCAN18Q8TBC5 510 aaPredicted RBP16.38■□□□□ 0.21
CCNDBP1-203ENST00000562553 SRRTQ9BXP5 876 aaKnown RBP16.38■□□□□ 0.21
CCNDBP1-203ENST00000562553 SLITRK6Q9H5Y7 841 aa16.38■□□□□ 0.21
CCNDBP1-203ENST00000562553 METTL14Q9HCE5 456 aaKnown RBP16.38■□□□□ 0.21
CCNDBP1-203ENST00000562553 COQ4Q9Y3A0 265 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms