RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 FSTL4Q6MZW2 842 aa17.93■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 ADGRF2Q8IZF7 708 aa17.93■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 GPD1LQ8N335 351 aa17.93■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 TOP6BLQ8N6T0 577 aa17.93■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 PDILTQ8N807 584 aa17.93■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 MRPS31Q92665 395 aaKnown RBP17.93■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 TRMT2BQ96GJ1 504 aaKnown RBP17.93■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 MYRFLQ96LU7 910 aa17.93■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 TMEM206Q9H813 350 aa17.93■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 SEMA4GQ9NTN9 838 aa17.93■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 NCOR2Q9Y618 2525 aa17.92■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 SOBPA7XYQ1 873 aa17.92■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 LRP3O75074 770 aa17.92■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 RPL10AP62906 217 aaKnown RBP17.92■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 RBP5P82980 135 aa17.92■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 ZNF268Q14587 947 aaPredicted RBP17.92■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 CFAP221Q4G0U5 840 aa17.92■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.92■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 WDR5BQ86VZ2 330 aa17.92■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 OR5B17Q8NGF7 314 aa17.92■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 HPS3Q969F9 1004 aa17.92■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 SLC22A12Q96S37 553 aa17.92■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 RTKNQ9BST9 563 aa17.92■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 FBRSL1Q9HCM7 1045 aaKnown RBP17.92■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 ZNF638Q14966 1978 aaKnown RBP17.91■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 DCDC2BA2VCK2 349 aa17.91■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 TRDMT1O14717 391 aaKnown RBP17.91■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 ATP2C2O75185 946 aa17.91■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 TMEM191BP0C7N4 346 aa17.91■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 HOXD13P35453 343 aa17.91■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 PXNP49023 591 aaPredicted RBP17.91■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 NASPP49321 788 aaPredicted RBP17.91■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 NAIF1Q69YI7 327 aaPredicted RBP17.91■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 LIMS2Q7Z4I7 341 aa17.91■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 FAM160A2Q8N612 972 aaPredicted RBP17.91■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 SPATA18Q8TC71 538 aa17.91■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 KBTBD7Q8WVZ9 684 aa17.91■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 INTS4Q96HW7 963 aaKnown RBP17.91■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 CYP2S1Q96SQ9 504 aa17.91■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 INTS13Q9NVM9 706 aa17.91■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 UXTQ9UBK9 157 aaPredicted RBP17.91■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 EGFP01133 1207 aa17.9■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 LMO2P25791 158 aa17.9■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 LHX1P48742 406 aa17.9■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 FAM160A1Q05DH4 1040 aa17.9■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 GRSF1Q12849 480 aaKnown RBP eCLIP17.9■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 MTF1Q14872 753 aa17.9■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 ZNF77Q15935 545 aa17.9■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 E2F4Q16254 413 aa17.9■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 CSRP2Q16527 193 aa17.9■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 CC2D1AQ6P1N0 951 aaPredicted RBP17.9■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 FAM171BQ6P995 826 aa17.9■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 PRR23CQ6ZRP0 262 aa17.9■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 CBWD2Q8IUF1 395 aa17.9■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 SPATA2LQ8IUW3 424 aaPredicted RBP17.9■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 CCDC65Q8IXS2 484 aa17.9■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 FUBP3Q96I24 572 aaKnown RBP eCLIP17.9■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 TRPC7Q9HCX4 862 aa17.9■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 FOXD4L1Q9NU39 408 aa17.9■□□□□ 0.46
VPS9D1-AS1-201ENST00000562298 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.89■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 KIAA0391O15091 583 aaKnown RBP17.89■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 RNF40O75150 1001 aa17.89■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 PCSK1P29120 753 aa17.89■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 GJA4P35212 333 aa17.89■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 GALK1P51570 392 aa17.89■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 PSMC1P62191 440 aaKnown RBP17.89■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 MYO1EQ12965 1108 aa17.89■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 USP4Q13107 963 aa17.89■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 PDGFRLQ15198 375 aa17.89■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 CEP68Q76N32 757 aa17.89■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 SCN4BQ8IWT1 228 aa17.89■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 LINC00301Q8NCQ3 95 aa17.89■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 NETO1Q8TDF5 533 aa17.89■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 HPDLQ96IR7 371 aa17.89■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 ANKRD36BP1Q96IX9 119 aa17.89■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 TNMDQ9H2S6 317 aa17.89■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 ZSCAN16Q9H4T2 348 aaPredicted RBP17.89■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 CRTAC1Q9NQ79 661 aa17.89■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 KBTBD4Q9NVX7 518 aa17.89■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 POLR3BQ9NW08 1133 aaPredicted RBP17.89■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 HSPBP1Q9NZL4 362 aa17.89■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 GREB1Q4ZG55 1949 aa17.89■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 ANAPC1Q9H1A4 1944 aa17.88■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 TRAV19A0A0A6YYK7 116 aa17.88■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 C2orf78A6NCI8 922 aa17.88■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 ZNF233A6NK53 670 aa17.88■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 STX6O43752 255 aa17.88■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 GDF9O60383 454 aa17.88■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 CKMP06732 381 aa17.88■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 MAGEA11P43364 429 aa17.88■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 DPH6Q7L8W6 267 aa17.88■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 ARL14EPQ8N8R7 260 aaPredicted RBP17.88■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 TTC16Q8NEE8 873 aa17.88■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 OSCP1Q8WVF1 389 aa17.88■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 GAB3Q8WWW8 586 aa17.88■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 EZH1Q92800 747 aaPredicted RBP17.88■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 MYLPFQ96A32 169 aa17.88■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 SYT15Q9BQS2 421 aa17.88■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 TRIM9Q9C026 710 aa17.88■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 ECT2Q9H8V3 914 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms