RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 KRT7P08729 469 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 DARSP14868 501 aaKnown RBP10.34□□□□□ -0.75
SMG1-205ENST00000561947 KLRC2P26717 231 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 LSP1P33241 339 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 CHKAP35790 457 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 CDKN2BP42772 138 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 MAGOHP61326 146 aaKnown RBP10.34□□□□□ -0.75
SMG1-205ENST00000561947 PPP2R2AP63151 447 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 HADHQ16836 314 aaKnown RBP10.34□□□□□ -0.75
SMG1-205ENST00000561947 CST9Q5W186 159 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 LCLAT1Q6UWP7 414 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 ARFGAP1Q8N6T3 406 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 PPP1R13LQ8WUF5 828 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 LENG1Q96BZ8 264 aaPredicted RBP10.34□□□□□ -0.75
SMG1-205ENST00000561947 ACSF2Q96CM8 615 aaPredicted RBP10.34□□□□□ -0.75
SMG1-205ENST00000561947 NT5C1AQ9BXI3 368 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 EIF2AQ9BY44 585 aaKnown RBP10.34□□□□□ -0.75
SMG1-205ENST00000561947 CXCL16Q9H2A7 254 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 CDC42EP4Q9H3Q1 356 aaKnown RBP10.34□□□□□ -0.75
SMG1-205ENST00000561947 SLC12A6Q9UHW9 1150 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 ANAPC5Q9UJX4 755 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 CYP3A5P20815 502 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 VPS41P49754 854 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 PSEN2P49810 448 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 YARSP54577 528 aaKnown RBP10.33□□□□□ -0.76
SMG1-205ENST00000561947 HUNKP57058 714 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 BYSLQ13895 437 aaKnown RBP10.33□□□□□ -0.76
SMG1-205ENST00000561947 SKIDA1Q1XH10 827 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 EMC1Q8N766 993 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 UBA3Q8TBC4 463 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 BCAS4Q8TDM0 211 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 IPO4Q8TEX9 1081 aaKnown RBP10.33□□□□□ -0.76
SMG1-205ENST00000561947 PGM2Q96G03 612 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 ZMAT2Q96NC0 199 aaKnown RBP10.33□□□□□ -0.76
SMG1-205ENST00000561947 DNPEPQ9ULA0 475 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 C3orf70A6NLC5 250 aaPredicted RBP10.33□□□□□ -0.76
SMG1-205ENST00000561947 DCDC2CA8MYV0 355 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 HAS3O00219 553 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 ADAM17P78536 824 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 HIC1Q14526 733 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 STILQ15468 1287 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 TAF1CQ15572 869 aaPredicted RBP10.33□□□□□ -0.76
SMG1-205ENST00000561947 ZBTB6Q15916 424 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 IZUMO3Q5VZ72 239 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 DPH6Q7L8W6 267 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 GSTA5Q7RTV2 222 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 RASAL3Q86YV0 1011 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 CCHCR1Q8TD31 782 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 USP6NLQ92738 828 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 ZWILCHQ9H900 591 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 TSPAN16Q9UKR8 245 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 DRG1Q9Y295 367 aaKnown RBP10.33□□□□□ -0.76
SMG1-205ENST00000561947 EFR3BQ9Y2G0 817 aa10.33□□□□□ -0.76
SMG1-205ENST00000561947 SRRM3A6NNA2 597 aaPredicted RBP10.32□□□□□ -0.76
SMG1-205ENST00000561947 PPEF2O14830 753 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 IL1R2P27930 398 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 AXLP30530 894 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 CPT1AP50416 773 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 IRX5P78411 483 aaPredicted RBP10.32□□□□□ -0.76
SMG1-205ENST00000561947 PTGISQ16647 500 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 C6orf118Q5T5N4 469 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 ALLCQ8N6M5 410 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 LRRC52Q8N7C0 313 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 BEST2Q8NFU1 509 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 UHMK1Q8TAS1 419 aaKnown RBP10.32□□□□□ -0.76
SMG1-205ENST00000561947 MRPL45Q9BRJ2 306 aaKnown RBP10.32□□□□□ -0.76
SMG1-205ENST00000561947 CNTN3Q9P232 1028 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 TUBGCP4Q9UGJ1 667 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 TLDC2A0PJX2 215 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 MANSC4A6NHS7 340 aaPredicted RBP10.32□□□□□ -0.76
SMG1-205ENST00000561947 VCPP55072 806 aaKnown RBP10.32□□□□□ -0.76
SMG1-205ENST00000561947 ACAP1Q15027 740 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 OASLQ15646 514 aaKnown RBP10.32□□□□□ -0.76
SMG1-205ENST00000561947 CCL14Q16627 93 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 TAZQ16635 292 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 SMTNL2Q2TAL5 461 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 GOLGA7BQ2TAP0 167 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 FAM102AQ5T9C2 384 aaPredicted RBP10.32□□□□□ -0.76
SMG1-205ENST00000561947 ALKAL1Q6UXT8 129 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 DNAJB3Q8WWF6 145 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 NKD2Q969F2 451 aaPredicted RBP10.32□□□□□ -0.76
SMG1-205ENST00000561947 DDX23Q9BUQ8 820 aaKnown RBP10.32□□□□□ -0.76
SMG1-205ENST00000561947 TRIM6Q9C030 488 aaPredicted RBP10.32□□□□□ -0.76
SMG1-205ENST00000561947 MIS12Q9H081 205 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 EPN3Q9H201 632 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 NXF3Q9H4D5 531 aaKnown RBP10.32□□□□□ -0.76
SMG1-205ENST00000561947 RABEP2Q9H5N1 569 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 RSPH14Q9UHP6 348 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 ZNF148Q9UQR1 794 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 HES2Q9Y543 173 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 SNX9Q9Y5X1 595 aa10.32□□□□□ -0.76
SMG1-205ENST00000561947 SMIM23A6NLE4 172 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 RGS16O15492 202 aaPredicted RBP10.31□□□□□ -0.76
SMG1-205ENST00000561947 RECQL4O94761 1208 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 PFKMP08237 780 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 MYL3P08590 195 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 KDELR1P24390 212 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 SNX17Q15036 470 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 P3H1Q32P28 736 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 HIBCHQ6NVY1 386 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms