RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 MAGEC2Q9UBF1 373 aaPredicted RBP25.46■■□□□ 1.67
CDR2-202ENST00000561630 CACNA1HO95180 2353 aa25.46■■□□□ 1.67
CDR2-202ENST00000561630 GALR2O43603 387 aaPredicted RBP25.45■■□□□ 1.66
CDR2-202ENST00000561630 RFX1P22670 979 aa25.45■■□□□ 1.66
CDR2-202ENST00000561630 PRCPP42785 496 aa25.45■■□□□ 1.66
CDR2-202ENST00000561630 NHLH1Q02575 133 aa25.45■■□□□ 1.66
CDR2-202ENST00000561630 PRKCQQ04759 706 aa25.45■■□□□ 1.66
CDR2-202ENST00000561630 GRM2Q14416 872 aa25.45■■□□□ 1.66
CDR2-202ENST00000561630 MLF2Q15773 248 aaPredicted RBP25.45■■□□□ 1.66
CDR2-202ENST00000561630 SGSM1Q2NKQ1 1148 aa25.45■■□□□ 1.66
CDR2-202ENST00000561630 ZNF667Q5HYK9 610 aa25.45■■□□□ 1.66
CDR2-202ENST00000561630 TMEM150AQ86TG1 271 aa25.45■■□□□ 1.66
CDR2-202ENST00000561630 ARID3BQ8IVW6 561 aaPredicted RBP25.45■■□□□ 1.66
CDR2-202ENST00000561630 DEPDC1BQ8WUY9 529 aa25.45■■□□□ 1.66
CDR2-202ENST00000561630 ERCC4Q92889 916 aaPredicted RBP25.45■■□□□ 1.66
CDR2-202ENST00000561630 GTPBP4Q9BZE4 634 aaKnown RBP25.45■■□□□ 1.66
CDR2-202ENST00000561630 TASP1Q9H6P5 420 aa25.45■■□□□ 1.66
CDR2-202ENST00000561630 HEPACAM2A8MVW5 462 aa25.44■■□□□ 1.66
CDR2-202ENST00000561630 NOL4O94818 638 aa25.44■■□□□ 1.66
CDR2-202ENST00000561630 F11P03951 625 aa25.44■■□□□ 1.66
CDR2-202ENST00000561630 KRT13P13646 458 aa25.44■■□□□ 1.66
CDR2-202ENST00000561630 WEE1P30291 646 aa25.44■■□□□ 1.66
CDR2-202ENST00000561630 NLRP12P59046 1061 aa25.44■■□□□ 1.66
CDR2-202ENST00000561630 MCCD1P59942 119 aaPredicted RBP25.44■■□□□ 1.66
CDR2-202ENST00000561630 CYP4F8P98187 520 aa25.44■■□□□ 1.66
CDR2-202ENST00000561630 VSTM1Q6UX27 236 aa25.44■■□□□ 1.66
CDR2-202ENST00000561630 MFSD6LQ8IWD5 586 aa25.44■■□□□ 1.66
CDR2-202ENST00000561630 STKLD1Q8NE28 680 aa25.44■■□□□ 1.66
CDR2-202ENST00000561630 TAF4BQ92750 862 aa25.44■■□□□ 1.66
CDR2-202ENST00000561630 DNASE1L2Q92874 299 aa25.44■■□□□ 1.66
CDR2-202ENST00000561630 RSPRY1Q96DX4 576 aa25.44■■□□□ 1.66
CDR2-202ENST00000561630 PCED1BQ96HM7 432 aa25.44■■□□□ 1.66
CDR2-202ENST00000561630 MYRFLQ96LU7 910 aa25.44■■□□□ 1.66
CDR2-202ENST00000561630 DDX23Q9BUQ8 820 aaKnown RBP25.44■■□□□ 1.66
CDR2-202ENST00000561630 SMYD3Q9H7B4 428 aa25.44■■□□□ 1.66
CDR2-202ENST00000561630 BRD9Q9H8M2 597 aa25.44■■□□□ 1.66
CDR2-202ENST00000561630 ZMYM5Q9UJ78 669 aa25.44■■□□□ 1.66
CDR2-202ENST00000561630 PIEZO1Q92508 2521 aa25.43■■□□□ 1.66
CDR2-202ENST00000561630 NCANO14594 1321 aa25.43■■□□□ 1.66
CDR2-202ENST00000561630 A8MXQ7 604 aa25.43■■□□□ 1.66
CDR2-202ENST00000561630 KINO60870 393 aaKnown RBP25.43■■□□□ 1.66
CDR2-202ENST00000561630 GADD45BO75293 160 aaPredicted RBP25.43■■□□□ 1.66
CDR2-202ENST00000561630 PTPN1P18031 435 aaKnown RBP25.43■■□□□ 1.66
CDR2-202ENST00000561630 MDH1BQ5I0G3 518 aa25.43■■□□□ 1.66
CDR2-202ENST00000561630 SCN4BQ8IWT1 228 aa25.43■■□□□ 1.66
CDR2-202ENST00000561630 TRMT2BQ96GJ1 504 aaKnown RBP25.43■■□□□ 1.66
CDR2-202ENST00000561630 TRPV5Q9NQA5 729 aa25.43■■□□□ 1.66
CDR2-202ENST00000561630 MAGED2Q9UNF1 606 aaPredicted RBP25.43■■□□□ 1.66
CDR2-202ENST00000561630 SLC38A8A6NNN8 435 aa25.42■■□□□ 1.66
CDR2-202ENST00000561630 ASS1P00966 412 aaKnown RBP25.42■■□□□ 1.66
CDR2-202ENST00000561630 TRIM49P0CI25 452 aa25.42■■□□□ 1.66
CDR2-202ENST00000561630 TRIM49CP0CI26 452 aa25.42■■□□□ 1.66
CDR2-202ENST00000561630 P4HA1P13674 534 aa25.42■■□□□ 1.66
CDR2-202ENST00000561630 BDNFP23560 247 aa25.42■■□□□ 1.66
CDR2-202ENST00000561630 CDH8P55286 799 aa25.42■■□□□ 1.66
CDR2-202ENST00000561630 CYP27A1Q02318 531 aa25.42■■□□□ 1.66
CDR2-202ENST00000561630 CCDC105Q8IYK2 499 aa25.42■■□□□ 1.66
CDR2-202ENST00000561630 IRF7Q92985 503 aa25.42■■□□□ 1.66
CDR2-202ENST00000561630 ELMO3Q96BJ8 720 aa25.42■■□□□ 1.66
CDR2-202ENST00000561630 SPATA17Q96L03 361 aa25.42■■□□□ 1.66
CDR2-202ENST00000561630 CEP295NLQ96MC4 621 aa25.42■■□□□ 1.66
CDR2-202ENST00000561630 SLC46A2Q9BY10 475 aa25.42■■□□□ 1.66
CDR2-202ENST00000561630 DPEP3Q9H4B8 488 aa25.42■■□□□ 1.66
CDR2-202ENST00000561630 OBP2AQ9NY56 170 aa25.42■■□□□ 1.66
CDR2-202ENST00000561630 UXTQ9UBK9 157 aaPredicted RBP25.42■■□□□ 1.66
CDR2-202ENST00000561630 SIT1Q9Y3P8 196 aa25.42■■□□□ 1.66
CDR2-202ENST00000561630 CETN3O15182 167 aa25.41■■□□□ 1.66
CDR2-202ENST00000561630 CLSTN1O94985 981 aa25.41■■□□□ 1.66
CDR2-202ENST00000561630 HLA-DRAP01903 254 aa25.41■■□□□ 1.66
CDR2-202ENST00000561630 GDI1P31150 447 aa25.41■■□□□ 1.66
CDR2-202ENST00000561630 GCLMP48507 274 aa25.41■■□□□ 1.66
CDR2-202ENST00000561630 PPP3CAQ08209 521 aa25.41■■□□□ 1.66
CDR2-202ENST00000561630 FCHO2Q0JRZ9 810 aa25.41■■□□□ 1.66
CDR2-202ENST00000561630 ADSSL1Q8N142 457 aa25.41■■□□□ 1.66
CDR2-202ENST00000561630 B3GALNT2Q8NCR0 500 aa25.41■■□□□ 1.66
CDR2-202ENST00000561630 EEF2KMTQ96G04 330 aa25.41■■□□□ 1.66
CDR2-202ENST00000561630 FOXQ1Q9C009 403 aa25.41■■□□□ 1.66
CDR2-202ENST00000561630 CHMP5Q9NZZ3 219 aa25.41■■□□□ 1.66
CDR2-202ENST00000561630 KANSL1LA0AUZ9 987 aa25.4■■□□□ 1.66
CDR2-202ENST00000561630 SOBPA7XYQ1 873 aa25.4■■□□□ 1.66
CDR2-202ENST00000561630 ZNF263O14978 683 aa25.4■■□□□ 1.66
CDR2-202ENST00000561630 DDX6P26196 483 aaKnown RBP eCLIP25.4■■□□□ 1.66
CDR2-202ENST00000561630 GRIK1P39086 918 aa25.4■■□□□ 1.66
CDR2-202ENST00000561630 PIK3CAP42336 1068 aa25.4■■□□□ 1.66
CDR2-202ENST00000561630 RAP1GAPP47736 663 aa25.4■■□□□ 1.66
CDR2-202ENST00000561630 SCARA5Q6ZMJ2 495 aa25.4■■□□□ 1.66
CDR2-202ENST00000561630 GPIHBP1Q8IV16 184 aa25.4■■□□□ 1.66
CDR2-202ENST00000561630 CMTM8Q8IZV2 173 aa25.4■■□□□ 1.66
CDR2-202ENST00000561630 DTWD2Q8NBA8 298 aa25.4■■□□□ 1.66
CDR2-202ENST00000561630 PJA1Q8NG27 643 aa25.4■■□□□ 1.66
CDR2-202ENST00000561630 LRRC3BQ96PB8 259 aa25.4■■□□□ 1.66
CDR2-202ENST00000561630 SDCBP2Q9H190 292 aa25.4■■□□□ 1.66
CDR2-202ENST00000561630 IRF2BPLQ9H1B7 796 aa25.4■■□□□ 1.66
CDR2-202ENST00000561630 HEBP1Q9NRV9 189 aa25.4■■□□□ 1.66
CDR2-202ENST00000561630 ARNTLO00327 626 aa25.39■■□□□ 1.66
CDR2-202ENST00000561630 DPYSL4O14531 572 aa25.39■■□□□ 1.66
CDR2-202ENST00000561630 PRAMEF12O95522 483 aa25.39■■□□□ 1.66
CDR2-202ENST00000561630 EPB41P11171 864 aaKnown RBP25.39■■□□□ 1.66
CDR2-202ENST00000561630 GTF2H1P32780 548 aa25.39■■□□□ 1.66
CDR2-202ENST00000561630 TPRG1Q6ZUI0 275 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms